X-Git-Url: https://bilbo.iut-bm.univ-fcomte.fr/and/gitweb/chloroplast13.git/blobdiff_plain/c3bc9b78abb7c8a25cd497b8d4b80f0ba8b8edb3..0a85c06533fceb861baab12dcc4ee954b4498201:/population_Table.tex?ds=inline

diff --git a/population_Table.tex b/population_Table.tex
index 6071e66..9915d1a 100644
--- a/population_Table.tex
+++ b/population_Table.tex
@@ -1,117 +1,170 @@
-\footnotesize 
-\setlength\LTleft{-30pt}            
-\setlength\LTright{-30pt}           
-\begin{longtable}{@{\extracolsep{\fill}}llllllllll@{}}
-\caption[NCBI Genomes Families]{List of family groups of Chloroplast Genomes from NCBI\label{Tab2}}\\
-% Heading
-	\hline\hline
-	{\textbf{Category}} & {\textbf{Counts}} & {\textbf{Accession No}} & {\textbf{Scientific Name}} \\ 
-	\hline
+\begin{center}  
+  
+  \begin{table}
+    \tiny
+    \begin{minipage}{0.50\textwidth}
+      \setlength{\tabcolsep}{4pt}
+      \begin{tabular}{|p{0.1cm}|p{0.1cm}|p{1.3cm}|p{3cm}|}
+      \hline
+      {{F.}}&{{\#}} & {{Acc. No}} & {{Scientific Name}} \\ 
+      \hline
 	%Entering First line
-	  & & NC\_001713.1 & Odontella sinensis \\ 
-	  & & NC\_008588.1 & Phaeodactylum tricornutum \\ 
-	  & & NC\_010772.1 & Heterosigma akashiwo \\ 
-	  & & NC\_011600.1 & Vaucheria litorea \\ 
-	  & & NC\_012903.1 & Aureoumbra lagunensis \\ 
-	  Brown Algae & 11 & NC\_014808.1 & Thalassiosira oceanica \\ 
-	  & & NC\_015403.1 & Fistulifera sp \\ 
-	  & & NC\_016731.1 & Synedra acus \\ 
-	  & & NC\_016735.1 & Fucus vesiculosus \\ 
-	  & & NC\_018523.1 & Saccharina japonica \\ 
-	  & & NC\_020014.1 & Nannochloropsis gadtina \\ [1ex]
-	%Entering second group
-	  & & NC\_000925.1 & Porphyra purpurea \\ 
-	  Red Algae & 3 & NC\_001840.1 & Cyanidium caldarium \\ 
-	  & & NC\_006137.1 & Gracilaria tenuistipitata \\ [1ex]
-	 %Entering third group
-	  & & NC\_000927.1 & Nephroselmis olivacea \\ 
-	  & & NC\_002186.1 & Mesotigma viride \\ 
-	  & & NC\_005353.1 & Chlamydomonas reinhardtii \\ 
-	  & & NC\_008097.1 & Chara vulgaris \\ 
-	  & & NC\_008099.1 & Oltmannsiellopsis viridis \\ 
-	  & & NC\_008114.1 & Pseudoclonium akinetum \\ 
-	  & & NC\_008289.1 & Ostreococcus tauri \\ 
-	  & & NC\_008372.1 & Stigeoclonium helveticum \\ 
-	  Green Algae & 17 & NC\_008822.1 & Chlorokybus atmophyticus \\ 
-	  & & NC\_011031.1 & Oedogonium cardiacum \\ 
-	  & & NC\_012097.1 & Pycnococcus provaseolii \\ 
-	  & & NC\_012099.1 & Pyramimonas parkeae \\ 
-	  & & NC\_012568.1 & Micromonas pusilla \\ 
-	  & & NC\_014346.1 & Floydiella terrestris \\ 
-	  & & NC\_015645.1 & Schizomeris leibleinii \\ 
-	  & & NC\_016732.1 & Dunaliella salina \\ 
-	  & & NC\_016733.1 & Pedinomonas minor \\ [1ex] 
-	 %Entering fourth group
-	  & & NC\_001319.1 & Marchantia polymorpha \\ 
-	  Brypoytes & 3 & NC\_004543.1 & Anthoceros formosae \\ 
-	  & & NC\_005087.1 & Physcomitrella patens \\ [1ex]
-	 %Entering fifth group
-	  & & NC\_014267.1 & Kryptoperidinium foliaceum \\ 
-	  Dinoflagellates & 2
-	  	& NC\_014287.1 & Durinskia baltica \\ [1ex]
-	 %Entering sixth group
-	  & & NC\_001603.2 & Euglena gracilis \\ 
-	  Euglena & 2 & NC\_020018.1 & Monomorphina aenigmatica \\ [1ex]
-	 %Entering seventh group
