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323 \usepackage{amsfonts}
324 \usepackage[utf8]{inputenc}
325 \usepackage[T1]{fontenc}
326 \usepackage[textsize=footnotesize]{todonotes}
327 \newcommand{\LZK}[2][inline]{%
328 \todo[color=red!10,#1]{\sffamily\textbf{LZK:} #2}\xspace}
329 \newcommand{\RC}[2][inline]{%
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347 \title{Two parallel implementations of Ehrlich-Aberth algorithm for root-finding of polynomials on multiple GPUs with OpenMP and MPI}
350 % author names and affiliations
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353 \author{\IEEEauthorblockN{Kahina Guidouche, Abderrahmane Sider }
354 \IEEEauthorblockA{Laboratoire LIMED\\
355 Faculté des sciences exactes\\
356 Université de Bejaia, 06000, Algeria\\
357 Email: \{kahina.ghidouche,ar.sider\}@univ-bejaia.dz}
359 \IEEEauthorblockN{Lilia Ziane Khodja, Raphaël Couturier}
360 \IEEEauthorblockA{FEMTO-ST Institute\\
361 University of Bourgogne Franche-Comte, France\\
362 Email: zianekhodja.lilia@gmail.com\\ raphael.couturier@univ-fcomte.fr}}
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378 %Georgia Institute of Technology,
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389 % use for special paper notices
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401 Finding roots of polynomials is a very important part of solving
402 real-life problems but it is not so easy for polynomials of high
403 degrees. In this paper, we present two different parallel algorithms
404 of the Ehrlich-Aberth method to find roots of sparse and fully defined
405 polynomials of high degrees. Both algorithms are based on CUDA
406 technology to be implemented on multi-GPU computing platforms but each
407 using different parallel paradigms: OpenMP or MPI. The experiments
408 show a quasi-linear speedup by using up-to 4 GPU devices compared to 1
409 GPU to find roots of polynomials of degree up-to 1.4
410 million. Moreover, other experiments show it is possible to find roots
411 of polynomials of degree up-to 5 millions.
415 \LZK{Faut pas mettre des keywords?}
420 % For peer review papers, you can put extra information on the cover
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426 % For peerreview papers, this IEEEtran command inserts a page break and
427 % creates the second title. It will be ignored for other modes.
428 \IEEEpeerreviewmaketitle
431 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
432 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
433 \section{Introduction}
434 %Polynomials are mathematical algebraic structures that play an important role in science and engineering by capturing physical phenomena and expressing any outcome as a function of some unknown variables. Formally speaking, a polynomial $p(x)$ of degree $n$ having $n$ coefficients in the complex plane $\mathbb{C}$ is:
436 %p(x)=\sum_{i=0}^{n}{a_ix^i}.
438 %\LZK{Dans ce cas le polynôme a $n+1$ coefficients et non pas $n$!}
440 %The issue of finding the roots of polynomials of very high degrees arises in many complex problems in various fields, such as algebra, biology, finance, physics or climatology [1]. In algebra for example, finding eigenvalues or eigenvectors of any real/complex matrix amounts to that of finding the roots of the so-called characteristic polynomial.
442 Finding roots of polynomials of very high degrees arises in many complex problems in various domains such as algebra, biology or physics. A polynomial $p(x)$ in $\mathbb{C}$ in one variable $x$ is an algebraic expression in $x$ of the form:
444 p(x) = \displaystyle\sum^n_{i=0}{a_ix^i},a_n\neq 0,
446 where $\{a_i\}_{0\leq i\leq n}$ are complex coefficients and $n$ is a high integer number. If $a_n\neq0$ then $n$ is called the degree of the polynomial. The root-finding problem consists in finding the $n$ different values of the unknown variable $x$ for which $p(x)=0$. Such values are called roots of $p(x)$. Let $\{z_i\}_{1\leq i\leq n}$ be the roots of polynomial $p(x)$, then $p(x)$ can be written as :
448 p(x)=a_n\displaystyle\prod_{i=1}^n(x-z_i), a_n\neq 0.
450 %\LZK{Pourquoi $a_0a_n\neq 0$ ?: $a_0$ pour la premiere equation et $a_n$ pour la deuxieme equation }
452 %The problem of finding the roots of polynomials can be encountered in numerous applications. \LZK{A mon avis on peut supprimer cette phrase}
453 Most of the numerical methods that deal with the polynomial root-finding problem are simultaneous methods, \textit{i.e.} the iterative methods to find simultaneous approximations of the $n$ polynomial roots. These methods start from the initial approximations of all $n$ polynomial roots and give a sequence of approximations that converge to the roots of the polynomial. Two examples of well-known simultaneous methods for root-finding problem of polynomials are Durand-Kerner method~\cite{Durand60,Kerner66} and Ehrlich-Aberth method~\cite{Ehrlich67,Aberth73}.
