\usepackage{algorithm}
\usepackage{algorithmic}
\usepackage{pdflscape}
+\usepackage{authblk}
+\usepackage[T1]{fontenc}
\usepackage{multirow,longtable}
\usepackage{amsmath,mathtools}
+\usepackage{amssymb}
+\usepackage[standard]{ntheorem}
+\usepackage{stmaryrd}
\usepackage[utf8]{inputenc}
-
+\usepackage{tikz}
+\usetikzlibrary{shapes,arrows}
% correct bad hyphenation here
\hyphenation{op-tical net-works semi-conduc-tor}
-
-\begin{document}
-\title{Finding the core-genes of Chloroplast Species}
+\title{Finding the Core-Genes of Plant Species Chloroplast}
+\author[1]{Bassam AlKindy} %\footnote{email: bassam.al-kindy@univ-fcomt\'{e}.fr}
+\author[1]{Jacques Bahi}
+\author[1]{Jean-Fran\c{c}ois Couchot}
+\author[1]{Christophe Guyeux}
+\author[2]{Arnaud Mouly}
+\author[1]{Michel Salomon}
+\affil[1]{FEMTO-ST Institute, UMR 6174 CNRS, Computer Science Department DISC, Universit\'{e} de Franche-Comt\'{e}, France}
+\affil[2]{Lab. Chrono-Environnement, UMR 6174 CNRS, Universit\'{e} de Franche-Comt\'{e}, France}
+%{\small \it Authors in alphabetic order}
+\renewcommand\Authands{ and }
+\begin{document}
-\author{
-Bassam AlKindy,
-Jean-Fran\c{c}ois Couchot,
-Christophe Guyeux,
-and Michel Salomon*\\
-FEMTO-ST Institute, UMR 6174 CNRS\\
-Computer Science Laboratory DISC,
-University of Franche-Comt\'{e},
-Besan\c con, France.\\
-$*:$ Authors in alphabetic order.\\
-}
\newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}
-\newcommand{\CG}[1]{\begin{color}
-{blue}\textit{}\end{color}}
+\newcommand{\CG}[1]{\begin{color}{blue}\textit{}\end{color}}
% make the title area
+
\maketitle
%IEEEtran, journal, \LaTeX, paper, template.
\section{Introduction}\label{sec:intro}
\input{intro.tex}
-
-\section{Similarity-based Approach}
-%input
+\section{Similarity-based approach}
% Main author : jfc
\input{classEquiv}
-
-
-\section{Annotated-based Approaches}
+\section{Annotation-based approaches}
% Main author : bassam
\input{annotated}
% \section{Second Stage: to Find Closed Genomes}
% \input{closedgenomes}
-
-
+\section{Discussion}
+\input{discussion.tex}
\section{Conclusion}\label{sec:concl}
-
+\input{conclusion}
\bibliographystyle{plain}