-	  & & NC\_003386.1 & Psilotum nudum \\ 
-	  & & NC\_008829.1 & Angiopteris evecta \\
-	  Fern & 5 & NC\_014348.1 & Pteridium aquilinum \\ 
-	  & & NC\_014699.1 & Equisetum arvense \\ 
-	  & & NC\_017006.1 & Mankyua chejuensis \\ [1ex]
-	  % Entering eighth group
-	  & & NC\_007898.3 & Solanum lyopersicum \\
-	  & & NC\_001568.1 & Epifagus virginiana \\ 
-	  & & NC\_001666.2 & Zea Mays \\ 
-	  & & NC\_005086.1 & Amborella trichopoda \\ 
-	  & & NC\_006050.1 & Nymphaea alba \\ 
-	  & & NC\_006290.1 & Panax ginseng \\ 
-	  & & NC\_007578.1 & Lactuca sativa \\ 
-	  & & NC\_007957.1 & vitis vinifera \\ 
-	  & & NC\_007977.1 & Helianthus annuus \\ 
-	  & & NC\_008325.1 & Daucus carota \\ 
-	  & & NC\_008336.1 & Nandina domestica \\ 
-	  & & NC\_008359.1 & Morus indica \\ 
-	  & & NC\_008407.1 & Jasminum nudiflorum \\ 
-	  & & NC\_008456.1 & Drimys granadensis \\ 
-	  & & NC\_008457.1 & Piper cenocladum \\ 
-	  & & NC\_009601.1 & Dioscorea elephantipes \\ 
-	  & & NC\_009765.1 & Cuscuta gronovii \\ 
-	  & & NC\_009808.1 & Ipomea purpurea \\ 
-	 Angiosperms & 45 & NC\_010361.1 & Oenothera biennis \\ 
-	  & & NC\_010433.1 & Manihot esculenta \\ 
-	  & & NC\_010442.1 & Trachelium caeruleum \\ 
-	  & & NC\_013707.2 & Olea europea \\ 
-	  & & NC\_013823.1 & Typha latifolia \\ 
-	  & & NC\_014570.1 & Eucalyptus \\ 
-	  & & NC\_014674.1 & Castanea mollissima \\ 
-	  & & NC\_014676.2 & Theobroma cacao \\ 
-	  & & NC\_015830.1 & Bambusa emeiensis \\ 
-	  & & NC\_015899.1 & Wolffia australiana \\ 
-	  & & NC\_016433.2 & Sesamum indicum \\ 
-	  & & NC\_016468.1 & Boea hygrometrica \\ 
-	  & & NC\_016670.1 & Gossypium darwinii \\ 
-	  & & NC\_016727.1 & Silene vulgaris \\ 
-	  & & NC\_016734.1 & Brassica napus \\ 
-	  & & NC\_016736.1 & Ricinus communis \\ 
-	  & & NC\_016753.1 & Colocasia esculenta \\ 
-	  & & NC\_017609.1 & Phalaenopsis equestris \\ 
-	  & & NC\_018357.1 & Magnolia denudata \\ 
-	  & & NC\_019601.1 & Fragaria chiloensis \\ 
-	  & & NC\_008796.1 & Ranunculus macranthus \\ 
-	  & & NC\_013991.2 & Phoenix dactylifera \\ 
-	  & & NC\_016068.1 & Nicotiana undulata \\ [1ex]
-	  %Entering ninth group
-	  & & NC\_009618.1 & Cycas taitungensis \\ 
-	  & & NC\_011942.1 & Gnetum parvifolium \\ 
-	  & & NC\_016058.1 & Larix decidua \\ 
-	  Gymnosperms & 7 & NC\_016063.1 & Cephalotaxus wilsoniana \\ 
-	  & & NC\_016065.1 & Taiwania cryptomerioides \\ 
-	  & & NC\_016069.1 & Picea morrisonicola \\ 
-	  & & NC\_016986.1 & Gingko biloba \\ [1ex]
-	  %Entering tenth group
-	  Haptophytes & 1 & NC\_007288.1 & Emiliana huxleyi\\ [1ex]
-	  %Entering eleventh group
-	  Lycopodiophyta & 2 & NC\_014675.1 & Isoetes flaccida \\
-	  & & NC\_006861.1 & Huperzia lucidula \\
-	\hline
-\end{longtable}
\ No newline at end of file
+      \parbox[t]{1mm}{\multirow{11}{*}{\rotatebox[origin=c]{90}{Brown Algae}}} &\multirow{11}{*}{11}  & NC\_001713.1 & Odontella sinensis \\ 
+      & & NC\_008588.1 & Phaeodactylum tricornutum \\ 
+      & & NC\_010772.1 & Heterosigma akashiwo \\ 
+      & & NC\_011600.1 & Vaucheria litorea \\ 
+      & & NC\_012903.1 & Aureoumbra lagunensis \\ 
+      &  & NC\_014808.1 & Thalassiosira oceanica \\ 
+      & & NC\_015403.1 & Fistulifera sp \\ 