454 %\LZK{Pouvez-vous donner des références pour les deux méthodes?, c'est fait}
456 %The first method of this group is Durand-Kerner method:
459 % DK: z_i^{k+1}=z_{i}^{k}-\frac{P(z_i^{k})}{\prod_{i\neq j}(z_i^{k}-z_j^{k})}, i = 1, \ldots, n,
461 %where $z_i^k$ is the $i^{th}$ root of the polynomial $p$ at the iteration $k$. Another method discovered by Borsch-Supan~\cite{ Borch-Supan63} and also described by Ehrlich~\cite{Ehrlich67} and Aberth~\cite{Aberth73} uses a different iteration form as follows:
465 %EA: z_i^{k+1}=z_i^{k}-\frac{1}{{\frac {P'(z_i^{k})} {P(z_i^{k})}}-{\sum_{i\neq j}\frac{1}{(z_i^{k}-z_j^{k})}}}, i = 1, \ldots, n,
468 %where $p'(z)$ is the polynomial derivative of $p$ evaluated in the point $z$.
470 %Aberth, Ehrlich and Farmer-Loizou~\cite{Loizou83} have proved that
471 %the Ehrlich-Aberth method (EA) has a cubic order of convergence for simple roots whereas the Durand-Kerner has a quadratic order of %convergence.
473 The main problem of the simultaneous methods is that the necessary
474 time needed for the convergence increases with the increasing of the
475 polynomial's degree. Many authors have treated the problem of
476 implementing simultaneous methods in
477 parallel. Freeman~\cite{Freeman89} implemented and compared
478 Durand-Kerner method, Ehrlich-Aberth method and another method of the
479 fourth order of convergence proposed by Farmer and
480 Loizou~\cite{Loizou83} on a 8-processor linear chain, for polynomials
481 of degree up-to 8. The method of Farmer and Loizou~\cite{Loizou83}
482 often diverges, but the first two methods (Durand-Kerner and
483 Ehrlich-Aberth methods) have a speed-up equals to 5.5. Later, Freeman
484 and Bane~\cite{Freemanall90} considered asynchronous algorithms in
485 which each processor continues to update its approximations even
486 though the latest values of other approximations $z^{k}_{i}$ have not
487 been received from the other processors, in contrast with synchronous
488 algorithms where it would wait those values before making a new
489 iteration. Couturier et al.~\cite{Raphaelall01} proposed two methods
490 of parallelization for a shared memory architecture with OpenMP and
491 for a distributed memory one with MPI. They are able to compute the
492 roots of sparse polynomials of degree 10,000 in 116 seconds with
493 OpenMP and 135 seconds with MPI only by using 8 personal computers and
494 2 communications per iteration. The authors showed an interesting
495 speedup comparing to the sequential implementation which takes up-to
496 3,300 seconds to obtain same results.
497 \RC{si on donne des temps faut donner le proc, comme c'est vieux à mon avis faut supprimer ca, votre avis?}
498 \LZK{Supprimons ces détails et mettons une référence s'il y en a une}
500 Very few work had been performed since then until the appearing of the Compute Unified Device Architecture (CUDA)~\cite{CUDA15}, a parallel computing platform and a programming model invented by NVIDIA. The computing power of GPUs (Graphics Processing Units) has exceeded that of traditional processors CPUs. However, CUDA adopts a totally new computing architecture to use the hardware resources provided by the GPU in order to offer a stronger computing ability to the massive data computing. Ghidouche et al.~\cite{Kahinall14} proposed an implementation of the Durand-Kerner method on a single GPU. Their main results showed that a parallel CUDA implementation is about 10 times faster than the sequential implementation on a single CPU for sparse polynomials of degree 48,000.
502 %Finding polynomial roots rapidly and accurately is the main objective of our work. In this paper we propose the parallelization of Ehrlich-Aberth method using two parallel programming paradigms OpenMP and MPI on multi-GPU platforms. We consider two architectures: shared memory and distributed memory computers. The first parallel algorithm is implemented on shared memory computers by using OpenMP API. It is based on threads created from the same system process, such that each thread is attached to one GPU. In this case the communications between GPUs are done by OpenMP threads through shared memory. The second parallel algorithm uses the MPI API, such that each GPU is attached and managed by a MPI process. The GPUs exchange their data by message-passing communications. This latter approach is more used on distributed memory clusters to solve very complex problems that are too large for traditional supercomputers, which are very expensive to build and run.
503 %\LZK{Cette partie est réécrite. \\ Sinon qu'est ce qui a été fait pour l'accuracy dans ce papier (Finding polynomial roots rapidly and accurately is the main objective of our work.)?}
504 %\LZK{Les contributions ne sont pas définies !!}
506 %In this paper we propose the parallelization of Ehrlich-Aberth method using two parallel programming paradigms OpenMP and MPI on CUDA multi-GPU platforms. Our CUDA-MPI and CUDA-OpenMP codes are the first implementations of Ehrlich-Aberth method with multiple GPUs for finding roots of polynomials. Our major contributions include:
507 %\LZK{Pourquoi la méthode Ehrlich-Aberth et pas autres? the Ehrlich-Aberth have very good convergence and it is suitable to be implemented in parallel computers.}
508 In this paper we propose the parallelization of Ehrlich-Aberth method which has a good convergence and it is suitable to be implemented in parallel computers. We use two parallel programming paradigms OpenMP and MPI on CUDA multi-GPU platforms. Our CUDA-MPI and CUDA-OpenMP codes are the first implementations of Ehrlich-Aberth method with multiple GPUs for finding roots of polynomials. Our major contributions include:
509 \LZK{J'ai ajouté une phrase pour justifier notre choix de la méthode Ehrlich-Aberth. A revérifier.}
511 %\item An improvements for the Ehrlich-Aberth method using the exponential logarithm in order to be able to solve sparse and full polynomial of degree up to 1, 000, 000.\RC{j'ai envie de virer ca, car c'est pas la nouveauté dans ce papier}
512 %\item A parallel implementation of Ehrlich-Aberth method on single GPU with CUDA.\RC{idem}
513 \item The parallel implementation of Ehrlich-Aberth algorithm on a multi-GPU platform with a shared memory using OpenMP API. It is based on threads created from the same system process, such that each thread is attached to one GPU. In this case the communications between GPUs are done by OpenMP threads through shared memory.
