X-Git-Url: https://bilbo.iut-bm.univ-fcomte.fr/and/gitweb/mpi-energy2.git/blobdiff_plain/c0e417f74debcd978ae5229e414981fc3c45a19a..5c75116d9c7d80cb7029caf6307469d4b5abc9ed:/Heter_paper.tex

diff --git a/Heter_paper.tex b/Heter_paper.tex
index 0cc9720..2f78db5 100644
--- a/Heter_paper.tex
+++ b/Heter_paper.tex
@@ -568,32 +568,52 @@ maximum distance between the energy curve and the performance curve is, which re
 
 \section{Experimental results}
 \label{sec.expe}
+While in~\cite{mpi-energy2} the energy  model and the scaling factors selection algorithm were applied to a heterogeneous cluster and  evaluated over the SimGrid simulator~\cite{SimGrid.org}, 
+in this paper real experiments were conducted over the grid'5000 platform. 
 
 \subsection{Grid'5000 architature and power consumption}
 \label{sec.grid5000}
-The grid'5000 is a large-scale testbed found in France \cite{grid5000}.
-The grid infrastructure consist of ten sites distributed over all France 
-metropolitan regions. Each site in the grid'5000 composed from number of heterogeneous 
-computing clusters, while each cluster includes a collection of homogeneous nodes.
-In general, the grid'5000 had one thousand of heterogeneous nodes and eight thousand of cores. 
-All the sites are connected together via special long distance network called RENATER,
-which is the French National Telecommunication Network for Technology. Whereas inside each site 
-the clusters and their nodes are connected throw high speed local area networks. 
-There are different types of local networks used such as Ethernet and Infiniband netwoks,  
-which allowed different gigabits bandwidth and latencies.  On the other hand, the nodes inside each cluster 
-are homogeneous, while they are different from the nodes of the other clusters. Therefore, there are
-a wide diversity of processors in grid'5000, that mainly had different processors families 
-such as  Intel Xeon and AMD Opteron families. 
-
-In this paper we are interested  to run NAS parallel v3.3 \cite{NAS.Parallel.Benchmarks} over grid'5000.
-We are used seven benchmarks, CG, MG, EP, LU, BT, SP and FT. These benchmarks used seven different types of classes.
-These classes are S, W, A, B, C, D, E, where S represents the smaller problem size that used by benchmark and
-E is represents the biggest class. In this work, the class D is used for all benchmarks in all the experiments that will 
-be showed in the coming sections.
-Moreover, the NAS parallel benchmarks have different computations and communications ratios, then it is interested 
-to study their energy consumption and their performance on real testbed such as grid'5000.
-In this work, the NAS benchmarks are executed over two sites, Lyon and Nancy sites, of grid'5000.
-These two sites had seven different types of computing clusters as in figure (\ref{fig:grid5000}).
+Grid'5000~\cite{grid5000} is a large-scale testbed that consists of ten sites distributed over all metropolitan France and Luxembourg. All the sites are connected together via 	a special long distance network called RENATER,
+which is the French National Telecommunication Network for Technology.
+Each site of the grid is composed of few heterogeneous 
+computing clusters and each cluster contains many homogeneous nodes. In total,
+ grid'5000 has about  one thousand heterogeneous nodes and eight thousand cores.  In each site,
+the clusters and their nodes are connected via  high speed local area networks. 
+Two types of local networks are used, Ethernet or Infiniband networks which have  different characteristics in terms of bandwidth and latency.  
+
+Since grid'5000 is dedicated for testing, contrary to production grids it allows a user to deploy its own customized operating system on all the booked nodes. The user could have root rights and thus apply DVFS operations while executing a distributed application. Moreover, the grid'5000 testbed provides at some sites a power measurement tool to capture 
+the power consumption  for each node in those sites. The measured power is the overall consumed power by by all the components of a node at a given instant, such as CPU, hard drive, main-board, memory, ...  For more details refer to
+\cite{Energy_measurement}. To just measure the CPU power of one core in a node $j$, 
+ firstly,  the power consumed by the node while being idle at instant $y$, noted as $\Pidle[jy]$, was measured. Then, the power was measured while running a single thread benchmark with no communication (no idle time) over the same node with its CPU scaled to the maximum available frequency. The latter power measured at time $x$ with maximum frequency for one core of node $j$ is noted $P\max[jx]$. The difference between the two measured power consumption represents the 
+dynamic power consumption of that core with the maximum frequency, see  figure(\ref{fig:power_cons}). 
+
+\textcolor{red}{why maximum and minimum, change peak in the equation and the figure}
+
+The dynamic power $\Pd[j]$ is computed as in equation (\ref{eq:pdyn})
+\begin{equation}
+  \label{eq:pdyn}
+    \Pd[j] = \max_{x=\beta_1,\dots \beta_2} (P\max[jx])  -  \min_{y=\Theta_1,\dots \Theta_2} (\Pidle[jy])
+\end{equation}
+
+where $\Pd[j]$ is the dynamic power consumption for one core of node $j$, 
+$\lbrace \beta_1,\beta_2 \rbrace$ is the time interval for the measured peak power values, 
+$\lbrace\Theta_1,\Theta_2\rbrace$ is the time interval for the measured  idle power values.
+Therefore, the dynamic power of one core is computed as the difference between the maximum 
+measured value in peak powers vector and the minimum measured value in the idle powers vector.
+
+On the other hand, the static power consumption by one core is a part of the measured idle power consumption of the node. Since in grid'5000 there is no way to measure precisely the consumed static power and in~\cite{Our_first_paper,pdsec2015,Rauber_Analytical.Modeling.for.Energy} it was assumed that  the static power  represents a ratio of the dynamic power, the value of the static power is assumed as  np[\%]{20} of dynamic power consumption of the core.
+
+In the experiments presented in the following sections, two sites of grid'5000 were used, Lyon and Nancy sites. These two sites have in total seven different clusters as in figure (\ref{fig:grid5000}).
+
+Four clusters from the two sites were selected in the experiments: one cluster from 
+Lyon's site, Taurus cluster, and three clusters from Nancy's site, Graphene, 
+Griffon and Graphite. Each one of these clusters has homogeneous nodes inside, while nodes from different clusters are heterogeneous in many aspects such as: computing power, power consumption, available 
+frequency ranges and local network features: the bandwidth and the latency.  Table \ref{table:grid5000} shows 
+the details characteristics of these four clusters. Moreover, the dynamic powers were computed  using the equation (\ref{eq:pdyn}) for all the nodes in the 
+selected clusters and are presented in table  \ref{table:grid5000}.
+
+
+
 
