X-Git-Url: https://bilbo.iut-bm.univ-fcomte.fr/and/gitweb/rce2015.git/blobdiff_plain/56dc4d55704617d8f459826573f8bd2beeb5b5b3..f63c6fdeff0469b90e60afdbaaf960959126aefc:/paper.tex?ds=inline diff --git a/paper.tex b/paper.tex index 7fd9704..8a55530 100644 --- a/paper.tex +++ b/paper.tex @@ -24,6 +24,8 @@ % Extension pour les liens intra-documents (tagged PDF) % et l'affichage correct des URL (commande \url{http://example.com}) %\usepackage{hyperref} +\usepackage{multirow} + \usepackage{url} \DeclareUrlCommand\email{\urlstyle{same}} @@ -317,9 +319,9 @@ where $x_\ell$ are sub-vectors of the solution $x$, $b_\ell$ are the sub-vectors A_{\ell\ell} x_\ell = c_\ell,\mbox{~for~}\ell=1,\ldots,L, \label{eq:03} \end{equation} -where right-hand sides $c_\ell=b_\ell-\sum_{m\neq\ell}A_{\ell m}x_m$ are computed using the shared vectors $x_m$. In this paper, we use the well-known iterative method GMRES ({\it Generalized Minimal RESidual})~\cite{saad86} as an inner iteration to approximate the solutions of the different splittings arising from the block Jacobi multisplitting of matrix $A$. The algorithm in Figure~\ref{alg:01} shows the main key points of our block Jacobi two-stage method executed by a cluster of processors. In line~\ref{solve}, the linear sub-system~(\ref{eq:03}) is solved in parallel using GMRES method where $\MIG$ and $\TOLG$ are the maximum number of inner iterations and the tolerance threshold for GMRES respectively. The convergence of the two-stage multisplitting methods, based on synchronous or asynchronous iterations, has been studied by many authors for example~\cite{Bru95,bahi07}. +where right-hand sides $c_\ell=b_\ell-\sum_{m\neq\ell}A_{\ell m}x_m$ are computed using the shared vectors $x_m$. In this paper, we use the well-known iterative method GMRES~\cite{saad86} as an inner iteration to approximate the solutions of the different splittings arising from the block Jacobi multisplitting of matrix $A$. The algorithm in Figure~\ref{alg:01} shows the main key points of our block Jacobi two-stage method executed by a cluster of processors. In line~\ref{solve}, the linear sub-system~(\ref{eq:03}) is solved in parallel using GMRES method where $\MIG$ and $\TOLG$ are the maximum number of inner iterations and the tolerance threshold for GMRES respectively. The convergence of the two-stage multisplitting methods, based on synchronous or asynchronous iterations, has been studied by many authors for example~\cite{Bru95,bahi07}. -\begin{figure}[t] +\begin{figure}[htpb] %\begin{algorithm}[t] %\caption{Block Jacobi two-stage multisplitting method} \begin{algorithmic}[1] @@ -357,7 +359,7 @@ At each $s$ outer iterations, the algorithm computes a new approximation $\tilde \end{equation} The algorithm in Figure~\ref{alg:02} includes the procedure of the residual minimization and the outer iteration is restarted with a new approximation $\tilde{x}$ at every $s$ iterations. The least-squares problem~(\ref{eq:06}) is solved in parallel by all clusters using CGLS method~\cite{Hestenes52} such that $\MIC$ is the maximum number of iterations and $\TOLC$ is the tolerance threshold for this method (line~\ref{cgls} in Figure~\ref{alg:02}). -\begin{figure}[t] +\begin{figure}[htbp] %\begin{algorithm}[t] %\caption{Krylov two-stage method using block Jacobi multisplitting} \begin{algorithmic}[1] @@ -386,37 +388,31 @@ The algorithm in Figure~\ref{alg:02} includes the procedure of the residual mini \subsection{Simulation of the two-stage methods using SimGrid toolkit} \label{sec:04.02} -One of our objectives when simulating the application in Simgrid is, as in real +One of our objectives when simulating the application in SimGrid is, as in real life, to get accurate results (solutions of the problem) but also to ensure the test reproducibility under the same conditions. According to our experience, -very few modifications