514 \item The parallel implementation of Ehrlich-Aberth algorithm on a multi-GPU platform with a distributed memory using MPI API, such that each GPU is attached and managed by a MPI process. The GPUs exchange their data by message-passing communications.
516 This latter approach is more used on clusters to solve very complex problems that are too large for traditional supercomputers, which are very expensive to build and run.
517 \LZK{Pas d'autres contributions possibles? J'ai supprimé les deux premiers points proposés précédemment.}
519 %This paper is organized as follows. In Section~\ref{sec2} we recall the Ehrlich-Aberth method. In section~\ref{sec3} we present EA algorithm on single GPU. In section~\ref{sec4} we propose the EA algorithm implementation on Multi-GPU for (OpenMP-CUDA) approach and (MPI-CUDA) approach. In sectioné\ref{sec5} we present our experiments and discus it. Finally, Section~\ref{sec6} concludes this paper and gives some hints for future research directions in this topic.}
521 The paper is organized as follows. In Section~\ref{sec2} we present three different parallel programming models OpenMP, MPI and CUDA. In Section~\ref{sec3} we present the implementation of the Ehrlich-Aberth algorithm on a single GPU. In Section~\ref{sec4} we present the parallel implementations of the Ehrlich-Aberth algorithm on multiple GPUs using the OpenMP and MPI approaches. In section~\ref{sec5} we present our experiments and discuss them. Finally, Section~\ref{sec6} concludes this paper and gives some hints for future research directions in this topic.
522 %\LZK{A revoir toute cette organization: je viens de la revoir}
524 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
525 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
527 \section{Parallel programming models}
529 Our objective consists in implementing a root-finding algorithm of polynomials on multiple GPUs. To this end, it is primordial to know how to manage CUDA contexts of different GPUs. A direct method for controlling the various GPUs is to use as many threads or processes as GPU devices. We investigate two parallel paradigms: OpenMP and MPI. In this case, the GPU indices are defined according to the identifiers of the OpenMP threads or the ranks of the MPI processes. In this section we present the parallel programming models: OpenMP, MPI and CUDA.
532 %Open Multi-Processing (OpenMP) is a shared memory architecture API that provides multi thread capacity~\cite{openmp13}. OpenMP is a portable approach for parallel programming on shared memory systems based on compiler directives, that can be included in order to parallelize a loop. In this way, a set of loops can be distributed along the different threads that will access to different data allocated in local shared memory. One of the advantages of OpenMP is its global view of application memory address space that allows relatively fast development of parallel applications with easier maintenance. However, it is often difficult to get high rates of performance in large scale applications. Although usage of OpenMP threads and managed data explicitly done with MPI can be considered, this approcache undermines the advantages of OpenMP.
535 %OpenMP is a shared memory programming API based on threads from
536 %the same system process. Designed for multiprocessor shared memory UMA or
537 %NUMA [10], it relies on the execution model SPMD ( Single Program, Multiple Data Stream )
538 %where the thread "master" and threads "slaves" asynchronously execute their codes
539 %communicate / synchronize via shared memory [7]. It also helps to build
540 %the loop parallelism and is very suitable for an incremental code parallelization
541 %Sequential natively. Threads share some or all of the available memory and can
542 %have private memory areas [6].
544 OpenMP (Open Multi-processing) is an application programming interface for parallel programming~\cite{openmp13}. It is a portable approach based on the multithreading designed for shared memory computers, where a master thread forks a number of slave threads which execute blocks of code in parallel. An OpenMP program alternates sequential regions and parallel regions of code, where the sequential regions are executed by the master thread and the parallel ones may be executed by multiple threads. During the execution of an OpenMP program the threads communicate their data (read and modified) in the shared memory. One advantage of OpenMP is the global view of the memory address space of an application. This allows relatively a fast development of parallel applications with easier maintenance. However, it is often difficult to get high rates of performances in large scale-applications.
547 %The MPI (Message Passing Interface) library allows to create computer programs that run on a distributed memory architecture. The various processes have their own environment of execution and execute their code in a asynchronous way, according to the MIMD model (Multiple Instruction streams, Multiple Data streams); they communicate and synchronize by exchanging messages~\cite{Peter96}. MPI messages are explicitly sent, while the exchanges are implicit within the framework of a multi-thread programming environment like OpenMP or Pthreads.
