update version with discussion

[chloroplast13.git] / main.tex

diff --git a/main.tex b/main.tex
index 15a3a7a651b6431a51ae68eafd3cd69dce704133..963d74dfb8831779f58f122a3d79b2dc8170cb35 100755 (executable)
--- a/main.tex
+++ b/main.tex
@@ -6,34 +6,33 @@
 \usepackage{cite}
 \usepackage{algorithm}
 \usepackage{algorithmic}
 \usepackage{cite}
 \usepackage{algorithm}
 \usepackage{algorithmic}

-\usepackage{longtable}
+\usepackage{pdflscape}
+\usepackage{multirow,longtable}

 \usepackage{amsmath,mathtools}
 \usepackage{amsmath,mathtools}

+\usepackage{amssymb}
+\usepackage[standard]{ntheorem}
+\usepackage{stmaryrd}

 \usepackage[utf8]{inputenc}
 \usepackage[utf8]{inputenc}

-
+\usepackage{tikz}
+\usetikzlibrary{shapes,arrows}

 
 % correct bad hyphenation here
 \hyphenation{op-tical net-works semi-conduc-tor}
 
 % correct bad hyphenation here
 \hyphenation{op-tical net-works semi-conduc-tor}

-

  
 \begin{document}
 
 \title{Finding the core-genes of Chloroplast Species}
  
 \begin{document}
 
 \title{Finding the core-genes of Chloroplast Species}

-
-

 \author{
 \author{

-Bassam Al-Kindy,
-Jean-Fran\c{c}ois Couchot,  
-Christophe Guyeux,
-and Michel Salomon*\\
-FEMTO-ST Institute, UMR 6174 CNRS\\
-Computer Science Laboratory DISC,
-University of Franche-Comt\'{e},
-Besan\c con, France.\\
-$*:$ Authors in alphabetic order.\\
+Bassam AlKindy\footnote{email: bassam.al-kindy@univ-fcomt\'{e}.fr} \and Jean-Fran\c{c}ois Couchot 
+\and Christophe Guyeux \and Arnaud Mouly \and Michel Salomon \and\\
+FEMTO-ST Institute, UMR 6174 CNRS, \\
+Computer Science Department DISC, \\
+Universit\'{e} de Franche-Comt\'{e}, France \\
+{\small \it Authors in alphabetic order}

 }
 }

+

 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}
 \newcommand{\JFC}[1]{\begin{color}{green}\textit{}\end{color}}

-\newcommand{\CG}[1]{\begin{color}
-{blue}\textit{}\end{color}}
+\newcommand{\CG}[1]{\begin{color}{blue}\textit{}\end{color}}

 % make the title area
 \maketitle
 
 % make the title area
 \maketitle
 


@@ -43,25 +42,20 @@ $*:$ Authors in alphabetic order.\\
 \section{Introduction}\label{sec:intro}
 \input{intro.tex}
 
 \section{Introduction}\label{sec:intro}
 \input{intro.tex}
 

-
-\section{Similarity-based Approach}
-%input 
+\section{Similarity-based approach}

 % Main author : jfc
 \input{classEquiv}
 
 % Main author : jfc
 \input{classEquiv}
 

-
-
-\section{Annotated-based Approaches}
+\section{Annotation-based approaches}

 % Main author : bassam
 \input{annotated}
 
 % \section{Second Stage: to Find Closed Genomes}
 % \input{closedgenomes}
 % Main author : bassam
 \input{annotated}
 
 % \section{Second Stage: to Find Closed Genomes}
 % \input{closedgenomes}

-
-
+\section{Discussion}
+\input{discussion.tex}

 \section{Conclusion}\label{sec:concl}
 
 \section{Conclusion}\label{sec:concl}
 

-

 \bibliographystyle{plain}
 
 \bibliography{biblio}
 \bibliographystyle{plain}
 
 \bibliography{biblio}