are required to adapt a MPI program for the Simgrid +very few modifications are required to adapt a MPI program for the SimGrid simulator using SMPI (Simulator MPI). The first modification is to include SMPI -libraries and related header files (smpi.h). The second modification is to +libraries and related header files (\verb+smpi.h+). The second modification is to suppress all global variables by replacing them with local variables or using a -Simgrid selector called "runtime automatic switching" +SimGrid selector called "runtime automatic switching" (smpi/privatize\_global\_variables). Indeed, global variables can generate side effects on runtime between the threads running in the same process and generated by -Simgrid to simulate the grid environment. - -%\RC{On vire cette phrase ?} \RCE {Si c'est la phrase d'avant sur les threads, je pense qu'on peut la retenir car c'est l'explication du pourquoi Simgrid n'aime pas les variables globales. Si c'est pas bien dit, on peut la reformuler. Si c'est la phrase ci-apres, effectivement, on peut la virer si elle preterais a discussion}The -%last modification on the MPI program pointed out for some cases, the review of -%the sequence of the MPI\_Isend, MPI\_Irecv and MPI\_Waitall instructions which -%might cause an infinite loop. +SimGrid to simulate the grid environment. - -\paragraph{Simgrid Simulator parameters} -\ \\ \noindent Before running a Simgrid benchmark, many parameters for the +\paragraph{Parameters of the simulation in SimGrid} +\ \\ \noindent Before running a SimGrid benchmark, many parameters for the computation platform must be defined. For our experiments, we consider platforms in which several clusters are geographically distant, so there are intra and inter-cluster communications. In the following, these parameters are described: \begin{itemize} - \item hostfile: hosts description file. + \item hostfile: hosts description file, \item platform: file describing the platform architecture: clusters (CPU power, -\dots{}), intra cluster network description, inter cluster network (bandwidth bw, -latency lat, \dots{}). +\dots{}), intra cluster network description, inter cluster network (bandwidth $bw$, +latency $lat$, \dots{}), \item archi : grid computational description (number of clusters, number of -nodes/processors for each cluster). +nodes/processors in each cluster). \end{itemize} \noindent In addition, the following arguments are given to the programs at runtime: @@ -424,8 +420,8 @@ In addition, the following arguments are given to the programs at runtime: \begin{itemize} \item maximum number of inner iterations $\MIG$ and outer iterations $\MIM$, \item inner precision $\TOLG$ and outer precision $\TOLM$, - \item matrix sizes of the 3D Poisson problem: N$_{x}$, N$_{y}$ and N$_{z}$ on axis $x$, $y$ and $z$ respectively, - \item matrix diagonal value is fixed to $6.0$ for synchronous Krylov multisplitting experiments and $6.2$ for asynchronous block Jacobi experiments, + \item matrix sizes of the problem: N$_{x}$, N$_{y}$ and N$_{z}$ on axis $x$, $y$ and $z$ respectively (in our experiments, we solve 3D problem, see Section~\ref{3dpoisson}), + \item matrix diagonal value is fixed to $6.0$ for synchronous experiments and $6.2$ for asynchronous ones, \item matrix off-diagonal value is fixed to $-1.0$, \item number of vectors in matrix $S$ (i.e. value of $s$), \item maximum number of iterations $\MIC$ and precision $\TOLC$ for CGLS method, @@ -434,19 +430,18 @@ In addition, the following arguments are given to the programs at runtime: \item execution mode: synchronous or asynchronous. \end{itemize} -It should also be noticed that both solvers have been executed with the Simgrid selector \texttt{-cfg=smpi/running\_power} which determines the computational power (here 19GFlops) of the simulator host machine. +It should also be noticed that both