549 MPI (Message Passing Interface) is a portable message passing style of the parallel programming designed especially for the distributed memory architectures~\cite{Peter96}. In most MPI implementations, a computation contains a fixed set of processes created at the initialization of the program in such way one process is created per processor. The processes synchronize their computations and communicate by sending/receiving messages to/from other processes. In this case, the data are explicitly exchanged by message passing while the data exchanges are implicit in a multithread programming model like OpenMP and Pthreads. However in the MPI programming model, the processes may either execute different programs referred to as multiple program multiple data (MPMD) or every process executes the same program (SPMD). The MPI approach is one of most used HPC programming model to solve large scale and complex applications.
552 %CUDA (is an acronym of the Compute Unified Device Architecture) is a parallel computing architecture developed by NVIDIA~\cite{CUDA10}.The unit of execution in CUDA is called a thread. Each thread executes a kernel by the streaming processors in parallel. In CUDA, a group of threads that are executed together is called a thread block, and the computational grid consists of a grid of thread blocks. Additionally, a thread block can use the shared memory on a single multiprocessor while the grid executes a single CUDA program logically in parallel. Thus in CUDA programming, it is necessary to design carefully the arrangement of the thread blocks in order to ensure low latency and a proper usage of shared memory, since it can be shared only in a thread block scope. The effective bandwidth of each memory space depends on the memory access pattern. Since the global memory has lower bandwidth than the shared memory, the global memory accesses should be minimized.
554 CUDA (Compute Unified Device Architecture) is a parallel computing architecture developed by NVIDIA~\cite{CUDA15} for GPUs. It provides a high level GPGPU-based programming model to program GPUs for general purpose computations and non-graphic applications. The GPU is viewed as an accelerator such that data-parallel operations of a CUDA program running on a CPU are off-loaded onto GPU and executed by this later. The data-parallel operations executed by GPUs are called kernels. The same kernel is executed in parallel by a large number of threads organized in grids of thread blocks, such that each GPU multiprocessor executes one or more thread blocks in SIMD fashion (Single Instruction, Multiple Data) and in turn each core of the multiprocessor executes one or more threads within a block. Threads within a block can cooperate by sharing data through a fast shared memory and coordinate their execution through synchronization points. In contrast, within a grid of thread blocks, there is no synchronization at all between blocks. The GPU only works on data filled in the global memory and the final results of the kernel executions must be transferred out of the GPU. In the GPU, the global memory has lower bandwidth than the shared memory associated to each multiprocessor. Thus in the CUDA programming, it is necessary to design carefully the arrangement of the thread blocks in order to ensure low latency and a proper usage of the shared memory, and the global memory accesses should be minimized.
556 %We introduced three paradigms of parallel programming. Our objective consists in implementing a root finding polynomial algorithm on multiple GPUs. To this end, it is primordial to know how to manage CUDA contexts of different GPUs. A direct method for controlling the various GPUs is to use as many threads or processes as GPU devices. We can choose the GPU index based on the identifier of OpenMP thread or the rank of the MPI process. Both approaches will be investigated.
558 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
559 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
561 \section{The Ehrlich-Aberth algorithm on a GPU}
564 \subsection{The Ehrlich-Aberth method}
565 %A cubically convergent iteration method to find zeros of
566 %polynomials was proposed by O. Aberth~\cite{Aberth73}. The
567 %Ehrlich-Aberth (EA is short) method contains 4 main steps, presented in what
570 %The Aberth method is a purely algebraic derivation.
571 %To illustrate the derivation, we let $w_{i}(z)$ be the product of linear factors
574 %w_{i}(z)=\prod_{j=1,j \neq i}^{n} (z-x_{j})
577 %And let a rational function $R_{i}(z)$ be the correction term of the
578 %Weistrass method~\cite{Weierstrass03}
581 %R_{i}(z)=\frac{p(z)}{w_{i}(z)} , i=1,2,...,n.
584 %Differentiating the rational function $R_{i}(z)$ and applying the
585 %Newton method, we have:
588 %\frac{R_{i}(z)}{R_{i}^{'}(z)}= \frac{p(z)}{p^{'}(z)-p(z)\frac{w_{i}(z)}{w_{i}^{'}(z)}}= \frac{p(z)}{p^{'}(z)-p(z) \sum _{j=1,j \neq i}^{n}\frac{1}{z-x_{j}}}, i=1,2,...,n
590 %where R_{i}^{'}(z)is the rational function derivative of F evaluated in the point z
591 %Substituting $x_{j}$ for $z_{j}$ we obtain the Aberth iteration method.%
594 %\subsubsection{Polynomials Initialization}
595 %The initialization of a polynomial $p(z)$ is done by setting each of the $n$ complex coefficients %$a_{i}$:
598 %\label{eq:SimplePolynome}
599 % p(z)=\sum{a_{i}z^{n-i}} , a_{n} \neq 0,a_{0}=1, a_{i}\subset C
603 %\subsubsection{Vector $Z^{(0)}$ Initialization}
604 %\label{sec:vec_initialization}
605 %As for any iterative method, we need to choose $n$ initial guess points $z^{0}_{i}, i = 1, . . . , %n.$
606 %The initial guess is very important since the number of steps needed by the iterative method to %reach
607 %a given approximation strongly depends on it.
