X-Git-Url: https://bilbo.iut-bm.univ-fcomte.fr/and/gitweb/rce2015.git/blobdiff_plain/508eb0199cb2b5f94ce4ce4878b8b8a3bea05431..f2509eae84a623fa2e4d8ce48287c665efb02f9d:/paper.tex diff --git a/paper.tex b/paper.tex index e69de29..f800225 100644 --- a/paper.tex +++ b/paper.tex @@ -0,0 +1,675 @@ +\documentclass[times]{cpeauth} + +\usepackage{moreverb} + +%\usepackage[dvips,colorlinks,bookmarksopen,bookmarksnumbered,citecolor=red,urlcolor=red]{hyperref} + +%\newcommand\BibTeX{{\rmfamily B\kern-.05em \textsc{i\kern-.025em b}\kern-.08em +%T\kern-.1667em\lower.7ex\hbox{E}\kern-.125emX}} + +\def\volumeyear{2015} + +\usepackage{graphicx} +\usepackage{wrapfig} +\usepackage{grffile} + +\usepackage[T1]{fontenc} +\usepackage[utf8]{inputenc} +\usepackage{amsfonts,amssymb} +\usepackage{amsmath} +\usepackage{algorithm} +\usepackage{algpseudocode} +%\usepackage{amsthm} +\usepackage{graphicx} +\usepackage[american]{babel} +% Extension pour les liens intra-documents (tagged PDF) +% et l'affichage correct des URL (commande \url{http://example.com}) +%\usepackage{hyperref} + +\usepackage{url} +\DeclareUrlCommand\email{\urlstyle{same}} + +\usepackage[autolanguage,np]{numprint} +\AtBeginDocument{% + \renewcommand*\npunitcommand[1]{\text{#1}} + \npthousandthpartsep{}} + +\usepackage{xspace} +\usepackage[textsize=footnotesize]{todonotes} + +\newcommand{\AG}[2][inline]{% + \todo[color=green!50,#1]{\sffamily\textbf{AG:} #2}\xspace} +\newcommand{\RC}[2][inline]{% + \todo[color=red!10,#1]{\sffamily\textbf{RC:} #2}\xspace} +\newcommand{\LZK}[2][inline]{% + \todo[color=blue!10,#1]{\sffamily\textbf{LZK:} #2}\xspace} +\newcommand{\RCE}[2][inline]{% + \todo[color=yellow!10,#1]{\sffamily\textbf{RCE:} #2}\xspace} + +\algnewcommand\algorithmicinput{\textbf{Input:}} +\algnewcommand\Input{\item[\algorithmicinput]} + +\algnewcommand\algorithmicoutput{\textbf{Output:}} +\algnewcommand\Output{\item[\algorithmicoutput]} + +\newcommand{\TOLG}{\mathit{tol_{gmres}}} +\newcommand{\MIG}{\mathit{maxit_{gmres}}} +\newcommand{\TOLM}{\mathit{tol_{multi}}} +\newcommand{\MIM}{\mathit{maxit_{multi}}} +\newcommand{\TOLC}{\mathit{tol_{cgls}}} +\newcommand{\MIC}{\mathit{maxit_{cgls}}} + +\usepackage{array} +\usepackage{color, colortbl} +\newcolumntype{M}[1]{>{\centering\arraybackslash}m{#1}} +\newcolumntype{Z}[1]{>{\raggedleft}m{#1}} + +\newcolumntype{g}{>{\columncolor{Gray}}c} +\definecolor{Gray}{gray}{0.9} + + + +\begin{document} +\RCE{Titre a confirmer.} +\title{Comparative performance analysis of simulated grid-enabled numerical iterative algorithms} +%\itshape{\journalnamelc}\footnotemark[2]} + +\author{ Charles Emile Ramamonjisoa and + David Laiymani and + Arnaud Giersch and + Lilia Ziane Khodja and + Raphaël Couturier +} + +\address{ + \centering + Femto-ST Institute - DISC Department\\ + Université de Franche-Comté\\ + Belfort\\ + Email: \email{{raphael.couturier,arnaud.giersch,david.laiymani,charles.ramamonjisoa}@univ-fcomte.fr} +} + +%% Lilia Ziane Khodja: Department of Aerospace \& Mechanical Engineering\\ Non Linear Computational Mechanics\\ University of Liege\\ Liege, Belgium. Email: l.zianekhodja@ulg.ac.be + +\begin{abstract} + The behavior of multicore applications is always a challenge to predict, especially with a new architecture for which no experiment has been performed. With some applications, it is difficult, if not impossible, to build accurate performance models. That is why another solution is to use a simulation tools that allows us to change many parameters of the architecture (network bandwidth, latency, number of processors) and to simulate the execution of such applications. + + In this paper, we focus our attention on two parallel iterative algorithms: one with synchronoous iterations and another one with asynchronous iterations. + + +\end{abstract} + +\keywords{Algorithm; distributed; iterative; asynchronous; simulation; simgrid; performance} + +\maketitle + +\section{Introduction} + +\section{The asynchronous iteration model} + +\section{SimGrid} + +%%%%%%%%%%%%%%%%%%%%%%%%% +%%%%%%%%%%%%%%%%%%%%%%%%% + +\section{Two-stage multisplitting