solvers have been executed with the SimGrid selector \texttt{-cfg=smpi/running\_power} which determines the computational power (here 19GFlops) of the simulator host machine. %%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%% -\section{Experimental Results} +\section{Experimental results} \label{sec:expe} -In this section, experiments for both Multisplitting algorithms are reported. First the 3D Poisson problem used in our experiments is described. +In this section, experiments for both multisplitting algorithms are reported. First the 3D Poisson problem used in our experiments is described. \subsection{The 3D Poisson problem} - - +\label{3dpoisson} We use our two-stage algorithms to solve the well-known Poisson problem $\nabla^2\phi=f$~\cite{Polyanin01}. In three-dimensional Cartesian coordinates in $\mathbb{R}^3$, the problem takes the following form: \begin{equation} \frac{\partial^2}{\partial x^2}\phi(x,y,z)+\frac{\partial^2}{\partial y^2}\phi(x,y,z)+\frac{\partial^2}{\partial z^2}\phi(x,y,z)=f(x,y,z)\mbox{~in the domain~}\Omega @@ -478,9 +473,9 @@ have been chosen for the study in this paper. \\ \textbf{Step 2}: Collect the software materials needed for the experimentation. In our case, we have two variants algorithms for the resolution of the -3D-Poisson problem: (1) using the classical GMRES; (2) and the Multisplitting -method. In addition, the Simgrid simulator has been chosen to simulate the -behaviors of the distributed applications. Simgrid is running in a virtual +3D-Poisson problem: (1) using the classical GMRES; (2) and the multisplitting +method. In addition, the SimGrid simulator has been chosen to simulate the +behaviors of the distributed applications. SimGrid is running in a virtual machine on a simple laptop. \\ \textbf{Step 3}: Fix the criteria which will be used for the future @@ -488,14 +483,11 @@ results comparison and analysis. In the scope of this study, we retain on the one hand the algorithm execution mode (synchronous and asynchronous) and on the other hand the execution time and the number of iterations to reach the convergence. \\ -\textbf{Step 4 }: Set up the different grid testbed environments that will be -simulated in the simulator tool to run the program. The following architecture -has been configured in Simgrid : 2x16, 4x8, 4x16, 8x8 and 2x50. The first number +\textbf{Step 4}: Set up the different grid testbed environments that will be +simulated in the simulator tool to run the program. The following architectures +have been configured in SimGrid : 2$\times$16, 4$\times$8, 4$\times$16, 8$\times$8 and 2$\times$50. The first number represents the number of clusters in the grid and the second number represents -the number of hosts (processors/cores) in each cluster. The network has been -designed to operate with a bandwidth equals to 10Gbits (resp. 1Gbits/s) and a -latency of 8.10$^{-6}$ seconds (resp. 5.10$^{-5}$) for the intra-clusters links -(resp. inter-clusters backbone links). \\ +the number of hosts (processors/cores) in each cluster. \\ \textbf{Step 5}: Conduct an extensive and comprehensive testings within these configurations by varying the key parameters, especially @@ -504,8 +496,7 @@ input data. \\ \textbf{Step 6} : Collect and analyze the output results. -\subsection{Factors impacting distributed applications performance in -a grid environment} +\subsection{Factors impacting distributed applications performance in a grid environment} When running a distributed application in a computational grid, many factors may have a strong impact on the performance. First of all, the architecture of the @@ -518,10 +509,10 @@ Another important factor impacting the overall performance of the application is the network configuration. Two main network parameters can modify drastically the program output results: \begin{enumerate} -\item the network bandwidth (bw=bits/s) also known as "the data-carrying +\item the network bandwidth ($bw$ in bits/s) also known as "the data-carrying capacity" of the network is defined as the maximum of data that can transit from one point to another in a unit of time. -\item the network latency (lat : microsecond) defined as the delay from the +\item the network latency ($lat$ in microseconds) defined as the delay from the start time to send a simple data from a source to a destination. \end{enumerate} Upon the network characteristics, another impacting factor is the volume of data exchanged between the nodes in the cluster @@ -532,107 +523,113 @@ and between distant clusters. This parameter is application dependent. on the other hand, the "inter-network" which is the backbone link between clusters. In practice, these two networks have different speeds. The intra-network generally works like a high speed local network with a - high bandwith and very low latency. In opposite, the inter-network connects - clusters sometime via heterogeneous networks components throuth internet with + high bandwidth and very low latency. In opposite, the inter-network connects + clusters sometime via heterogeneous networks components through internet with a lower speed. The network between distant clusters might be a bottleneck for the global performance of the application. -\subsection{Comparison of GMRES and Krylov Multisplitting algorithms in synchronous mode} -In the scope of this paper, our first objective is to analyze when the Krylov -Multisplitting method has better performance than the classical GMRES -method. With a synchronous iterative method, better performance means a -smaller number of iterations and execution time before reaching the convergence. -For a systematic study, the experiments should figure out that, for various -grid parameters values, the simulator will confirm the targeted outcomes, -particularly for poor and slow networks, focusing on the impact on the -communication performance on the chosen class of algorithm. +\subsection{Comparison between GMRES and two-stage multisplitting algorithms in synchronous mode} +In the scope of this paper, our first objective is to analyze when the synchronous Krylov two-stage method has better performance than the classical GMRES method. With a synchronous iterative method, better performance means a smaller number of iterations and execution time before reaching the convergence. In what follows, we will present the test conditions, the output results and our comments. For all simulations, we fix the network parameters of the intra-cluster links: the bandwidth $bw$=10Gbs and the latency $lat$=8$\times$10$^{-6}$. -The following paragraphs present the test conditions, the output results -and our comments.\\ +\subsubsection{Simulations for various grid architectures and scaling-up matrix sizes} +\ \\ +% environment + The network of intra-clusters links has been +designed to operate with a bandwidth equals to 10Gbits and a latency of 8$\times$10$^{-6}$ seconds. \\ -\subsubsection{Execution of the algorithms on various computational grid -architectures and scaling up the input matrix size} -\ \\ -% environment +\RC{Je ne comprends plus rien CE : pourquoi dans 5.4.1 il y a 2 network et aussi dans 5.4.2. Quelle est la différence? Dans la figure 3 de la section 5.4.1 pourquoi il n'y a pas N1 et N2?} \begin{table} [ht!] \begin{center} -\begin{tabular}{r c } +\begin{tabular}{ll } \hline - Grid Architecture & 2x16, 4x8, 4x16 and 8x8\\ %\hline - Network & N2 : bw=1Gbits/s - lat=5.10$^{-5}$ \\ %\hline - Input matrix size & N$_{x}$ $\times$ N$_{y}$ $\times$ N$_{z}$ =150 $\times$ 150 $\times$ 150\\ %\hline - - & N$_{x}$ $\times$ N$_{y}$ $\times$ N$_{z}$ =170 $\times$ 170 $\times$ 170 \\ \hline + Grid architecture & 2$\times$16, 4$\times$8, 4$\times$16 and 8$\times$8\\ %\hline + \multirow{2}{*}{Network} & Inter (N2): $bw$=1Gbs, $lat$=5$\times$10$^{-5}$ \\ %\hline + & Intra (N1): $bw$=10Gbs, $lat$=8$\times$10$^{-6}$ \\ + \multirow{2}{*}{Matrix size} & N$_{x}$ $\times$ N$_{y}$ $\times$ N$_{z}$ =150 $\times$ 150 $\times$ 150\\ %\hline + & N$_{x}$ $\times$ N$_{y}$ $\times$ N$_{z}$ =170 $\times$ 170 $\times$ 170 \\ \hline \end{tabular} -\caption{Test conditions: various grid configurations with the input matix size N$_{x}$=150 or N$_{x}$=170 \RC{N2 n'est pas défini..