BookGPU/Chapters/chapter17/ch17.aux

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   2 \@writefile{toc}{\author{Guillaume Laville}{}}
   3 \@writefile{toc}{\author{Christophe Lang}{}}
   4 \@writefile{toc}{\author{Kamel Mazouzi}{}}
   5 \@writefile{toc}{\author{Nicolas Marilleau}{}}
   6 \@writefile{toc}{\author{B\IeC {\'e}n\IeC {\'e}dicte Herrmann}{}}
   7 \@writefile{toc}{\author{Laurent Philippe}{}}
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   9 \@writefile{toc}{\contentsline {chapter}{\numberline {16}Implementing MAS on GPU}{363}}
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  12 \newlabel{chapter17}{{16}{364}}
  13 \@writefile{toc}{\contentsline {section}{\numberline {16.1}Introduction}{364}}
  14 \newlabel{ch17:intro}{{16.1}{364}}
  15 \@writefile{toc}{\contentsline {section}{\numberline {16.2}Running Agent-Based Simulations}{365}}
  16 \newlabel{ch17:ABM}{{16.2}{365}}
  17 \@writefile{toc}{\contentsline {subsection}{\numberline {16.2.1}Multi-agent systems and parallelism}{365}}
  18 \@writefile{toc}{\contentsline {subsection}{\numberline {16.2.2}MAS Implementation on GPU}{367}}
  19 \newlabel{ch17:subsec:gpu}{{16.2.2}{367}}
  20 \@writefile{toc}{\contentsline {section}{\numberline {16.3}A first practical example}{368}}
  21 \newlabel{ch17:sec:1stmodel}{{16.3}{368}}
  22 \@writefile{toc}{\contentsline {subsection}{\numberline {16.3.1}The Collembola model}{368}}
  23 \newlabel{ch17:subsec:collembolamodel}{{16.3.1}{368}}
  24 \@writefile{lof}{\contentsline {figure}{\numberline {16.1}{\ignorespaces Evolution algorithm of Collembola model\relax }}{369}}
  25 \newlabel{ch17:fig:collem_algorithm}{{16.1}{369}}
  26 \@writefile{toc}{\contentsline {subsection}{\numberline {16.3.2}Collembola Implementation}{369}}
  27 \newlabel{ch17:listing:collembola-diffuse}{{16.1}{370}}
  28 \@writefile{lol}{\contentsline {lstlisting}{\numberline {16.1}Collembola OpenCL Diffusion kernel}{370}}
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  30 \@writefile{lol}{\contentsline {lstlisting}{\numberline {16.2}Collembola OpenCL reduction kernel}{370}}
  31 \@writefile{toc}{\contentsline {subsection}{\numberline {16.3.3}Collembola performance}{371}}
  32 \@writefile{lof}{\contentsline {figure}{\numberline {16.2}{\ignorespaces Performance of the Collembola model on CPU and GPU\relax }}{372}}
  33 \newlabel{ch17:fig:mior_perfs_collem}{{16.2}{372}}
  34 \@writefile{toc}{\contentsline {section}{\numberline {16.4}Second example}{372}}
  35 \newlabel{ch17:sec:2ndmodel}{{16.4}{372}}
  36 \@writefile{toc}{\contentsline {subsection}{\numberline {16.4.1}The MIOR model}{372}}
  37 \newlabel{ch17:subsec:miormodel}{{16.4.1}{372}}
  38 \@writefile{loa}{\contentsline {algocf}{\numberline {16}{\ignorespaces Evolution step of each Meta-Mior (microbial colony) agent\relax }}{373}}
  39 \newlabel{ch17:seqalgo}{{16}{373}}
  40 \@writefile{toc}{\contentsline {subsection}{\numberline {16.4.2}MIOR Implementation}{373}}
  41 \@writefile{lof}{\contentsline {figure}{\numberline {16.3}{\ignorespaces Execution distribution retained on GPU\relax }}{374}}