608 %In~\cite{Aberth73} the Ehrlich-Aberth iteration is started by selecting $n$
609 %equi-distant points on a circle of center 0 and radius r, where r is
610 %an upper bound to the moduli of the zeros. Later, Bini and al.~\cite{Bini96}
611 %performed this choice by selecting complex numbers along different
612 %circles which relies on the result of~\cite{Ostrowski41}.
617 %\sigma_{0}=\frac{u+v}{2};u=\frac{\sum_{i=1}^{n}u_{i}}{n.max_{i=1}^{n}u_{i}};
618 %v=\frac{\sum_{i=0}^{n-1}v_{i}}{n.min_{i=0}^{n-1}v_{i}};\\
623 %u_{i}=2.|a_{i}|^{\frac{1}{i}};
624 %v_{i}=\frac{|\frac{a_{n}}{a_{i}}|^{\frac{1}{n-i}}}{2}.
627 %\subsubsection{Iterative Function}
628 %The operator used by the Aberth method corresponds to the
629 %equation~\ref{Eq:EA1}, it enables the convergence towards
630 %the polynomials zeros, provided all the roots are distinct.
632 %Here we give a second form of the iterative function used by the Ehrlich-Aberth method:
636 %EA: z^{k+1}_{i}=z_{i}^{k}-\frac{\frac{p(z_{i}^{k})}{p'(z_{i}^{k})}}
637 %{1-\frac{p(z_{i}^{k})}{p'(z_{i}^{k})}\sum_{j=1,j\neq i}^{j=n}{\frac{1}{(z_{i}^{k}-z_{j}^{k})}}}, %i=1,. . . .,n
640 %\subsubsection{Convergence Condition}
641 %The convergence condition determines the termination of the algorithm. It consists in stopping the %iterative function when the roots are sufficiently stable. We consider that the method converges %sufficiently when:
644 %\label{eq:AAberth-Conv-Cond}
645 %\forall i \in [1,n];\vert\frac{z_{i}^{k}-z_{i}^{k-1}}{z_{i}^{k}}\vert<\xi
649 %\begin{figure}[htbp]
651 % \includegraphics[angle=-90,width=0.5\textwidth]{EA-Algorithm}
652 %\caption{The Ehrlich-Aberth algorithm on single GPU}
656 %the Ehrlich-Aberth method is an iterative method, contain 4 steps, start from the initial approximations of all the roots of the polynomial,the second step initialize the solution vector $Z$ using the Guggenheimer method to assure the distinction of the initial vector roots, than in step 3 we apply the the iterative function based on the Newton's method and Weiestrass operator~\cite{,}, witch will make it possible to converge to the roots solution, provided that all the root are different.
658 The Ehrlich-Aberth method is a simultaneous method~\cite{Aberth73} using the following iteration
661 z^{k+1}_{i}=z_{i}^{k}-\frac{\frac{p(z_{i}^{k})}{p'(z_{i}^{k})}}
662 {1-\frac{p(z_{i}^{k})}{p'(z_{i}^{k})}\sum_{j=1,j\neq i}^{j=n}{\frac{1}{(z_{i}^{k}-z_{j}^{k})}}}, i=1,\ldots,n
665 This method contains 4 steps. The first step consists in the initializing the polynomial. The second step initializes the solution vector $Z$ using the Guggenheimer method~\cite{Gugg86} to ensure that initial roots are all distinct from each other. In step 3, the iterative function based on the Newton's method~\cite{newt70} and Weiestrass operator~\cite{Weierstrass03} is applied. In our case, the Ehrlich-Aberth is applied as in~(\ref{Eq:EA1}). Iterations of the Ehrlich-Aberth method will converge to the roots of the considered polynomial. In order to stop the iterative function, a stop condition is applied, this is the 4th step. This condition checks that all the root modules are lower than a fixed value $\epsilon$.
668 \label{eq:Aberth-Conv-Cond}
669 \forall i\in[1,n],~\vert\frac{z_i^k-z_i^{k-1}}{z_i^k}\vert<\epsilon
672 \subsection{Improving Ehrlich-Aberth method}
673 With high degree polynomials, the Ehrlich-Aberth method suffers from floating point overflows due to the mantissa of floating points representations. This induces errors in the computation of $p(z)$ when $z$ is large.
675 %Experimentally, it is very difficult to solve polynomials with the Ehrlich-Aberth method and have roots which except the circle of unit, represented by the radius $r$ evaluated as:
679 %R = exp(log(DBL\_MAX)/(2*n) );
684 % where \verb=DBL_MAX= stands for the maximum representable \verb=double= value.
686 In order to solve this problem, we propose to modify the iterative
687 function by using the logarithm and the exponential of a complex and
688 we propose a new version of the Ehrlich-Aberth method. This method
689 allows us to exceed the computation of the polynomials of degree
690 100,000 and to reach a degree up to more than 1,000,000. The reformulation of the iteration~(\ref{Eq:EA1}) of the Ehrlich-Aberth method with exponential and logarithm is defined as follows, for $i=1,\dots,n$:
694 z^{k+1}_i = z_i^k - \exp(\ln(p(z_i^k)) - \ln(p'(z^k_i)) - \ln(1-Q(z^k_i))),
701 Q(z^k_i) = \exp(\ln(p(z^k_i)) - \ln(p'(z^k_i)) + \ln(\sum_{i\neq j}^n\frac{1}{z^k_i-z^k_j})).
705 %We propose to use the logarithm and the exponential of a complex in order to compute the power at a high exponent.