}\RC{Nx est défini, Ny? Nz?} -\AG{La lettre 'x' n'est pas le symbole de la multiplication. Utiliser \texttt{\textbackslash times}. Idem dans le texte, les figures, etc.}} +\caption{Test conditions: various grid configurations with the matrix sizes 150$^3$ or 170$^3$} +%\LZK{Ce sont les caractéristiques du réseau intra ou inter clusters? Ce n'est pas précisé...} +%\RCE{oui c est precise} \label{tab:01} \end{center} \end{table} - - - -In this section, we analyze the performance of algorithms running on various -grid configurations (2x16, 4x8, 4x16 and 8x8). First, the results in Figure~\ref{fig:01} -show for all grid configurations the non-variation of the number of iterations of -classical GMRES for a given input matrix size; it is not the case for the -multisplitting method. - -\RC{CE attention tu n'as pas mis de label dans tes figures, donc c'est le bordel, j'en mets mais vérifie...} -\RC{Les légendes ne sont pas explicites...} - - -\begin{figure} [ht!] +In this section, we analyze the simulations conducted on various grid +configurations presented in Table~\ref{tab:01}. It should be noticed that two +networks are considered: N1 is the network between clusters (inter-cluster) and +N2 is the network inside a cluster (intra-cluster). Figure~\ref{fig:01} shows, +for all grid configurations and a given matrix size, a non-variation in the +number of iterations for the classical GMRES algorithm, which is not the case of +the Krylov two-stage algorithm. +%% First, the results in Figure~\ref{fig:01} +%% show for all grid configurations the non-variation of the number of iterations of +%% classical GMRES for a given input matrix size; it is not the case for the +%% multisplitting method. +%\RC{CE attention tu n'as pas mis de label dans tes figures, donc c'est le bordel, j'en mets mais vérifie...} +%\RC{Les légendes ne sont pas explicites...} +%\RCE{Corrige} + +\begin{figure} [htbp] \begin{center} \includegraphics[width=100mm]{cluster_x_nodes_nx_150_and_nx_170.pdf} \end{center} - \caption{Various grid configurations with the input matrix size $N_{x}=150$ and $N_{x}=170$\RC{idem} -\AG{Utiliser le point comme séparateur décimal et non la virgule. Idem dans les autres figures.}} + \caption{Various grid configurations with the matrix sizes 150$^3$ and 170$^3$} +%\AG{Utiliser le point comme séparateur décimal et non la virgule. Idem dans les autres figures.} +%\LZK{Pour quelle taille du problème sont calculés les nombres d'itérations? Que représente le 2 Clusters x 16 Nodes with Nx=150 and Nx=170 en haut de la figure?} + %\RCE {Corrige} + \RC{Idéalement dans la légende il faudrait insiquer Pb size=$150^3$ ou $170^3$ car pour l'instant Nx=150 ca n'indique rien concernant Ny et Nz} \label{fig:01} \end{figure} + The execution times between the two algorithms is significant with different -grid architectures, even with the same number of processors (for example, 2x16 -and 4x8). We can observ the low sensitivity of the Krylov multisplitting method +grid architectures, even with the same number of processors (for example, 2 $\times$ 16 +and 4 $\times 8$). We can observe a better sensitivity of the Krylov multisplitting method (compared with the classical GMRES) when scaling up the number of the processors in the grid: in average, the GMRES (resp. Multisplitting) algorithm performs -$40\%$ better (resp. $48\%$) when running from 2x16=32 to 8x8=64 processors. \RC{pas très clair, c'est pas précis de dire qu'un algo perform mieux qu'un autre, selon quel critère?