\usepackage{algorithm}
\usepackage{algpseudocode}
\usepackage{multirow}
+\usepackage{authblk}
\algnewcommand\algorithmicinput{\textbf{Input:}}
\algnewcommand\Input{\item[\algorithmicinput]}
\def\changemargin#1#2{\list{}{\rightmargin#2\leftmargin#1}\item[]}
\let\endchangemargin=\endlist
-\title{A scalable multisplitting algorithm for solving large sparse linear systems}
+\title{A scalable multisplitting algorithm to solve large sparse linear systems}
\date{}
-
-
+\author[1]{Raphaël Couturier}
+\author[2]{ Lilia Ziane Khodja}
+\affil[1]{ Femto-ST Institute\\
+ University of Franche Comte\\
+ France\\
+ email: raphael.couturier@univ-fcomte.fr}
+\affil[2]{Inria Bordeaux Sud-Ouest\\
+ France\\
+ email: lilia.ziane@inria.fr}
\begin{document}
-\author{Raphaël Couturier \and Lilia Ziane Khodja}
+
\maketitle
order to improve the convergence. Some large scale experiments with a 3D Poisson
problem are presented with up to 8,192 cores. They show the obtained
improvements compared to a classical GMRES both in terms of number of iterations
-and execution times.
+and in terms of execution times.
\end{abstract}
%%%%%%%%%%%%%%%%%%%%%%%%
\section{Introduction}
Iterative methods are used to solve large sparse linear systems of equations of
the form $Ax=b$ because they are easier to parallelize than direct ones. Many
-iterative methods have been proposed and adapted by many researchers. For
+iterative methods have been proposed and adapted by different researchers. For
example, the GMRES method and the Conjugate Gradient method are very well known
-and used by many researchers~\cite{S96}. Both methods are based on the
+and used~\cite{S96}. Both methods are based on the
Krylov subspace which consists in forming a basis of a sequence of successive
matrix powers times the initial residual.
distant clusters interconnected by a high-latency network. It is therefore
imperative to develop coarse-grain based algorithms to reduce the communications
in the parallel iterative solvers. Two possible solutions consists either in
-using asynchronous iterative methods~\cite{ref18} or to use multisplitting
-algorithms. In this paper, we will reconsider the use of a multisplitting
+using asynchronous iterative methods~\cite{ref18} or in using multisplitting
+algorithmss. In this paper, we will reconsider the use of a multisplitting
method. In opposition to traditional multisplitting method that suffer from slow
convergence, as proposed in~\cite{huang1993krylov}, the use of a minimization
process can drastically improve the convergence.
The present paper is organized as follows. First, Section~\ref{sec:02} presents
some related works and the principle of multisplitting methods. Then, in
-Section~\ref{sec:03} is presented the algorithm of our Krylov multisplitting
-method based on inner-outer iterations. Finally, in Section~\ref{sec:04}, the
+Section~\ref{sec:03} the algorithm of our Krylov multisplitting
+method, based on inner-outer iterations, is presented. Finally, in Section~\ref{sec:04}, the
parallel experiments on Hector architecture show the performances of the Krylov
multisplitting algorithm compared to the classical GMRES algorithm to solve a 3D
Poisson problem.
\section{Related works and presentation of the multisplitting method}
\label{sec:02}
-A general framework for studying parallel multisplitting has been presented in~\cite{o1985multi}
+A general framework to study parallel multisplitting methods has been presented in~\cite{o1985multi}
by O'Leary and White. Convergence conditions are given for the
-most general case. Many authors improved multisplitting algorithms by proposing
-for example an asynchronous version~\cite{bru1995parallel} and convergence
-conditions~\cite{bai1999block,bahi2000asynchronous} in this case or other
+most general cases. Many authors have improved multisplitting algorithms by proposing,
+for example, an asynchronous version~\cite{bru1995parallel} or convergence
+conditions~\cite{bai1999block,bahi2000asynchronous} or other
two-stage algorithms~\cite{frommer1992h,bru1995parallel}.
-In~\cite{huang1993krylov}, the authors proposed a parallel multisplitting
+In~\cite{huang1993krylov}, the authors have proposed a parallel multisplitting
algorithm in which all the tasks except one are devoted to solve a sub-block of
the splitting and to send their local solutions to the first task which is in
-charge to combine the vectors at each iteration. These vectors form a Krylov
+charge of combining the vectors at each iteration. These vectors form a Krylov
basis for which the first task minimizes the error function over the basis to
-increase the convergence, then the other tasks receive the updated solution until
+increase the convergence, then the other tasks receive the updated solution until the
convergence of the global system.
-In~\cite{couturier2008gremlins}, the authors proposed practical implementations
+In~\cite{couturier2008gremlins}, the authors have developed practical implementations
of multisplitting algorithms to solve large scale linear systems. Inner solvers
could be based on sequential direct method with the LU method or sequential iterative
one with GMRES.