706 Using the logarithm and the exponential operators, we can replace any multiplications and divisions with additions and subtractions. Consequently, computations manipulate lower values in absolute values~\cite{Karimall98}.
708 %This problem was discussed earlier in~\cite{Karimall98} for the Durand-Kerner method. The authors
709 %propose to use the logarithm and the exponential of a complex in order to compute the power at a high exponent. Using the logarithm and the exponential operators, we can replace any multiplications and divisions with additions and subtractions. Consequently, computations manipulate lower absolute values and the roots for large polynomial degrees can be looked for successfully~\cite{Karimall98}.
711 \subsection{The Ehrlich-Aberth parallel implementation on CUDA}
712 %We introduced three paradigms of parallel programming.
714 Our objective consists in implementing a root finding polynomial
715 algorithm on multiple GPUs. To this end, it is primordial to know how
716 to manage CUDA contexts of different GPUs. A direct method for
717 controlling the various GPUs is to use as many threads or processes as
718 GPU devices. We can choose the GPU index based on the identifier of
719 OpenMP thread or the rank of the MPI process. Both approaches will be
720 investigated. \LZK{Répétition! Le même texte est déjà écrit comme
721 intro dans la section II. Sinon ici on parle seulement de
722 l'implémentation cuda sans mpi et openmp! \RC{Je suis d'accord à
723 revoir après, quand les 2 parties suivantes seront plus stables}}
728 Like any parallel code, a GPU parallel implementation first requires to determine the sequential code and the data-parallel operations of a algorithm. In fact, all the operations that are easy to execute in parallel must be made by the GPU to accelerate the execution, like the steps 3 and 4. On the other hand, all the sequential operations and the operations that have data dependencies between CUDA threads or recursive computations must be executed by only one CUDA thread or a CPU thread (the steps 1 and 2).\LZK{La méthode est déjà mal présentée, dans ce cas c'est encore plus difficile de comprendre que représentent ces différentes étapes!} Initially, we specify the organization of parallel threads by specifying the dimension of the grid \verb+Dimgrid+, the number of blocks per grid \verb+DimBlock+ and the number of threads per block.
730 The code is organized as kernels which are parts of code that are run on GPU devices. For step 3, there are two kernels, the first is named \textit{save} is used to save vector $Z^{K-1}$ and the second one is
731 named \textit{update} and is used to update the $Z^{K}$ vector. For
732 step 4, a kernel tests the convergence of the method. In order to
733 compute the function H, we have two possibilities: either to use the
734 Jacobi mode, or the Gauss-Seidel mode of iterating which uses the most
735 recent computed roots. It is well known that the Gauss-Seidel mode
736 converges more quickly. So, we use Gauss-Seidel iterations. To
737 parallelize the code, we create kernels and many functions to be
738 executed on the GPU for all the operations dealing with the
739 computation on complex numbers and the evaluation of the
740 polynomials. As said previously, we manage both functions of
741 evaluation: the normal method, based on the method of
742 Horner and the method based on the logarithm of the polynomial. All
743 these methods were rather long to implement, as the development of
744 corresponding kernels with CUDA is longer than on a CPU host. This
745 comes in particular from the fact that it is very difficult to debug
746 CUDA running threads like threads on a CPU host. In the following
747 paragraph Algorithm~\ref{alg1-cuda} shows the GPU parallel
748 implementation of Ehrlich-Aberth method.
749 \LZK{Vaut mieux expliquer l'implémentation en faisant référence à l'algo séquentiel que de parler des différentes steps.}
751 %\begin{algorithm}[htpb]
755 %\caption{CUDA Algorithm to find polynomial roots with the Ehrlich-Aberth method}
756 %\KwIn{$Z^{0}$ (Initial vector of roots), $\epsilon$ (Error tolerance threshold), P (Polynomial to solve), Pu (Derivative of P), $n$ (Polynomial degree), $\Delta z_{max}$ (Maximum value of stop condition)}
757 %\KwOut{$Z$ (Solution vector of roots)}
761 %Initialization of P\;
762 %Initialization of Pu\;
763 %Initialization of the solution vector $Z^{0}$\;
764 %Allocate and copy initial data to the GPU global memory\;