} +$40\%$ better (resp. $48\%$) when running from 32 (grid 2 $\times$ 16) to 64 processors/cores (grid 8 $\times$ 8). Note that even with a grid 8 $\times$ 8 having the maximum number of clusters, the execution time of the multisplitting method is in average 32\% less compared to GMRES. +\RC{pas très clair, c'est pas précis de dire qu'un algo perform mieux qu'un autre, selon quel critère?} +\LZK{A revoir toute cette analyse... Le multi est plus performant que GMRES. Les temps d'exécution de multi sont sensibles au nombre de CLUSTERS. Il est moins performant pour un nombre grand de cluster. Avez vous d'autres remarques?} +\RCE{Remarquez que meme avec une grille 8x8, le multi est toujours plus performant} -\subsubsection{Running on two different inter-clusters network speeds \\} +\subsubsection{Simulations for two different inter-clusters network speeds \\} \begin{table} [ht!] \begin{center} -\begin{tabular}{r c } +\begin{tabular}{ll} \hline - Grid Architecture & 2x16, 4x8\\ %\hline - Network & N1 : bw=10Gbs-lat=8.10$^{-6}$ \\ %\hline - - & N2 : bw=1Gbs-lat=5.10$^{-5}$ \\ - Input matrix size & $N_{x} \times N_{y} \times N_{z} =150 \times 150 \times 150$\\ \hline + Grid architecture & 2$\times$16, 4$\times$8\\ %\hline + \multirow{2}{*}{Inter Network} & N1: $bw$=1Gbs, $lat$=5$\times$10$^{-5}$ \\ %\hline + & N2: $bw$=10Gbs, $lat$=8$\times$10$^{-6}$ \\ + Matrix size & $N_{x} \times N_{y} \times N_{z} =150 \times 150 \times 150$\\ \hline \end{tabular} -\caption{Test conditions: grid 2x16 and 4x8 with networks N1 vs N2} +\caption{Test conditions: grid configurations 2$\times$16 and 4$\times$8 with networks N1 vs. N2} \label{tab:02} \end{center} \end{table} -These experiments compare the behavior of the algorithms running first on a -speed inter-cluster network (N1) and also on a less performant network (N2). \RC{Il faut définir cela avant...} +In this section, the experiments compare the behavior of the algorithms running on a +speeder inter-cluster network (N2) and also on a less performant network (N1) respectively defined in the test conditions Table~\ref{tab:02}. +%\RC{Il faut définir cela avant...} Figure~\ref{fig:02} shows that end users will reduce the execution time -for both algorithms when using a grid architecture like 4x16 or 8x8: the reduction is about $2$. The results depict also that when +for both algorithms when using a grid architecture like 4 $\times$ 16 or 8 $\times$ 8: the reduction factor is around $2$. The results depict also that when the network speed drops down (variation of 12.5\%), the difference between the two Multisplitting algorithms execution times can reach more than 25\%. %\begin{wrapfigure}{l}{100mm} -\begin{figure} [ht!] +\begin{figure} [htbp] \centering \includegraphics[width=100mm]{cluster_x_nodes_n1_x_n2.pdf} -\caption{Grid 2x16 and 4x8 with networks N1 vs N2 -\AG{\np{8E-6}, \np{5E-6} au lieu de 8E-6, 5E-6}} +\caption{Various grid configurations with networks N1 vs N2} +%\AG{\np{8E-6}, \np{5E-6} au lieu de 8E-6, 5E-6}} +%\RCE{Corrige} \label{fig:02} \end{figure} %\end{wrapfigure} @@ -644,35 +641,31 @@ the network speed drops down (variation of 12.5\%), the difference between t \centering \begin{tabular}{r c } \hline - Grid Architecture & 2x16\\ %\hline - Network & N1 : bw=1Gbs \\ %\hline + Grid Architecture & 2 $\times$ 16\\ %\hline + \multirow{2}{*}{Inter Network N1} & $bw$=1Gbs, \\ %\hline + & $lat$= From 8$\times$10$^{-6}$ to $6.10^{-5}$ second \\ Input matrix size & $N_{x} \times N_{y} \times N_{z} = 150 \times 150 \times 150$\\ \hline \end{tabular} \caption{Test conditions: network latency impacts} \label{tab:03} \end{table} - - -\begin{figure} [ht!] +\begin{figure} [htbp] \centering \includegraphics[width=100mm]{network_latency_impact_on_execution_time.pdf} -\caption{Network