methods} +\label{sec:04} +\subsection{Synchronous and asynchronous two-stage methods for sparse linear systems} +\label{sec:04.01} +In this paper we focus on two-stage multisplitting methods in their both versions synchronous and asynchronous~\cite{Frommer92,Szyld92,Bru95}. These iterative methods are based on multisplitting methods~\cite{O'leary85,White86,Alefeld97} and use two nested iterations: the outer iteration and the inner iteration. Let us consider the following sparse linear system of $n$ equations in $\mathbb{R}$ +\begin{equation} +Ax=b, +\label{eq:01} +\end{equation} +where $A$ is a sparse square and nonsingular matrix, $b$ is the right-hand side and $x$ is the solution of the system. Our work in this paper is restricted to the block Jacobi splitting method. This approach of multisplitting consists in partitioning the matrix $A$ into $L$ horizontal band matrices of order $\frac{n}{L}\times n$ without overlapping (i.e. sub-vectors $\{x_\ell\}_{1\leq\ell\leq L}$ are disjoint). The two-stage multisplitting methods solve the linear system~(\ref{eq:01}) iteratively as follows +\begin{equation} +x_\ell^{k+1} = A_{\ell\ell}^{-1}(b_\ell - \displaystyle\sum^{L}_{\substack{m=1\\m\neq\ell}}{A_{\ell m}x^k_m}),\mbox{~for~}\ell=1,\ldots,L\mbox{~and~}k=1,2,3,\ldots +\label{eq:02} +\end{equation} +where $x_\ell$ are sub-vectors of the solution $x$, $b_\ell$ are the sub-vectors of the right-hand side $b$, and $A_{\ell\ell}$ and $A_{\ell m}$ are diagonal and off-diagonal blocks of matrix $A$ respectively. The iterations of these methods can naturally be computed in parallel such that each processor or cluster of processors is responsible for solving one splitting as a linear sub-system +\begin{equation} +A_{\ell\ell} x_\ell = c_\ell,\mbox{~for~}\ell=1,\ldots,L, +\label{eq:03} +\end{equation} +where right-hand sides $c_\ell=b_\ell-\sum_{m\neq\ell}A_{\ell m}x_m$ are computed using the shared vectors $x_m$. In this paper, we use the well-known iterative method GMRES ({\it Generalized Minimal RESidual})~\cite{saad86} as an inner iteration to approximate the solutions of the different splittings arising from the block Jacobi multisplitting of matrix $A$. The algorithm in Figure~\ref{alg:01} shows the main key points of our block Jacobi two-stage method executed by a cluster of processors. In line~\ref{solve}, the linear sub-system~(\ref{eq:03}) is solved in parallel using GMRES method where $\MIG$ and $\TOLG$ are the maximum number of inner iterations and the tolerance threshold for GMRES respectively. The convergence of the two-stage multisplitting methods, based on synchronous or asynchronous iterations, is studied by many authors for example~\cite{Bru95,bahi07}. + +\begin{figure}[t] +%\begin{algorithm}[t] +%\caption{Block Jacobi two-stage multisplitting method} +\begin{algorithmic}[1] + \Input $A_\ell$ (sparse matrix), $b_\ell$ (right-hand side) + \Output $x_\ell$ (solution vector)\vspace{0.2cm} + \State Set the initial guess $x^0$ + \For {$k=1,2,3,\ldots$ until convergence} + \State $c_\ell=b_\ell-\sum_{m\neq\ell}A_{\ell m}x_m^{k-1}$ + \State $x^k_\ell=Solve_{gmres}(A_{\ell\ell},c_\ell,x^{k-1}_\ell,\MIG,\TOLG)$\label{solve} + \State Send $x_\ell^k$ to neighboring clusters\label{send} + \State Receive $\{x_m^k\}_{m\neq\ell}$ from neighboring clusters\label{recv} + \EndFor +\end{algorithmic} +\caption{Block Jacobi two-stage multisplitting method} +\label{alg:01} +%\end{algorithm} +\end{figure} + +In this paper, we propose two algorithms of two-stage multisplitting methods. The first algorithm is based on asynchronous model which allows the communications to be overlapped by computations and reduces the idle times resulting from the synchronizations. So in the asynchronous mode, our two-stage algorithm uses asynchronous outer iterations and asynchronous communications between clusters. The communications (i.e. lines~\ref{send} and~\ref{recv} in Figure~\ref{alg:01}) are performed by message passing using MPI non-blocking communication routines. The convergence of the asynchronous iterations is detected when all clusters have locally converged +\begin{equation} +k\geq\MIM\mbox{~or~}\|x_\ell^{k+1}-x_\ell^k\|_{\infty }\leq\TOLM, +\label{eq:04} +\end{equation} +where $\MIM$ is the maximum number of outer iterations and $\TOLM$ is the tolerance threshold for the two-stage algorithm. + +The second two-stage algorithm is based on synchronous outer iterations. We propose to use the Krylov iteration based on residual minimization to improve the slow convergence of the multisplitting methods. In this case, a $n\times s$ matrix $S$ is set using solutions issued from the inner iteration +\begin{equation} +S=[x^1,x^2,\ldots,x^s],~s\ll n. +\label{eq:05} +\end{equation} +At each $s$ outer iterations, the algorithm computes a new approximation $\tilde{x}=S\alpha$ which minimizes the residual +\begin{equation} +\min_{\alpha\in\mathbb{R}^s}{\|b-AS\alpha\|_2}. +\label{eq:06} +\end{equation} +The algorithm in Figure~\ref{alg:02} includes the procedure of the residual minimization and the outer iteration is restarted with a new approximation $\tilde{x}$ at every $s$ iterations. The least-squares problem~(\ref{eq:06}) is solved in parallel by all clusters using CGLS method~\cite{Hestenes52} such that $\MIC$ is the maximum number of iterations and $\TOLC$ is the tolerance threshold for this method (line~\ref{cgls} in Figure~\ref{alg:02}). + +\begin{figure}[t] +%\begin{algorithm}[t] +%\caption{Krylov two-stage method using block Jacobi multisplitting} +\begin{algorithmic}[1] + \Input $A_\ell$ (sparse matrix), $b_\ell$ (right-hand side) + \Output $x_\ell$ (solution vector)\vspace{0.2cm} + \State Set the initial guess $x^0$ + \For {$k=1,2,3,\ldots$ until convergence} + \State $c_\ell=b_\ell-\sum_{m\neq\ell}A_{\ell m}x_m^{k-1}$ + \State $x^k_\ell=Solve_{gmres}(A_{\ell\ell},c_\ell,x^{k-1}_\ell,\MIG,\TOLG)$ + \State $S_{\ell,k\mod s}=x_\ell^k$ + \If{$k\mod s = 0$} + \State $\alpha = Solve_{cgls}(AS,b,\MIC,\TOLC)$\label{cgls} + \State $\tilde{x_\ell}=S_\ell\alpha$ + \State Send $\tilde{x_\ell}$ to neighboring clusters + \Else + \State Send $x_\ell^k$ to neighboring clusters + \EndIf + \State Receive $\{x_m^k\}_{m\neq\ell}$ from neighboring clusters + \EndFor +\end{algorithmic} +\caption{Krylov two-stage method using block Jacobi multisplitting} +\label{alg:02} +%\end{algorithm} +\end{figure} + +\subsection{Simulation of two-stage methods using SimGrid framework} +\label{sec:04.02} + +One of our objectives when simulating the application in SIMGRID is, as in real life, to get accurate results (solutions of the problem) but also ensure the test reproducibility under the same conditions.According our experience, very few modifications are required to adapt a MPI program to run in SIMGRID simulator using SMPI (Simulator MPI).The first modification is to include SMPI libraries and related header files (smpi.h). The second and important modification is to eliminate all global variables in moving them to local subroutine or using a Simgrid selector called "runtime automatic switching" (smpi/privatize\_global\_variables). Indeed, global variables can generate side effects on runtime between the threads running in the same process, generated by the Simgrid to simulate the grid environment.The last modification on the MPI program pointed out for some cases, the review of the sequence of the MPI\_Isend, MPI\_Irecv and MPI\_Waitall instructions which might cause an infinite loop. + + +\paragraph{SIMGRID Simulator parameters} + +\begin{itemize} + \item HOSTFILE: Hosts description file. + \item PLATFORM: File describing the platform architecture : clusters (CPU power, +\dots{}), intra cluster network description, inter cluster network (bandwidth bw, +lat latency, \dots{}). + \item ARCHI : Grid computational description (Number of clusters, Number of +nodes/processors for each cluster). +\end{itemize} + + +In addition, the following arguments are given to the programs at runtime: + +\begin{itemize} + \item Maximum number of inner and outer iterations; + \item Inner and outer precisions; + \item Matrix size (NX, NY and NZ); + \item Matrix diagonal value = 6.0; + \item Execution Mode: synchronous or asynchronous. +\end{itemize} + +At