765 %\While {$\Delta z_{max} > \epsilon$}{
766 % $ ZPres=kernel\_save(Z)$\;
767 % $ Z=kernel\_update(Z,P,Pu)$\;
768 % $\Delta z_{max}=kernel\_testConv(Z,ZPrec)$\;
771 %Copy results from GPU memory to CPU memory\;
774 \begin{algorithm}[htpb]
777 \caption{Finding roots of polynomials with the Ehrlich-Aberth method on a GPU}
778 \KwIn{$n$ (polynomial's degree), $\epsilon$ (tolerance threshold)}
779 \KwOut{$Z$ (solution vector of roots)}
780 Initialize the polynomial $P$ and its derivative $P'$\;
781 Set the initial values of vector $Z$\;
782 Copy $P$, $P'$ and $Z$ from CPU to GPU\;
783 \While{\emph{not convergence}}{
784 $Z^{prev}$ = KernelSave($Z,n$)\;
785 $Z$ = KernelUpdate($P,P',Z^{prev},n$)\;
786 $\Delta Z$ = KernelComputeError($Z,Z^{prev},n$)\;
787 $\Delta Z_{max}$ = CudaMaxFunction($\Delta Z,n$)\;
788 TestConvergence($\Delta Z_{max},\epsilon$)\;
790 Copy $Z$ from GPU to CPU\;
792 \RC{Si l'algo vous convient, il faudrait le détailler précisément\LZK{J'ai modifié l'algo. Sinon, est ce qu'on doit mettre en paramètre $Z^{prev}$ ou $Z$ tout court (dans le cas où on exploite l'asynchronisme des threads cuda!) pour le Kernel\_Update? }}
796 \section{The EA algorithm on Multiple GPUs}
798 \subsection{an OpenMP-CUDA approach}
799 Our OpenMP-CUDA implementation of EA algorithm is based on the hybrid
800 OpenMP and CUDA programming model. All the data are shared with
801 OpenMP amoung all the OpenMP threads. The shared data are the solution
802 vector $Z$, the polynomial to solve $P$, and the error vector $\Delta
803 z$. The number of OpenMP threads is equal to the number of GPUs, each
804 OpenMP thread binds to one GPU, and it controls a part of the shared
805 memory. More precisely each OpenMP thread will be responsible to
806 update its owns part of the vector Z. This part is call $Z_{loc}$ in
807 the following. Then all GPUs will have a grid of computation organized
808 according to the device performance and the size of data on which it
809 runs the computation kernels.
811 To compute one iteration of the EA method each GPU performs the
812 followings steps. First roots are shared with OpenMP and the
813 computation of the local size for each GPU is performed (lines 5-7 in
814 Algo\ref{alg2-cuda-openmp}). Each thread starts by copying all the
815 previous roots inside its GPU (line 9). Then each GPU will copy the
816 previous roots (line 10) and it will compute an iteration of the EA
817 method on its own roots (line 11). For that all the other roots are
818 used. The convergence is checked on the new roots (line 12). At the end
819 of an iteration, the updated roots are copied from the GPU to the
820 CPU (line 14) by direcly updating its own roots in the shared memory
821 arrays containing all the roots.
823 %In principle a grid is set by two parameter DimGrid, the number of block per grid, DimBloc: the number of threads per block. The following schema shows the architecture of (CUDA,OpenMP).
825 %\begin{figure}[htbp]
827 % \includegraphics[angle=-90,width=0.5\textwidth]{OpenMP-CUDA}
828 %\caption{The OpenMP-CUDA architecture}
831 %Each thread OpenMP compute the kernels on GPUs,than after each iteration they copy out the data from GPU memory to CPU shared memory. The kernels are re-runs is up to the roots converge sufficiently. Here are below the corresponding algorithm:
833 %% \RC{Surement à virer ou réécrire pour etre compris sans algo}
834 %% $num\_gpus$ OpenMP threads are created using
835 %% \verb=omp_set_num_threads();=function (step $3$, Algorithm
836 %% \ref{alg2-cuda-openmp}), the shared memory is created using
837 %% \verb=#pragma omp parallel shared()= OpenMP function (line $5$,
838 %% Algorithm\ref{alg2-cuda-openmp}), then each OpenMP thread allocates
839 %% memory and copies initial data from CPU memory to GPU global memory,
840 %% executes the kernels on GPU, but computes only his portion of roots
841 %% indicated with variable \textit{index} initialized in (line 5,
842 %% Algorithm \ref{alg2-cuda-openmp}), used as input data in the
843 %% $kernel\_update$ (line 10, Algorithm \ref{alg2-cuda-openmp}). After
844 %% each iteration, all OpenMP threads synchronize using
845 %% \verb=#pragma omp barrier;= to gather all the correct values of
846 %% $\Delta z$, thus allowing the computation the maximum stop condition
847 %% on vector $\Delta z$ (line 12, Algorithm
848 %% \ref{alg2-cuda-openmp}). Finally, threads copy the results from GPU
849 %% memories to CPU memory. The OpenMP threads execute kernels until the
850 %% roots sufficiently converge.