latency impacts on execution time -\AG{\np{E-6}}} +\caption{Network latency impacts on execution time} +%\AG{\np{E-6}}} \label{fig:03} \end{figure} +In Table~\ref{tab:03}, parameters for the influence of the network latency are +reported. According to the results of Figure~\ref{fig:03}, a degradation of the +network latency from $8.10^{-6}$ to $6.10^{-5}$ implies an absolute time +increase of more than $75\%$ (resp. $82\%$) of the execution for the classical +GMRES (resp. Krylov multisplitting) algorithm. The execution time factor +between the two algorithms varies from 2.2 to 1.5 times with a network latency +decreasing from $8.10^{-6}$ to $6.10^{-5}$. -According to the results of Figure~\ref{fig:03}, a degradation of the network -latency from $8.10^{-6}$ to $6.10^{-5}$ implies an absolute time increase of -more than $75\%$ (resp. $82\%$) of the execution for the classical GMRES -(resp. Krylov multisplitting) algorithm. In addition, it appears that the -Krylov multisplitting method tolerates more the network latency variation with a -less rate increase of the execution time.\RC{Les 2 précédentes phrases me - semblent en contradiction....} Consequently, in the worst case ($lat=6.10^{-5 -}$), the execution time for GMRES is almost the double than the time of the -Krylov multisplitting, even though, the performance was on the same order of -magnitude with a latency of $8.10^{-6}$. \subsubsection{Network bandwidth impacts on performance} \ \\ @@ -680,20 +673,24 @@ magnitude with a latency of $8.10^{-6}$. \centering \begin{tabular}{r c } \hline - Grid Architecture & 2x16\\ %\hline - Network & N1 : bw=1Gbs - lat=5.10$^{-5}$ \\ %\hline + Grid Architecture & 2 $\times$ 16\\ %\hline +\multirow{2}{*}{Inter Network N1} & $bw$=From 1Gbs to 10 Gbs \\ %\hline + & $lat$= 5.10$^{-5}$ second \\ Input matrix size & $N_{x} \times N_{y} \times N_{z} =150 \times 150 \times 150$\\ \hline \\ \end{tabular} -\caption{Test conditions: Network bandwidth impacts\RC{Qu'est ce qui varie ici? Il n'y a pas de variation dans le tableau}} +\caption{Test conditions: Network bandwidth impacts} +% \RC{Qu'est ce qui varie ici? Il n'y a pas de variation dans le tableau} +%\RCE{C est le bw} \label{tab:04} \end{table} -\begin{figure} [ht!] +\begin{figure} [htbp] \centering \includegraphics[width=100mm]{network_bandwith_impact_on_execution_time.pdf} -\caption{Network bandwith impacts on execution time -\AG{``Execution time'' avec un 't' minuscule}. Idem autres figures.} +\caption{Network bandwith impacts on execution time} +%\AG{``Execution time'' avec un 't' minuscule}. Idem autres figures.} +%\RCE{Corrige} \label{fig:04} \end{figure} @@ -709,49 +706,47 @@ of $40\%$ which is only around $24\%$ for the classical GMRES. \centering \begin{tabular}{r c } \hline - Grid Architecture & 4x8\\ %\hline - Network & N2 : bw=1Gbs - lat=5.10$^{-5}$ \\ - Input matrix size & $N_{x}$ = From 40 to 200\\ \hline + Grid Architecture & 4 $\times$ 8\\ %\hline + Inter Network & $bw$=1Gbs - $lat$=5.10$^{-5}$ \\ + Input matrix size & $N_{x} \times N_{y} \times N_{z}$ = From 50$^{3}$ to 190$^{3}$\\ \hline \end{tabular} \caption{Test conditions: Input matrix size impacts} \label{tab:05} \end{table} -\begin{figure} [ht!] +\begin{figure} [htbp] \centering \includegraphics[width=100mm]{pb_size_impact_on_execution_time.pdf} \caption{Problem size impacts on execution time} \label{fig:05} \end{figure} -In these experiments, the input matrix size has been set from $N_{x} = N_{y} -= N_{z} = 40$ to $200$ side elements that is from $40^{3} = 64.000$ to $200^{3} -= 8,000,000$ points. Obviously, as shown in Figure~\ref{fig:05}, the execution -time for both algorithms increases when the input matrix size also increases. -But the interesting results are: -\begin{enumerate} - \item the drastic increase ($10$ times) of the number of iterations needed to - reach