Paper2/main.tex

   1 \documentclass{article}
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  20 \usepackage{blindtext}
  21
  22 % correct bad hyphenation here
  23 \hyphenation{op-tical net-works semi-conduc-tor}
  24
  25
  26 \title{Finding the Core-Genes of Chloroplasts based on Gene Similarity Approaches}
  27 \author[1,3]{Bassam Al Kindy} %\footnote{email: bassam.al-kindy@univ-fcomte.fr}
  28 \author[1,3]{Christophe Guyeux}
  29 \author[1,3]{Jean-Fran\c{c}ois Couchot}
  30 %\author[2,3]{Arnaud Mouly}
  31 \author[1,3]{Michel Salomon}
  32 \author[1,3]{Jacques M. Bahi}
  33 \affil[1]{FEMTO-ST Institute, UMR 6174 CNRS, DISC Computer Science Department\\ Universit\'{e} de Franche-Comt\'{e}, France}
  34 %\affil[2]{Chrono-Environnement Lab., UMR 6249 CNRS}
  35 %{\small \it Authors in alphabetic order}
  36 %\affil[3]{Universit\'{e} de Franche-Comt\'{e}, France}
  37 \renewcommand\Authands{ and }
  38
  39 \begin{document}
  40
  41 \maketitle
  42
  43 %IEEEtran, journal, \LaTeX, paper, template.
  44 \input{abstract}
  45
  46 \section{Introduction}\label{sec:intro}
  47 \input{intro.tex}
  48
  49
  50
  51 \section{An Overview}\label{sec:general}
  52 \input{general}
  53
  54 \section{Core genes extraction}
  55 \subsection{Similarity-based approach}\label{sec:simil}
  56 % Main author : jfc
  57 \input{classEquiv}
  58
  59 %\subsection{Annotation-based approach}\label{sec:annot}
  60 % Main author : bassam
  61 %\input{annotated}
  62 \subsection{Annotation based approach}
  63 \subsubsection{Quality-test approach}\label{sec:mixed}
  64 \input{Mixed}
  65
  66 %\section{Features visualization}\label{sec:features}
  67 %\input{Features}
  68
  69 \section{Implementation}\label{sec:implem}
  70 \input{implementation}
  71 %\section{Second Stage: to Find Closed Genomes}
  72 %\input{closedgenomes}
  73
  74 \section{Discussion}
  75 \input{discussion.tex}
  76 \section{Conclusion}\label{sec:concl}
  77 \input{conclusion}
  78
  79 \bigskip
  80
  81 \textit{Computations have been performed on the supercomputer facilities of the M\'esocentre
  82 de calcul de Franche-Comt\'e.}
  83
  84
  85 \bibliographystyle{plain}
  86
  87 \bibliography{biblio}
  88
  89 %\section{Appendix}
  90 %\input{appendix}
  91
  92 \end{document}