main.tex

   1 \documentclass{article}
   2 \usepackage{subfig}
   3 \usepackage{color}
   4 \usepackage{graphicx}
   5 \usepackage{url}
   6 \usepackage{cite}
   7 \usepackage{algorithm}
   8 \usepackage{algorithmic}
   9 \usepackage{pdflscape}
  10 \usepackage{authblk}
  11 \usepackage[T1]{fontenc}
  12 \usepackage{multirow,longtable}
  13 \usepackage{amsmath,mathtools}
  14 \usepackage{amssymb}
  15 \usepackage[standard]{ntheorem}
  16 \usepackage{stmaryrd}
  17 \usepackage[utf8]{inputenc}
  18 \usepackage{tikz}
  19 \usetikzlibrary{shapes,arrows}
  20
  21 % correct bad hyphenation here
  22 \hyphenation{op-tical net-works semi-conduc-tor}
  23
  24
  25 \title{Finding the Core-Genes of Plant Species Chloroplast}
  26 \author[1]{Bassam AlKindy} %\footnote{email: bassam.al-kindy@univ-fcomt\'{e}.fr}
  27 \author[1]{Jacques Bahi}
  28 \author[1]{Jean-Fran\c{c}ois Couchot}
  29 \author[1]{Christophe Guyeux}
  30 \author[2]{Arnaud Mouly}
  31 \author[1]{Michel Salomon}
  32 \affil[1]{FEMTO-ST Institute, UMR 6174 CNRS, Computer Science Department DISC, Universit\'{e} de Franche-Comt\'{e}, France}
  33 \affil[2]{Lab. Chrono-Environnement, UMR 6174 CNRS, Universit\'{e} de Franche-Comt\'{e}, France}
  34 %{\small \it Authors in alphabetic order}
  35
  36 \renewcommand\Authands{ and }
  37 \begin{document}
  38
  39 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}
  40 \newcommand{\CG}[1]{\begin{color}{blue}\textit{}\end{color}}
  41 % make the title area
  42
  43 \maketitle
  44
  45 %IEEEtran, journal, \LaTeX, paper, template.
  46 \input{abstract}
  47
  48 \section{Introduction}\label{sec:intro}
  49 \input{intro.tex}
  50
  51 \section{Similarity-based approach}
  52 % Main author : jfc
  53 \input{classEquiv}
  54
  55 \section{Annotation-based approaches}
  56 % Main author : bassam
  57 \input{annotated}
  58
  59 % \section{Second Stage: to Find Closed Genomes}
  60 % \input{closedgenomes}
  61 \section{Discussion}
  62 \input{discussion.tex}
  63 \section{Conclusion}\label{sec:concl}
  64 \input{conclusion}
  65
  66 \bibliographystyle{plain}
  67
  68 \bibliography{biblio}
  69
  70 \end{document}
  71
  72