the convergence for the classical GMRES algorithm when the matrix size - go beyond $N_{x}=150$; \RC{C'est toujours pas clair... ok le nommbre d'itérations est 10 fois plus long mais la suite de la phrase ne veut rien dire} -\item the classical GMRES execution time is almost the double for $N_{x}=140$ - compared with the Krylov multisplitting method. -\end{enumerate} +In these experiments, the input matrix size has been set from $50^3$ to +$190^3$. Obviously, as shown in Figure~\ref{fig:05}, the execution time for both +algorithms increases when the input matrix size also increases. For all problem +sizes, GMRES is always slower than the Krylov multisplitting. Moreover, for this +benchmark, it seems that the greater the problem size is, the bigger the ratio +between both algorithm execution times is. We can also observ that for some +problem sizes, the Krylov multisplitting convergence varies quite a +lot. Consequently the execution times in that cases also varies. + These findings may help a lot end users to setup the best and the optimal targeted environment for the application deployment when focusing on the problem size scale up. It should be noticed that the same test has been done with the -grid 2x16 leading to the same conclusion. +grid 2 $\times$ 16 leading to the same conclusion. \subsubsection{CPU Power impacts on performance} -\begin{table} [ht!] +\begin{table} [htbp] \centering \begin{tabular}{r c } \hline - Grid architecture & 2x16\\ %\hline - Network & N2 : bw=1Gbs - lat=5.10$^{-5}$ \\ %\hline - Input matrix size & $N_{x} = 150 \times 150 \times 150$\\ \hline + Grid architecture & 2 $\times$ 16\\ %\hline + Inter Network & N2 : $bw$=1Gbs - $lat$=5.10$^{-5}$ \\ %\hline + Input matrix size & $N_{x} = 150 \times 150 \times 150$\\ + CPU Power & From 3 to 19 GFlops \\ \hline \end{tabular} \caption{Test conditions: CPU Power impacts} \label{tab:06} @@ -796,21 +791,23 @@ synchronization with the other processors. Thus, the asynchronous may theoretically reduce the overall execution time and can improve the algorithm performance. -\RC{la phrase suivante est bizarre, je ne comprends pas pourquoi elle vient ici} -In this section, Simgrid simulator tool has been successfully used to show -the efficiency of the multisplitting in asynchronous mode and to find the best -combination of the grid resources (CPU, Network, input matrix size, \ldots ) to -get the highest \textit{"relative gain"} (exec\_time$_{GMRES}$ / -exec\_time$_{multisplitting}$) in comparison with the classical GMRES time. +In this section, the Simgrid simulator is used to compare the behavior of the +multisplitting in asynchronous mode with GMRES in synchronous mode. Several +benchmarks have been performed with various combination of the grid resources +(CPU, Network, input matrix size, \ldots ). The test conditions are summarized +in Table~\ref{tab:07}. In order to compare the execution times, this table +reports the relative gain between both algorithms. It is defined by the ratio +between the execution time of GMRES and the execution time of the +multisplitting. The ration is greater than one because the asynchronous +multisplitting version is faster than GMRES. -The test conditions are summarized in the table~\ref{tab:07}: \\ -\begin{table} [ht!] +\begin{table} [htbp] \centering \begin{tabular}{r c } \hline - Grid Architecture & 2x50 totaling 100 processors\\ %\hline + Grid Architecture & 2 $\times$ 50 totaling 100 processors\\ %\hline Processors Power & 1 GFlops to 1.5 GFlops\\ Intra-Network & bw=1.25 Gbits - lat=5.10$^{-5}$ \\ %\hline Inter-Network & bw=5 Mbits - lat=2.10$^{-2}$\\ @@ -856,7 +853,7 @@ geographically distant clusters through the internet. power (GFlops) & 1 & 1 & 1 & 1.5 & 1.5 & 1.5 & 1.5 & 1 & 1.5 & 1.5 \\ \hline - size (N) + size ($N^3$) & 62 & 62 & 62 & 100 & 100 & 110 & 120 & 130 & 140 & 150 \\ \hline Precision