main.tex

   1 \documentclass{article}
   2 \usepackage{subfig}
   3 \usepackage{color}
   4 \usepackage{graphicx}
   5 \usepackage{url}
   6 \usepackage{cite}
   7
   8 % correct bad hyphenation here
   9 \hyphenation{op-tical net-works semi-conduc-tor}
  10
  11
  12 \begin{document}
  13 \title{Ancetre}
  14
  15
  16 \author{Jean-Fran\c cois Couchot,  and  Christophe Guyeux*\\
  17   FEMTO-ST Institute, UMR 6174 CNRS\\
  18   Computer Science Laboratory DISC,
  19   University of Franche-Comt\'{e},
  20   Besan\c con, France.\\
  21   \{jean-francois.couchot,  christophe.guyeux\}@femto-st.fr\\
  22  $*:$ Authors in alphabetic order.\\
  23 }
  24 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}
  25 \newcommand{\RC}[1]{\begin{color}{red}\textit{}\end{color}}
  26 \newcommand{\CG}[1]{\begin{color}{blue}\textit{}\end{color}}
  27 % make the title area
  28 \maketitle
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  33 %IEEEtran, journal, \LaTeX, paper, template.
  34
  35 \maketitle
  36
  37 \begin{abstract}
  38 \end{abstract}
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  47 \section{Introduction}\label{sec:intro}
  48 %\input{intro.tex}
  49 \input{art}
  50
  51 \section{Presentation of the Proposed Approach}\label{sec:ourapproach}
  52 \input{presentation}
  53
  54 \section{Experiments}\label{sec:experiments}
  55
  56
  57
  58 \section{First Stage: Genomes as Lists of Homologous Classes}
  59 \input{classEquiv}
  60
  61 \section{Second Stage: to Find Closed Genomes}
  62 \input{closedgenomes}
  63
  64
  65 \section{Third Stage: Reconstruction of Ancestral Syntheny Blocks for the two Closest Genomes}
  66 \input{syntheny}
  67 \section{Fourth Stage: Filling holes in the Obtained Ancestral Genome}
  68
  69 \section{Last Stage: to Reproduce the Process until Obtaining the Last Common Ancestor of the given set of Genomes}
  70
  71 \section{Conclusion}\label{sec:concl}
  72
  73
  74 \bibliographystyle{plain}
  75 \bibliography{biblio}
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  79 \end{document}
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