+      & & NC\_016731.1 & Synedra acus \\ 
+      & & NC\_016735.1 & Fucus vesiculosus \\ 
+      & & NC\_018523.1 & Saccharina japonica \\ 
+      & & NC\_020014.1 & Nannochloropsis gadtina \\ 
+      \hline
+      % Entering second group
+      \parbox[t]{1mm}{\multirow{3}{*}{\rotatebox[origin=c]{90}{F1}}} &
+      \multirow{3}{*}{3} & NC\_000925.1 & Porphyra purpurea \\ 
+       &  & NC\_001840.1 & Cyanidium caldarium \\ 
+      & & NC\_006137.1 & Gracilaria tenuistipitata \\ 
+      \hline
+      % Entering third group
+      \parbox[t]{1mm}{\multirow{17}{*}{\rotatebox[origin=c]{90}{Green Algae}}} &
+      \multirow{17}{*}{17} & NC\_000927.1 & Nephroselmis olivacea \\ 
+      & & NC\_002186.1 & Mesotigma viride \\ 
+      & & NC\_005353.1 & Chlamydomonas reinhardtii \\ 
+      & & NC\_008097.1 & Chara vulgaris \\ 
+      & & NC\_008099.1 & Oltmannsiellopsis viridis \\ 
+      & & NC\_008114.1 & Pseudoclonium akinetum \\ 
+      & & NC\_008289.1 & Ostreococcus tauri \\ 
+      & & NC\_008372.1 & Stigeoclonium helveticum \\ 
+      & & NC\_008822.1 & Chlorokybus atmophyticus \\ 
+      & & NC\_011031.1 & Oedogonium cardiacum \\ 
+      & & NC\_012097.1 & Pycnococcus provaseolii \\ 
+      & & NC\_012099.1 & Pyramimonas parkeae \\ 
+      & & NC\_012568.1 & Micromonas pusilla \\ 
+      & & NC\_014346.1 & Floydiella terrestris \\ 
+      & & NC\_015645.1 & Schizomeris leibleinii \\ 
+      & & NC\_016732.1 & Dunaliella salina \\ 
+      & & NC\_016733.1 & Pedinomonas minor \\ % 
+      \hline
+      % Entering fourth group
+      \parbox[t]{1mm}{\multirow{3}{*}{\rotatebox[origin=c]{90}{F2}}} &
+      \multirow{3}{*}{3} & NC\_001319.1 & Marchantia polymorpha \\ 
+       &  & NC\_004543.1 & Anthoceros formosae \\ 
+      & & NC\_005087.1 & Physcomitrella patens \\ %
+      \hline
+      % Entering fifth group
+      \parbox[t]{1mm}{\multirow{2}{*}{\rotatebox[origin=c]{90}{F3}}} &
+      \multirow{2}{*}{2} & NC\_014267.1 & Kryptoperidinium foliaceum \\ 
+      & 
+      & NC\_014287.1 & Durinskia baltica \\ 
+      \hline
+
+      % Entering sixth group
+      \parbox[t]{1mm}{\multirow{2}{*}{\rotatebox[origin=c]{90}{F4}}}     &
+      \multirow{2}{*}{2} & NC\_001603.2 & Euglena gracilis \\ 
+      &  & NC\_020018.1 & Monomorphina aenigmatica \\ 
+       \hline
+       % Entering seventh group
+       \parbox[t]{1mm}{\multirow{5}{*}{\rotatebox[origin=c]{90}{Fern}}}     &       \multirow{5}{*}{5}
+       & NC\_003386.1 & Psilotum nudum \\ 
+      & & NC\_008829.1 & Angiopteris evecta \\
+      &  & NC\_014348.1 & Pteridium aquilinum \\ 
+      & & NC\_014699.1 & Equisetum arvense \\ 
+      & & NC\_017006.1 & Mankyua chejuensis \\ 
+      \hline
+    % Entering tenth group
+       & & & \\
+      \parbox[t]{1mm}{\multirow{1}{*}{\rotatebox[origin=c]{90}{F5}}}
+ & 1 & NC\_007288.1 & Emiliana huxleyi\\
+       & & & \\
+ \hline
+      % Entering eleventh group
+      \parbox[t]{1mm}{\multirow{2}{*}{\rotatebox[origin=c]{90}{F6}}}
+       & \multirow{2}{*}{2} & NC\_014675.1 & Isoetes flaccida \\
+      & & NC\_006861.1 & Huperzia lucidula \\
+      \hline
+ 
+
+    \end{tabular}
+  \end{minipage}    