last, note that the two solver algorithms have been executed with the Simgrid selector --cfg=smpi/running\_power which determine the computational power (here 19GFlops) of the simulator host machine. + +%%%%%%%%%%%%%%%%%%%%%%%%% +%%%%%%%%%%%%%%%%%%%%%%%%% + +\section{Experimental, Results and Comments} + + +\subsection{Setup study and Methodology} + +To conduct our study, we have put in place the following methodology +which can be reused with any grid-enabled applications. + +\textbf{Step 1} : Choose with the end users the class of algorithms or +the application to be tested. Numerical parallel iterative algorithms +have been chosen for the study in the paper. + +\textbf{Step 2} : Collect the software materials needed for the +experimentation. In our case, we have three variants algorithms for the +resolution of three 3D-Poisson problem: (1) using the classical GMRES alias Algo-1 in this +paper, (2) using the multisplitting method alias Algo-2 and (3) an +enhanced version of the multisplitting method as Algo-3. In addition, +SIMGRID simulator has been chosen to simulate the behaviors of the +distributed applications. SIMGRID is running on the Mesocentre +datacenter in Franche-Comte University but also in a virtual +machine on a laptop. + +\textbf{Step 3} : Fix the criteria which will be used for the future +results comparison and analysis. In the scope of this study, we retain +in one hand the algorithm execution mode (synchronous and asynchronous) +and in the other hand the execution time and the number of iterations of +the application before obtaining the convergence. + +\textbf{Step 4 }: Setup up the different grid testbeds environment +which will be simulated in the simulator tool to run the program. The +following architecture has been configured in Simgrid : 2x16 - that is a +grid containing 2 clusters with 16 hosts (processors/cores) each -, 4x8, +4x16, 8x8 and 2x50. The network has been designed to operate with a +bandwidth equals to 10Gbits (resp. 1Gbits/s) and a latency of 8E-6 +microseconds (resp. 5E-5) for the intra-clusters links (resp. +inter-clusters backbone links). + +\textbf{Step 5}: Process an extensive and comprehensive testings +within these configurations in varying the key parameters, especially +the CPU power capacity, the network parameters and also the size of the +input matrix. Note that some parameters should be invariant to allow the +comparison like some program input arguments. + +{Step 6} : Collect and analyze the output results. + +\subsection{Factors impacting distributed applications performance in +a grid environment} + +From our previous experience on running distributed application in a +computational grid, many factors are identified to have an impact on the +program behavior and performance on this specific environment. Mainly, +first of all, the architecture of the grid itself can obviously +influence the performance results of the program. The performance gain +might be important theoretically when the number of clusters and/or the +number of nodes (processors/cores) in each individual cluster increase. + +Another important factor impacting the overall performance of the +application is the network configuration. Two main network parameters +can modify drastically the program output results : (i) the network +bandwidth (bw=bits/s) also known as "the data-carrying capacity" +of the network is defined as the maximum of data that can pass +from one point to another in a unit of time. (ii) the network latency +(lat : microsecond) defined as the delay from the start time to send the +data from a source and the final time the destination have finished to +receive it. Upon the network characteristics, another impacting factor +is the application dependent volume of data exchanged between the nodes +in the cluster and between distant clusters. Large volume of data can be +transferred in transit between the clusters and nodes during the code +execution. + + In a grid environment, it is common to distinguish in one hand, the +"\,intra-network" which refers to the links between nodes