+\@writefile{toc}{\author{Guillaume Laville}{}}
+\@writefile{toc}{\author{Christophe Lang}{}}
+\@writefile{toc}{\author{Kamel Mazouzi}{}}
+\@writefile{toc}{\author{Nicolas Marilleau}{}}
+\@writefile{toc}{\author{B\IeC {\'e}n\IeC {\'e}dicte Herrmann}{}}
+\@writefile{toc}{\author{Laurent Philippe}{}}
+\@writefile{loa}{\addvspace {10\p@ }}
+\@writefile{toc}{\contentsline {chapter}{\numberline {16}Implementing MAS on GPU}{363}}
+\@writefile{lof}{\addvspace {10\p@ }}
+\@writefile{lot}{\addvspace {10\p@ }}
+\newlabel{chapter17}{{16}{364}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.1}Introduction}{364}}
+\newlabel{ch17:intro}{{16.1}{364}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.2}Running Agent-Based Simulations}{365}}
+\newlabel{ch17:ABM}{{16.2}{365}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.2.1}Multi-agent systems and parallelism}{365}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.2.2}MAS Implementation on GPU}{367}}
+\newlabel{ch17:subsec:gpu}{{16.2.2}{367}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.3}A first practical example}{368}}
+\newlabel{ch17:sec:1stmodel}{{16.3}{368}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.3.1}The Collembola model}{368}}
+\newlabel{ch17:subsec:collembolamodel}{{16.3.1}{368}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.1}{\ignorespaces Evolution algorithm of Collembola model\relax }}{369}}
+\newlabel{ch17:fig:collem_algorithm}{{16.1}{369}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.3.2}Collembola Implementation}{369}}
+\newlabel{ch17:listing:collembola-diffuse}{{16.1}{370}}
+\@writefile{lol}{\contentsline {lstlisting}{\numberline {16.1}Collembola OpenCL Diffusion kernel}{370}}
+\newlabel{ch17:listing:collembola-reduc}{{16.2}{370}}
+\@writefile{lol}{\contentsline {lstlisting}{\numberline {16.2}Collembola OpenCL reduction kernel}{370}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.3.3}Collembola performance}{371}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.2}{\ignorespaces Performance of the Collembola model on CPU and GPU\relax }}{372}}
+\newlabel{ch17:fig:mior_perfs_collem}{{16.2}{372}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.4}Second example}{372}}
+\newlabel{ch17:sec:2ndmodel}{{16.4}{372}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.4.1}The MIOR model}{372}}
+\newlabel{ch17:subsec:miormodel}{{16.4.1}{372}}
+\@writefile{loa}{\contentsline {algocf}{\numberline {16}{\ignorespaces Evolution step of each Meta-Mior (microbial colony) agent\relax }}{373}}
+\newlabel{ch17:seqalgo}{{16}{373}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.4.2}MIOR Implementation}{373}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.3}{\ignorespaces Execution distribution retained on GPU\relax }}{374}}
+\newlabel{ch17:fig:gpu_distribution}{{16.3}{374}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.1}Execution mapping on GPU}{374}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.2}Data structures translation}{375}}
+\newlabel{ch17:subsec:datastructures}{{16.4.2.2}{375}}
+\newlabel{ch17:listing:mior_data_structures}{{16.3}{375}}
+\@writefile{lol}{\contentsline {lstlisting}{\numberline {16.3}Main data structures used in a MIOR simulation}{375}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.4}{\ignorespaces Compact representation of the topology of a MIOR simulation\relax }}{376}}
+\newlabel{ch17:fig:csr_representation}{{16.4}{376}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.3}Critical resources access management}{376}}