  42 \newlabel{ch17:fig:gpu_distribution}{{16.3}{374}}
  43 \@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.1}Execution mapping on GPU}{374}}
  44 \@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.2}Data structures translation}{375}}
  45 \newlabel{ch17:subsec:datastructures}{{16.4.2.2}{375}}
  46 \newlabel{ch17:listing:mior_data_structures}{{16.3}{375}}
  47 \@writefile{lol}{\contentsline {lstlisting}{\numberline {16.3}Main data structures used in a MIOR simulation}{375}}
  48 \@writefile{lof}{\contentsline {figure}{\numberline {16.4}{\ignorespaces Compact representation of the topology of a MIOR simulation\relax }}{376}}
  49 \newlabel{ch17:fig:csr_representation}{{16.4}{376}}
  50 \@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.3}Critical resources access management}{376}}
  51 \newlabel{ch17:subsec:concurrency}{{16.4.2.3}{376}}
  52 \newlabel{ch17:listing:mior_kernels}{{16.4}{377}}
  53 \@writefile{lol}{\contentsline {lstlisting}{\numberline {16.4}Main MIOR kernel}{377}}
  54 \newlabel{ch17:fig:mior_launcher}{{16.5}{378}}
  55 \@writefile{lol}{\contentsline {lstlisting}{\numberline {16.5}MIOR simulation launcher}{378}}
  56 \@writefile{toc}{\contentsline {subsubsection}{\numberline {16.4.2.4}Termination detection}{378}}
  57 \@writefile{toc}{\contentsline {subsection}{\numberline {16.4.3}Performance of MIOR implementations}{379}}
  58 \newlabel{ch17:subsec:miorexperiments}{{16.4.3}{379}}
  59 \@writefile{lof}{\contentsline {figure}{\numberline {16.5}{\ignorespaces CPU and GPU performance on a Tesla C1060 node\relax }}{380}}
  60 \newlabel{ch17:fig:mior_perfs_tesla}{{16.5}{380}}
  61 \@writefile{lof}{\contentsline {figure}{\numberline {16.6}{\ignorespaces CPU and GPU performance on a personal computer with a Geforce 8800GT\relax }}{381}}
  62 \newlabel{ch17:fig:mior_perfs_8800gt}{{16.6}{381}}
  63 \@writefile{toc}{\contentsline {section}{\numberline {16.5}Analysis and recommendations}{381}}
  64 \newlabel{ch17:analysis}{{16.5}{381}}
  65 \@writefile{lof}{\contentsline {figure}{\numberline {16.7}{\ignorespaces Execution time of one multi-simulation kernel on the Tesla platform\relax }}{382}}
  66 \newlabel{ch17:fig:monokernel_graph}{{16.7}{382}}
  67 \@writefile{lof}{\contentsline {figure}{\numberline {16.8}{\ignorespaces Total execution time for 1000 simulations on the Tesla platform, while varying the number of simulations for each kernel\relax }}{382}}
  68 \newlabel{ch17:fig:multikernel_graph}{{16.8}{382}}
  69 \@writefile{toc}{\contentsline {subsection}{\numberline {16.5.1}Analysis}{382}}
  70 \@writefile{toc}{\contentsline {subsection}{\numberline {16.5.2}MAS execution workflow}{383}}
  71 \@writefile{toc}{\contentsline {subsection}{\numberline {16.5.3}Implementation challenges}{384}}
  72 \@writefile{toc}{\contentsline {subsection}{\numberline {16.5.4}MCSMA}{384}}
  73 \newlabel{ch17:Mcsma}{{16.5.4}{384}}
  74 \@writefile{toc}{\contentsline {section}{\numberline {16.6}Conclusion}{385}}
  75 \newlabel{ch17:conclusion}{{16.6}{385}}
  76 \@writefile{toc}{\contentsline {section}{Bibliography}{386}}
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