within a +cluster and in the other hand, the "\,inter-network" which is the +backbone link between clusters. By design, these two networks perform +with different speed. The intra-network generally works like a high +speed local network with a high bandwith and very low latency. In +opposite, the inter-network connects clusters sometime via heterogeneous +networks components thru internet with a lower speed. The network +between distant clusters might be a bottleneck for the global +performance of the application. + +\subsection{Comparing GMRES and Multisplitting algorithms in +synchronous mode} + +In the scope of this paper, our first objective is to demonstrate the +Algo-2 (Multisplitting method) shows a better performance in grid +architecture compared with Algo-1 (Classical GMRES) both running in +\textbf{\textit{synchronous mode}}. Better algorithm performance +should mean a less number of iterations output and a less execution time +before reaching the convergence. For a systematic study, the experiments +should figure out that, for various grid parameters values, the +simulator will confirm the targeted outcomes, particularly for poor and +slow networks, focusing on the impact on the communication performance +on the chosen class of algorithm. + +The following paragraphs present the test conditions, the output results +and our comments. + + +\textit{3.a Executing the algorithms on various computational grid +architecture scaling up the input matrix size} +\\ + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x16, 4x8, 4x16 and 8x8\\ %\hline + Network & N2 : bw=1Gbs-lat=5E-05 \\ %\hline + Input matrix size & N$_{x}$ =150 x 150 x 150 and\\ %\hline + - & N$_{x}$ =170 x 170 x 170 \\ \hline + \end{tabular} +Table 1 : Clusters x Nodes with NX=150 or NX=170 \\ + +\end{footnotesize} + + + +%\RCE{J'ai voulu mettre les tableaux des données mais je pense que c'est inutile et ça va surcharger} + + +The results in figure 1 show the non-variation of the number of +iterations of classical GMRES for a given input matrix size; it is not +the case for the multisplitting method. + +%\begin{wrapfigure}{l}{100mm} +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{cluster_x_nodes_nx_150_and_nx_170.pdf} +\caption{Cluster x Nodes NX=150 and NX=170} +%\label{overflow}} +\end{figure} +%\end{wrapfigure} + +Unless the 8x8 cluster, the time +execution difference between the two algorithms is important when +comparing between different grid architectures, even with the same number of +processors (like 2x16 and 4x8 = 32 processors for example). The +experiment concludes the low sensitivity of the multisplitting method +(compared with the classical GMRES) when scaling up to higher input +matrix size. + +\textit{\\3.b Running on various computational grid architecture\\} + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x16, 4x8\\ %\hline + Network & N1 : bw=10Gbs-lat=8E-06 \\ %\hline + - & N2 : bw=1Gbs-lat=5E-05 \\ + Input matrix size & N$_{x}$ =150 x 150 x 150\\ \hline \\ + \end{tabular} +Table 2 : Clusters x Nodes - Networks N1 x N2 \\ + + \end{footnotesize} + + + +%\begin{wrapfigure}{l}{100mm} +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{cluster_x_nodes_n1_x_n2.pdf} +\caption{Cluster x Nodes N1 x N2} +%\label{overflow}} +\end{figure} +%\end{wrapfigure} + +The experiments compare the behavior of the algorithms running first on +speed inter- cluster network (N1) and a less performant network (N2). +The figure 2 shows that end users will gain to reduce the execution time +for both algorithms in using a grid architecture like 4x16 or 8x8: the +performance was increased in a factor of 2. The results depict also that +when the network speed drops down, the difference between the execution +times can reach more than 25\%. + +\textit{\\3.c Network latency impacts on performance\\} + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x16\\ %\hline + Network & N1 : bw=1Gbs \\ %\hline + Input matrix size & N$_{x}$ =150 x 150 x 150\\ \hline\\ + \end{tabular} + +Table 3 : Network latency impact \\ + +\end{footnotesize} + + + +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{network_latency_impact_on_execution_time.pdf} +\caption{Network latency impact on execution time} +%\label{overflow}} +\end{figure} + + +According the results in table and figure 3, degradation of the network +latency from 8.10$^{-6}$ to 6.10$^{-5}$ implies an absolute time +increase more than 75\% (resp. 82\%) of the execution for the classical +GMRES (resp. multisplitting) algorithm. In addition, it appears that the +multisplitting method tolerates more the network latency variation with +a less rate increase. Consequently, in the worst case (lat=6.10$^{-5 +}$), the execution time for GMRES is almost the double of the time for +the multisplitting, even though, the performance was on the same order +of magnitude with a latency of 8.10$^{-6}$. + +\textit{\\3.d Network bandwidth impacts on performance\\} + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x16\\ %\hline + Network & N1 : bw=1Gbs - lat=5E-05 \\ %\hline + Input matrix size & N$_{x}$ =150 x 150 x 150\\ \hline + \end{tabular} + +Table 4 : Network bandwidth impact \\ + +\end{footnotesize} + + +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{network_bandwith_impact_on_execution_time.pdf} +\caption{Network bandwith impact on execution time} +%\label{overflow} +\end{figure} + + + +The results of increasing the network bandwidth depict the improvement +of the performance by reducing the execution time for both of the two +algorithms. However, and again in this case, the multisplitting method +presents a better performance in the considered bandwidth interval with +a gain of 40\% which is only around 24\% for classical GMRES. + +\textit{\\3.e Input matrix size impacts on performance\\} + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 4x8\\ %\hline + Network & N2 : bw=1Gbs - lat=5E-05 \\ %\hline + Input matrix size & N$_{x}$ = From 40 to 200\\ \hline + \end{tabular} +Table 5 : Input matrix size impact\\ + +\end{footnotesize} + + +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{pb_size_impact_on_execution_time.pdf} +\caption{Pb size impact on execution time} +%\label{overflow}} +\end{figure} + +In this experimentation, the input matrix size has been set from +Nx=Ny=Nz=40 to 200 side elements that is from 40$^{3}$ = 64.000 to +200$^{3}$ = 8.000.000 points. Obviously, as shown in the figure 5, +the execution time for the algorithms convergence increases with the +input matrix size. But the interesting result here direct on (i) the +drastic increase (300 times) of the number of iterations needed before +the convergence for the classical GMRES algorithm when the matrix size +go beyond Nx=150; (ii) the classical GMRES execution time also almost +the double from Nx=140 compared with the convergence time of the +multisplitting method. These findings may help a lot end users to setup +the best and the optimal targeted environment for the application +deployment when focusing on the problem size scale up. Note that the +same test has been done with the grid 2x16 getting the same conclusion. + +\textit{\\3.f CPU Power impact on performance\\} + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x16\\ %\hline + Network & N2 : bw=1Gbs - lat=5E-05 \\ %\hline + Input matrix size & N$_{x}$ = 150 x 150 x 150\\ \hline + \end{tabular} +Table 6 : CPU Power impact \\ + +\end{footnotesize} + + +\begin{figure} [ht!] +\centering +\includegraphics[width=100mm]{cpu_power_impact_on_execution_time.pdf} +\caption{CPU Power impact on execution time} +%\label{overflow}} +\end{figure} + +Using the SIMGRID simulator flexibility, we have tried to determine the +impact on the algorithms performance in varying the CPU power of the +clusters nodes from 1 to 19 GFlops. The outputs depicted in the figure 6 +confirm the performance gain, around 95\% for both of the two methods, +after adding more powerful CPU. Note that the execution time axis in the +figure is in logarithmic scale. + +\subsection{Comparing GMRES in native synchronous mode and +Multisplitting algorithms in asynchronous mode} + +The previous paragraphs put in evidence the interests to