-In~\cite{prace-multi}, the authors have proposed a parallel multisplitting
+In~\cite{prace-multi}, the authors have designed a parallel multisplitting
algorithm in which large blocks are solved using a GMRES solver. The authors have
performed large scale experiments up-to 32,768 cores and they conclude that
-asynchronous multisplitting algorithm could be more efficient than traditional
+an asynchronous multisplitting algorithm could be more efficient than traditional
solvers on an exascale architecture with hundreds of thousands of cores.
-So compared to these works, we propose in this paper a practical multisplitting method based on parallel iterative blocks and gives better results than classical GMRES method for the 3D Poisson problem we considered.
+So, compared to these works, we propose in this paper a practical multisplitting method based on parallel iterative blocks which gives better results than classical GMRES method for the 3D Poisson problem we considered.
\\
The key idea of a multisplitting method to solve a large system of linear equations $Ax=b$ is defined as follows. The first step consists in partitioning the matrix $A$ in $L$ several ways
A = M_\ell - N_\ell,
\label{eq01}
\end{equation}
-where for all $\ell\in\{1,\ldots,L\}$ $M_\ell$ are non-singular matrices. Then the linear system is solved by iteration based on the obtained splittings as follows
+where for all $\ell\in\{1,\ldots,L\}$ $M_\ell$ are non-singular matrices. Then the linear system is solved by an iteration based on the obtained splittings as follows
\begin{equation}
x^{k+1}=\displaystyle\sum^L_{\ell=1} E_\ell M^{-1}_\ell (N_\ell x^k + b),~k=1,2,3,\ldots
\label{eq02}
solved~\cite{o1985multi,ref18}. Furthermore, the splitting of the linear system
among several clusters of processors increases the spectral radius of the
iteration matrix, thereby slowing the convergence. In fact, the larger the
-number of splitting is, the larger the spectral radius is. In this paper, we
-based on the work presented in~\cite{huang1993krylov} to increase the
+number of splitting is, the larger the spectral radius is. In this paper, our
+work is based on the work presented in~\cite{huang1993krylov} to increase the
convergence and improve the scalability of the multisplitting methods.
In order to accelerate the convergence, we implemented the outer iteration of the multisplitting solver as a Krylov iterative method which minimizes some error function over a Krylov subspace~\cite{S96}. The Krylov subspace that we used is spanned by a basis composed of successive solutions issued from solving the $L$ splittings~(\ref{sec03:eq03})
S=\{x^1,x^2,\ldots,x^s\},~s\leq n,
\label{sec03:eq04}
\end{equation}
-where for $j\in\{1,\ldots,s\}$, $x^j=[X_1^j,\ldots,X_L^j]$ is a solution of the global linear system. The advantage of such a Krylov subspace is that we need neither an orthogonal basis nor synchronizations between clusters to generate this basis.
+where for $j\in\{1,\ldots,s\}$, $x^j=[X_1^j,\ldots,X_L^j]$ is a solution of the global linear system. The advantage of such a Krylov subspace is that we neither need an orthogonal basis nor any synchronization between clusters to generate this basis.
The multisplitting method is periodically restarted every $s$ iterations with a new initial guess $\tilde{x}=S\alpha$ which minimizes the error function $\|b-Ax\|_2$ over the Krylov subspace spanned by vectors of $S$. So $\alpha$ is defined as the solution of the large overdetermined linear system
\begin{equation}
\label{algo:01}
\end{algorithm}
-The main key points of our Krylov multisplitting method to solve a large sparse linear system are given in Algorithm~\ref{algo:01}. This algorithm is based on a two-stage method with a minimization using restarted GMRES iterative method as an inner solver. It is executed in parallel by each cluster of processors. Matrices and vectors with the subscript $\ell$ represent the local data for cluster $\ell$, where $\ell\in\{1,\ldots,L\}$. The two-stage solver uses two different parallel iterative algorithms: GMRES method to solve each splitting~(\ref{sec03:eq03}) on a cluster of processors, and CGNR method executed in parallel by all clusters to minimize the function error~(\ref{sec03:eq07}) over the Krylov subspace spanned by $S$. The algorithm requires two global synchronizations between $L$ clusters. The first one is performed at line~\ref{line12} in Algorithm~\ref{algo:01} to exchange local values of vector solution $x$ (i.e. the minimizer $\tilde{x}$) required to restart the multisplitting solver. The second one is needed to construct the matrix $R$. We chose to perform this latter synchronization $s$ times in every outer iteration $k$ (line~\ref{line7} in Algorithm~\ref{algo:01}). This is a straightforward way to compute the sparse matrix-dense matrix multiplication $R=AS$. We implemented all synchronizations by using message passing collective communications of MPI library.
+The main key points of our Krylov multisplitting method to solve a large sparse linear system are given in Algorithm~\ref{algo:01}. This algorithm is based on a two-stage method with a minimization using restarted GMRES iterative method as an inner solver. It is executed in parallel by each cluster of processors. Matrices and vectors with the subscript $\ell$ represent the local data for cluster $\ell$, where $\ell\in\{1,\ldots,L\}$. The two-stage solver uses two different parallel iterative algorithms: the GMRES method to solve each splitting~(\ref{sec03:eq03}) on a cluster of processors, and the CGNR method, executed in parallel by all clusters, to minimize the function error~(\ref{sec03:eq07}) over the Krylov subspace spanned by $S$. The algorithm requires two global synchronizations between $L$ clusters. The first one is performed line~\ref{line12} in Algorithm~\ref{algo:01} to exchange local values of vector solution $x$ (i.e. the minimizer $\tilde{x}$) required to restart the multisplitting solver. The second one is needed to construct the matrix $R$. We chose to perform this latter synchronization $s$ times in every outer iteration $k$ (line~\ref{line7} in Algorithm~\ref{algo:01}). This is a straightforward way to compute the sparse matrix-dense matrix multiplication $R=AS$. We implemented all synchronizations by using message passing collective communications of MPI library.
%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%
\section{Experiments}
\label{sec:04}
-In order to illustrate the interest of our algorithm. We have compared our
-algorithm with the GMRES method which is a very well used method in many
+In order to illustrate the interest of our algorithm, we have compared our
+algorithm with the GMRES method which is a commonly used method in many
situations. We have chosen to focus on only one problem which is very simple to
implement: a 3 dimension Poisson problem.
preconditioners are not scalable when using many cores.
%Doing many experiments with many cores is not easy and requires to access to a supercomputer with several hours for developing a code and then improving it.
-In the following we present some experiments we could achieved out on the Hector
+In the following we present some experiments we could achieve out on the Hector
architecture, a UK's high-end computing resource, funded by the UK Research
Councils~\cite{hector}. This is a Cray XE6 supercomputer, equipped with two
16-core AMD Opteron 2.3 Ghz and 32 GB of memory. Machines are interconnected
Table~\ref{tab1} shows the result of the experiments. The first column shows
the size of the 3D Poisson problem. The size is chosen in order to have
approximately 50,000 components per core. The second column represents the
-number of cores used. In parenthesis, there is the decomposition used for the
+number of cores used. In brackets, one can find the decomposition used for the
Krylov multisplitting. The third column and the sixth column respectively show
the execution time for the GMRES and the Krylov multisplitting codes. The fourth
-and the seventh column describes the number of iterations. For the
+and the seventh column describe the number of iterations. For the
multisplitting code, the total number of inner iterations is represented in
-parenthesis. For the GMRES code (alone and in the multisplitting version) the
+brackets. For the GMRES code (alone and in the multisplitting version) the
restart parameter is fixed to 16. The precision of the GMRES version is fixed to
1e-6. For the multisplitting, there are two precisions, one for the external
solver which is fixed to 1e-6 and another one for the inner solver (GMRES) which
\begin{table}[htbp]
\begin{center}
-\begin{changemargin}{-2.5cm}{0cm}
+\begin{changemargin}{-1.8cm}{0cm}
+\begin{small}
\begin{tabular}{|c|c||c|c|c||c|c|c||c|}
\hline
\multirow{2}{*}{Pb size}&\multirow{2}{*}{Nb. cores} & \multicolumn{3}{c||}{GMRES} & \multicolumn{3}{c||}{Krylov Multisplitting} & \multirow{2}{*}{Ratio}\\
\end{tabular}
\caption{Results}
\label{tab1}
+\end{small}
\end{changemargin}
\end{center}
\end{table}
From these experiments, it can be observed that the multisplitting version is
always faster than the GMRES version. The acceleration gain of the
-multisplitting version is between 4 and 6. It can be noticed that the number of
+multisplitting version ranges between 4 and 6. It can be noticed that the number of
iterations is drastically reduced with the multisplitting version even it is not
-neglectable. Moreover, with 8,192 cores, we can see that using 4 clusters gives
-better performance than simply using 2 clusters. In fact, we can remark that the
+negligible. Moreover, with 8,192 cores, we can see that using 4 clusters gives a
+better performance than simply using 2 clusters. In fact, we can notice that the
precision with 2 clusters is slightly better but in both cases the precision is
under the specified threshold.
performances to the classical GMRES method on a supercomputer composed of 2,048
to 8,192 cores. The experimental results showed that the multisplitting method is
about 4 to 6 times faster than the GMRES method for different sizes of the
-problem split into 2 or 4 blocks when using multisplitting method. Indeed, the
+problem split into 2 or 4 blocks when using the multisplitting method. Indeed, the
GMRES method has difficulties to scale with many cores while the Krylov
multisplitting method allows to hide latency and reduce the inter-cluster
communications.
-In future works, we plan to conduct experiments on larger number of cores and
+In future works, we plan to conduct experiments on larger numbers of cores and
test the scalability of our Krylov multisplitting method. It would be
interesting to validate its performances to solve other linear/nonlinear and
symmetric/nonsymmetric problems. Moreover, we intend to develop multisplitting
-methods based on asynchronous iteration in which communications are overlapped
+methods based on asynchronous iterations in which communications are overlapped
by computations. These methods would be interesting for platforms composed of
distant clusters interconnected by a high-latency network. In addition, we
intend to investigate the convergence improvements of our method by using