 \begin{figure}[!t]
   \centering
@@ -602,12 +622,22 @@ These two sites had seven different types of computing clusters as in figure (\r
   \label{fig:grid5000}
 \end{figure}
 
-Four clusters from the two sites are selected in the experiments, one cluster from 
-Lyon site, Taurus cluster, and three clusters from Nancy site where are Graphene, 
-Griffon and Graphite. Each one of these clusters has homogeneous nodes inside, while their nodes are
-different from the nodes of other clusters in many aspects such as: computing power, power consumption, available 
-frequencies ranges and the network features, the bandwidth and the latency. The Table \ref{table:grid5000} shows 
-the details characteristics of these four clusters.
+
+The energy model and the scaling factors selection algorithm were applied to the NAS parallel benchmarks v3.3 \cite{NAS.Parallel.Benchmarks} and evaluated over grid'5000.
+The benchmark suite contains seven applications: CG, MG, EP, LU, BT, SP and FT. These applications have different computations and communications ratios and strategies which make them good testbed applications to evaluate the proposed algorithm and energy model.
+The benchmarks have seven different classes, S, W, A, B, C, D and E, that represent the size of the problem that the method solves. In this work, the class D was used for all benchmarks in all the experiments presented in the next sections. 
+
+
+
+
+\begin{figure}[!t]
+  \centering
+  \includegraphics[scale=0.6]{fig/power_consumption.pdf}
+  \caption{The power consumption by one core from Taurus cluster}
+  \label{fig:power_cons}
+\end{figure}
+
+
 
   
 \begin{table}[!t]
@@ -640,44 +670,7 @@ the details characteristics of these four clusters.
   \label{table:grid5000}
 \end{table} 
 
-The grid'5000 testbed provided some monitoring and measurements features to captured 
-the power consumption values for each node in any cluster of Lyon and Nancy sites. 
-The power consumed for each node from the selected four clusters is measured. 
-While the power consumed by any computing node is a collection of the powers  consumed by 
-hard drive, main-board, memory and node's computing cores, for more detail refer to
-\cite{Energy_measurement}. Therefore, the dynamic power consumed
-by one core is not allowed to measured alone. To overcome this problem, firstly, 
-we measured the power consumed by one node when there is no computation, when 
-the CPU is in the idle state. The second step, we run EP benchmark, there is no communications 
-in this benchmarks, over one core with maximum frequency of the desired node and 
-capturing the power consumed by a node, this representing the peak power of the node with one core.  
-The difference between the peak power  and the idle power representing the 
-dynamic power consumption of that core with maximum frequency, for example see figure(\ref{fig:power_cons}). 
-The $\Ppeak[jx]$ is the peak power value in time $x$ with maximum frequency for one core of node $j$, 
-and $\Pidle[jy]$ is the idle power value in time $y$ for the one  core of the node $j$ . 
-The dynamic power $\Pd[j]$ is computed as in equation (\ref{eq:pdyn})
-\begin{equation}
-  \label{eq:pdyn}
-    \Pd[j] = \max_{x=\beta_1,\dots \beta_2} (\Ppeak[jx])  -  \min_{y=\Theta_1,\dots \Theta_2} (\Pidle[jy])
-\end{equation}
 
-where $\Pd[j]$ is the dynamic power consumption for one core of node $j$, 
-$\lbrace \beta_1,\beta_2 \rbrace$ is the time interval for the measured peak power values, 
-$\lbrace\Theta_1,\Theta_2\rbrace$ is the time interval for the measured  idle power values.
-Therefore, the dynamic power of one core is computed as the difference between the maximum 
-measured value in peak powers vector and the minimum measured value in the idle powers vector.
-We are computed the dynamic powers, using the equation (\ref{eq:pdyn}), for all nodes in the 
-selected clusters, which is recorded in table  \ref{table:grid5000}.
-On the other side, the static power consumption by one core is embedded with whole idle power consumption of the node.
-Indeed, the static power is represents as ratio from  dynamic power. So, we supposed  
-the static power consumption represented  as \np[\%]{20} of dynamic power consumption of the core, 
-the same assumption was made in \cite{Our_first_paper,pdsec2015,Rauber_Analytical.Modeling.for.Energy}.
-\begin{figure}[!t]
-  \centering
-  \includegraphics[scale=0.6]{fig/power_consumption.pdf}
-  \caption{The power consumption by one core from Taurus cluster}
-  \label{fig:power_cons}
-\end{figure}
 
 
 \subsection{The experimental results of the scaling algorithm}