+\newlabel{ch17:subsec:concurrency}{{16.4.2.3}{376}}
+\newlabel{ch17:listing:mior_kernels}{{16.4}{377}}
+\@writefile{lol}{\contentsline {lstlisting}{\numberline {16.4}Main MIOR kernel}{377}}
+\newlabel{ch17:fig:mior_launcher}{{16.5}{378}}
+\@writefile{lol}{\contentsline {lstlisting}{\numberline {16.5}MIOR simulation launcher}{378}}
+\@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.4}Termination detection}{378}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.4.3}Performance of MIOR implementations}{379}}
+\newlabel{ch17:subsec:miorexperiments}{{16.4.3}{379}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.5}{\ignorespaces CPU and GPU performance on a Tesla C1060 node\relax }}{380}}
+\newlabel{ch17:fig:mior_perfs_tesla}{{16.5}{380}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.6}{\ignorespaces CPU and GPU performance on a personal computer with a Geforce 8800GT\relax }}{381}}
+\newlabel{ch17:fig:mior_perfs_8800gt}{{16.6}{381}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.5}Analysis and recommendations}{381}}
+\newlabel{ch17:analysis}{{16.5}{381}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.7}{\ignorespaces Execution time of one multi-simulation kernel on the Tesla platform\relax }}{382}}
+\newlabel{ch17:fig:monokernel_graph}{{16.7}{382}}
+\@writefile{lof}{\contentsline {figure}{\numberline {16.8}{\ignorespaces Total execution time for 1000 simulations on the Tesla platform, while varying the number of simulations for each kernel\relax }}{382}}
+\newlabel{ch17:fig:multikernel_graph}{{16.8}{382}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.5.1}Analysis}{382}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.5.2}MAS execution workflow}{383}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.5.3}Implementation challenges}{384}}
+\@writefile{toc}{\contentsline {subsection}{\numberline {16.5.4}MCSMA}{384}}
+\newlabel{ch17:Mcsma}{{16.5.4}{384}}
+\@writefile{toc}{\contentsline {section}{\numberline {16.6}Conclusion}{385}}
+\newlabel{ch17:conclusion}{{16.6}{385}}
+\@writefile{toc}{\contentsline {section}{Bibliography}{386}}
+\@setckpt{Chapters/chapter17/ch17}{
+\setcounter{page}{390}
+\setcounter{equation}{0}
+\setcounter{enumi}{3}
+\setcounter{enumii}{0}
+\setcounter{enumiii}{0}
+\setcounter{enumiv}{25}
+\setcounter{footnote}{1}
+\setcounter{mpfootnote}{0}
+\setcounter{part}{6}
+\setcounter{chapter}{16}
+\setcounter{section}{6}
+\setcounter{subsection}{0}
+\setcounter{subsubsection}{0}
+\setcounter{paragraph}{0}
+\setcounter{subparagraph}{0}
+\setcounter{figure}{8}
+\setcounter{table}{0}
+\setcounter{numauthors}{0}
+\setcounter{parentequation}{4}
+\setcounter{subfigure}{0}
+\setcounter{lofdepth}{1}
+\setcounter{subtable}{0}
+\setcounter{lotdepth}{1}
+\setcounter{lstnumber}{21}
+\setcounter{ContinuedFloat}{0}
+\setcounter{AlgoLine}{17}
+\setcounter{algocfline}{16}
+\setcounter{algocfproc}{16}
+\setcounter{algocf}{16}
+\setcounter{nprt@mantissa@digitsbefore}{0}
+\setcounter{nprt@mantissa@digitsafter}{0}
+\setcounter{nprt@exponent@digitsbefore}{0}
+\setcounter{nprt@exponent@digitsafter}{0}
+\setcounter{nprt@digitsfirstblock}{0}
+\setcounter{nprt@blockcnt}{0}
+\setcounter{nprt@cntprint}{0}
+\setcounter{proposition}{1}
+\setcounter{theorem}{0}
+\setcounter{exercise}{0}
+\setcounter{example}{0}
+\setcounter{definition}{0}
+\setcounter{proof}{1}
+\setcounter{lstlisting}{5}
+}