simulate the +behavior of the application before any deployment in a real environment. +We have focused the study on analyzing the performance in varying the +key factors impacting the results. In the same line, the study compares +the performance of the two proposed methods in \textbf{synchronous mode +}. In this section, with the same previous methodology, the goal is to +demonstrate the efficiency of the multisplitting method in \textbf{ +asynchronous mode} compare with the classical GMRES staying in the +synchronous mode. + +Note that the interest of using the asynchronous mode for data exchange +is mainly, in opposite of the synchronous mode, the non-wait aspects of +the current computation after a communication operation like sending +some data between nodes. Each processor can continue their local +calculation without waiting for the end of the communication. Thus, the +asynchronous may theoretically reduce the overall execution time and can +improve the algorithm performance. + +As stated supra, SIMGRID simulator tool has been used to prove the +efficiency of the multisplitting in asynchronous mode and to find the +best combination of the grid resources (CPU, Network, input matrix size, +\ldots ) to get the highest "\,relative gain" in comparison with the +classical GMRES time. + + +The test conditions are summarized in the table below : \\ + +% environment +\begin{footnotesize} +\begin{tabular}{r c } + \hline + Grid & 2x50 totaling 100 processors\\ %\hline + Processors & 1 GFlops to 1.5 GFlops\\ + Intra-Network & bw=1.25 Gbits - lat=5E-05 \\ %\hline + Inter-Network & bw=5 Mbits - lat=2E-02\\ + Input matrix size & N$_{x}$ = From 62 to 150\\ %\hline + Residual error precision: 10$^{-5}$ to 10$^{-9}$\\ \hline \\ + \end{tabular} +\end{footnotesize} + +Again, comprehensive and extensive tests have been conducted varying the +CPU power and the network parameters (bandwidth and latency) in the +simulator tool with different problem size. The relative gains greater +than 1 between the two algorithms have been captured after each step of +the test. Table I below has recorded the best grid configurations +allowing a multiplitting method time more than 2.5 times lower than +classical GMRES execution and convergence time. The finding thru this +experimentation is the tolerance of the multisplitting method under a +low speed network that we encounter usually with distant clusters thru the +internet. + +% use the same column width for the following three tables +\newlength{\mytablew}\settowidth{\mytablew}{\footnotesize\np{E-11}} +\newenvironment{mytable}[1]{% #1: number of columns for data + \renewcommand{\arraystretch}{1.3}% + \begin{tabular}{|>{\bfseries}r% + |*{#1}{>{\centering\arraybackslash}p{\mytablew}|}}}{% + \end{tabular}} + +\begin{table}[!t] + \centering + \caption{Relative gain of the multisplitting algorithm compared with +the classical GMRES} + \label{"Table 7"} + + \begin{mytable}{6} + \hline + bandwidth (Mbit/s) + & 5 & 5 & 5 & 5 & 5 \\ + \hline + latency (ms) + & 20 & 20 & 20 & 20 & 20 \\ + \hline + power (GFlops) + & 1 & 1 & 1 & 1.5 & 1.5 \\ + \hline + size (N) + & 62 & 62 & 62 & 100 & 100 \\ + \hline + Precision + & \np{E-5} & \np{E-8} & \np{E-9} & \np{E-11} & \np{E-11} \\ + \hline + Relative gain + & 2.52 & 2.55 & 2.52 & 2.57 & 2.54 \\ + \hline + \end{mytable} + + \smallskip + + \begin{mytable}{6} + \hline + bandwidth (Mbit/s) + & 50 & 50 & 50 & 50 & 50 \\ + \hline + latency (ms) + & 20 & 20 & 20 & 20 & 20 \\ + \hline + power (GFlops) + & 1.5 & 1.5 & 1 & 1.5 & 1.5 \\ + \hline + size (N) + & 110 & 120 & 130 & 140 & 150 \\ + \hline + Precision + & \np{E-11} & \np{E-11} & \np{E-11} & \np{E-11} & \np{E-11}\\ + \hline + Relative gain + & 2.53 & 2.51 & 2.58 & 2.55 & 2.54 \\ + \hline + \end{mytable} +\end{table} + +\section{Conclusion} +CONCLUSION + + +\section*{Acknowledgment} + + +The authors would like to thank\dots{} + + +\bibliographystyle{wileyj} +\bibliography{biblio} + +\end{document} + +%%% Local Variables: +%%% mode: latex +%%% TeX-master: t +%%% fill-column: 80 +%%% ispell-local-dictionary: "american" +%%% End: