adding the directory of paper2

[chloroplast13.git] / main.tex

diff --git a/main.tex b/main.tex
index 6a6c3d549a943b9fd15b92ed6fb94efe6ed0d6ed..fd5f236d437af08541be86a10b7458d0feeffc2b 100755 (executable)
--- a/main.tex
+++ b/main.tex
@@ -1,4 +1,4 @@
-\documentclass[12pt]{article}
+\documentclass{article}

 \usepackage{subfig}
 \usepackage{color}
 \usepackage{graphicx}
 \usepackage{subfig}
 \usepackage{color}
 \usepackage{graphicx}


@@ -6,60 +6,62 @@
 \usepackage{cite}
 \usepackage{algorithm}
 \usepackage{algorithmic}
 \usepackage{cite}
 \usepackage{algorithm}
 \usepackage{algorithmic}

-\usepackage{longtable}

 \usepackage{pdflscape}
 \usepackage{pdflscape}

-
+\usepackage{authblk}
+\usepackage[T1]{fontenc}
+\usepackage{multirow,longtable}
+\usepackage{amsmath,mathtools}
+\usepackage{amssymb}
+\usepackage[standard]{ntheorem}
+\usepackage{stmaryrd}
+\usepackage[utf8]{inputenc}
+\usepackage{tikz}
+\usetikzlibrary{shapes,arrows}

 
 % correct bad hyphenation here
 \hyphenation{op-tical net-works semi-conduc-tor}
 
 
 % correct bad hyphenation here
 \hyphenation{op-tical net-works semi-conduc-tor}
 

- 
-\begin{document}

 
 

-\title{Finding the core-genes of Chloroplast Species}
+\title{Finding the Core-Genes of Plant Species Chloroplast}
+\author[1]{Bassam AlKindy} %\footnote{email: bassam.al-kindy@univ-fcomte.fr}
+\author[1]{Jean-Fran\c{c}ois Couchot} 
+\author[1]{Christophe Guyeux} 
+\author[2]{Arnaud Mouly}
+\author[1]{Michel Salomon}
+\author[1]{Jacques Bahi}
+\affil[1]{FEMTO-ST Institute, UMR 6174 CNRS, Computer Science Department DISC, Universit\'{e} de Franche-Comt\'{e}, France}
+\affil[2]{Lab. Chrono-Environnement, UMR 6249 CNRS, Universit\'{e} de Franche-Comt\'{e}, France}
+%{\small \it Authors in alphabetic order}

 
 

+\renewcommand\Authands{ and }
+\begin{document}

 
 

-\author{
-Bassam Al-Kindy,
-Jean-Fran\c{c}ois Couchot,  
-Christophe Guyeux,
-and Michel Salomon*\\
-FEMTO-ST Institute, UMR 6174 CNRS\\
-Computer Science Laboratory DISC,
-University of Franche-Comt\'{e},
-Besan\c con, France.\\
- $*:$ Authors in alphabetic order.\\
-}

 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}
 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}

-\newcommand{\CG}[1]{\begin{color}
-{blue}\textit{}\end{color}}
+\newcommand{\CG}[1]{\begin{color}{blue}\textit{}\end{color}}

 % make the title area
 % make the title area

+

 \maketitle
 
 %IEEEtran, journal, \LaTeX, paper, template.
 \input{abstract}
 
 \section{Introduction}\label{sec:intro}
 \maketitle
 
 %IEEEtran, journal, \LaTeX, paper, template.
 \input{abstract}
 
 \section{Introduction}\label{sec:intro}

-%\input{intro.tex}
-
+\input{intro.tex}

 
 

-\section{Similarity-based Approach}
-%input 
+\section{Similarity-based approach}

 % Main author : jfc
 \input{classEquiv}
 
 % Main author : jfc
 \input{classEquiv}
 

-
-
-\section{Annotated-based Approaches}
+\section{Annotation-based approaches}

 % Main author : bassam
 \input{annotated}
 
 % \section{Second Stage: to Find Closed Genomes}
 % \input{closedgenomes}
 % Main author : bassam
 \input{annotated}
 
 % \section{Second Stage: to Find Closed Genomes}
 % \input{closedgenomes}

-
-
+\section{Discussion}
+\input{discussion.tex}

 \section{Conclusion}\label{sec:concl}
 \section{Conclusion}\label{sec:concl}

-
+\input{conclusion}

 
 \bibliographystyle{plain}
 
 
 \bibliographystyle{plain}