+  \begin{minipage}{0.45\textwidth}
+   \begin{tabular}{|p{0.1cm}|p{0.1cm}|p{1.2cm}|p{2.7cm}|}
+      \hline
+      {{F.}}&{{\#}} & {{Acc. No}} & {{Scientific Name}} \\ 
+      \hline
+
+      % Entering eighth group
+      \parbox[t]{1mm}{\multirow{45}{*}{\rotatebox[origin=c]{90}{Angiosperms}}}  
+      & 
+      \multirow{45}{*}{45} & NC\_007898.3 & Solanum lyopersicum \\
+      & & NC\_001568.1 & Epifagus virginiana \\ 
+      & & NC\_001666.2 & Zea Mays \\ 
+      & & NC\_005086.1 & Amborella trichopoda \\ 
+      & & NC\_006050.1 & Nymphaea alba \\ 
+      & & NC\_006290.1 & Panax ginseng \\ 
+      & & NC\_007578.1 & Lactuca sativa \\ 
+      & & NC\_007957.1 & vitis vinifera \\ 
+      & & NC\_007977.1 & Helianthus annuus \\ 
+      & & NC\_008325.1 & Daucus carota \\ 
+      & & NC\_008336.1 & Nandina domestica \\ 
+      & & NC\_008359.1 & Morus indica \\ 
+      & & NC\_008407.1 & Jasminum nudiflorum \\ 
+      & & NC\_008456.1 & Drimys granadensis \\ 
+      & & NC\_008457.1 & Piper cenocladum \\ 
+      & & NC\_009601.1 & Dioscorea elephantipes \\ 
+      & & NC\_009765.1 & Cuscuta gronovii \\ 
+      & & NC\_009808.1 & Ipomea purpurea \\ 
+      & & NC\_010361.1 & Oenothera biennis \\ 
+      & & NC\_010433.1 & Manihot esculenta \\ 
+      & & NC\_010442.1 & Trachelium caeruleum \\ 
+      & & NC\_013707.2 & Olea europea \\ 
+      & & NC\_013823.1 & Typha latifolia \\ 
+      & & NC\_014570.1 & Eucalyptus \\ 
+      & & NC\_014674.1 & Castanea mollissima \\ 
+      & & NC\_014676.2 & Theobroma cacao \\ 
+      & & NC\_015830.1 & Bambusa emeiensis \\ 
+      & & NC\_015899.1 & Wolffia australiana \\ 
+      & & NC\_016433.2 & Sesamum indicum \\ 
+      & & NC\_016468.1 & Boea hygrometrica \\ 
+      & & NC\_016670.1 & Gossypium darwinii \\ 
+      & & NC\_016727.1 & Silene vulgaris \\ 
+      & & NC\_016734.1 & Brassica napus \\ 
+      & & NC\_016736.1 & Ricinus communis \\ 
+      & & NC\_016753.1 & Colocasia esculenta \\ 
+      & & NC\_017609.1 & Phalaenopsis equestris \\ 
+      & & NC\_018357.1 & Magnolia denudata \\ 
+      & & NC\_019601.1 & Fragaria chiloensis \\ 
+      & & NC\_008796.1 & Ranunculus macranthus \\ 
+      & & NC\_013991.2 & Phoenix dactylifera \\ 
+      & & NC\_016068.1 & Nicotiana undulata \\ 
+      \hline
+      % Entering ninth group
+      \parbox[t]{1mm}{\multirow{7}{*}{\rotatebox[origin=c]{90}{Gymnosperms}}}
+      & 
+      \multirow{7}{*}{7}& NC\_009618.1 & Cycas taitungensis \\ 
+      & & NC\_011942.1 & Gnetum parvifolium \\ 
+      & & NC\_016058.1 & Larix decidua \\ 
+      & & NC\_016063.1 & Cephalotaxus wilsoniana \\ 
+      & & NC\_016065.1 & Taiwania cryptomerioides \\ 
+      & & NC\_016069.1 & Picea morrisonicola \\ 
+      & & NC\_016986.1 & Gingko biloba \\ 
+      \hline
+     \end{tabular}
+  \end{minipage}
+ 
+  \scriptsize 
+  \noindent where families F1, F2, F3, F4, F5, and F6 are 
+  Red Algae,
+  Brypoytes, 
+  Dinoflagellates,
+  Euglena,
+  Haptophytes, and Lycopodiophyta respectively.
+
+  \normalsize
+  \caption[NCBI Genomes Families]{List of family groups of Chloroplast Genomes from NCBI\label{Tab2}}
+
+
+  \end{table}
+\end{center}  
+