853 %% \begin{algorithm}[h]
854 %% \label{alg2-cuda-openmp}
857 %% \caption{CUDA-OpenMP Algorithm to find roots with the Ehrlich-Aberth method}
859 %% \KwIn{$Z^{0}$ (Initial root's vector), $\varepsilon$ (Error tolerance
860 %% threshold), P (Polynomial to solve), Pu (Derivative of P), $n$ (Polynomial degree), $\Delta z$ ( Vector of errors for stop condition), $num\_gpus$ (number of OpenMP threads/ Number of GPUs), $Size$ (number of roots)}
862 %% \KwOut {$Z$ ( Root's vector), $ZPrec$ (Previous root's vector)}
866 %% Initialization of P\;
867 %% Initialization of Pu\;
868 %% Initialization of the solution vector $Z^{0}$\;
869 %% Start of a parallel part with OpenMP (Z, $\Delta z$, P are shared variables)\;
870 %% gpu\_id=cudaGetDevice()\;
871 %% Allocate memory on GPU\;
872 %% Compute local size and offet according to gpu\_id\;
873 %% \While {$error > \epsilon$}{
874 %% copy Z from CPU to GPU\;
875 %% $ ZPrec_{loc}=kernel\_save(Z_{loc})$\;
876 %% $ Z_{loc}=kernel\_update(Z,P,Pu)$\;
877 %% $\Delta z[gpu\_id] = kernel\_testConv(Z_{loc},ZPrec_{loc})$\;
878 %% $ error= Max(\Delta z)$\;
879 %% copy $Z_{loc}$ from GPU to Z in CPU
883 \begin{algorithm}[htpb]
886 \caption{Finding roots of polynomials with the Ehrlich-Aberth method on multiple GPUs using OpenMP}
887 \KwIn{$n$ (polynomial's degree), $\epsilon$ (tolerance threshold), $ngpu$ (number of GPUs)}
888 \KwOut{$Z$ (solution vector of roots)}
889 Initialize the polynomial $P$ and its derivative $P'$\;
890 Set the initial values of vector $Z$\;
891 Start of a parallel part with OpenMP ($Z$, $\Delta Z$, $\Delta Z_{max}$, $P$ are shared variables)\;
892 $id_{gpu}$ = cudaGetDevice()\;
893 $n_{loc}$ = $n/ngpu$ (local size)\;
894 %$idx$ = $id_{gpu}\times n_{loc}$ (local offset)\;
895 Copy $P$, $P'$ from CPU to GPU\;
896 \While{\emph{not convergence}}{
897 Copy $Z$ from CPU to GPU\;
898 $Z^{prev}$ = KernelSave($Z,n$)\;
899 $Z_{loc}$ = KernelUpdate($P,P',Z^{prev},n_{loc}$)\;
900 $\Delta Z_{loc}$ = KernelComputeError($Z_{loc},Z^{prev}_{loc},n_{loc}$)\;
901 $\Delta Z_{max}[id_{gpu}]$ = CudaMaxFunction($\Delta Z_{loc},n_{loc}$)\;
902 Copy $Z_{loc}$ from GPU to $Z$ in CPU\;
903 $max$ = MaxFunction($\Delta Z_{max},ngpu$)\;
904 TestConvergence($max,\epsilon$)\;
906 \label{alg2-cuda-openmp}
907 \LZK{J'ai modifié l'algo. Le $P$ est mis shared. Qu'en est-il pour $P'$?}
914 \subsection{an MPI-CUDA approach}
915 %\begin{figure}[htbp]
917 % \includegraphics[angle=-90,width=0.2\textwidth]{MPI-CUDA}
918 %\caption{The MPI-CUDA architecture }
921 Our parallel implementation of EA to find root of polynomials using a CUDA-MPI approach is a data parallel approach. It splits input data of the polynomial to solve among MPI processes. In Algorithm \ref{alg2-cuda-mpi}, input data are the polynomial to solve $P$, the solution vector $Z$, the previous solution vector $ZPrev$, and the value of errors of stop condition $\Delta z$. Let $p$ denote the number of MPI processes on and $n$ the degree of the polynomial to be solved. The algorithm performs a simple data partitioning by creating $p$ portions, of at most $\lceil n/p \rceil$ roots to find per MPI process, for each $Z$ and $ZPrec$. Consequently, each MPI process of rank $k$ will have its own solution vector $Z_{k}$ and $ZPrec$, the error related to the stop condition $\Delta z_{k}$, enabling each MPI process to compute $\lceil n/p \rceil$ roots.
923 Since a GPU works only on data already allocated in its memory, all local input data, $Z_{k}$, $ZPrec$ and $\Delta z_{k}$, must be transferred from CPU memories to the corresponding GPU memories. Afterwards, the same EA algorithm (Algorithm \ref{alg1-cuda}) is run by all processes but on different polynomial subset of roots $ p(x)_{k}=\sum_{i=1}^{n} a_{i}x^{i}, k=1,...,p$. Each MPI process executes the loop \verb=(While(...)...do)= containing the CUDA kernels but each MPI process computes only its own portion of the roots according to the rule ``''owner computes``''. The local range of roots is indicated with the \textit{index} variable initialized at (line 5, Algorithm \ref{alg2-cuda-mpi}), and passed as an input variable to $kernel\_update$ (line 10, Algorithm \ref{alg2-cuda-mpi}). After each iteration, MPI processes synchronize (\verb=MPI_Allreduce= function) by a reduction on $\Delta z_{k}$ in order to compute the maximum error related to the stop condition. Finally, processes copy the values of new computed roots from GPU memories to CPU memories, then communicate their results to other processes with \verb=MPI_Alltoall= broadcast. If the stop condition is not verified ($error > \epsilon$) then processes stay withing the loop \verb= while(...)...do= until all the roots sufficiently converge.
925 \begin{algorithm}[htpb]
926 \label{alg2-cuda-mpi}
928 \caption{CUDA-MPI Algorithm to find roots with the Ehrlich-Aberth method}
930 \KwIn{$Z^{0}$ (Initial root's vector), $\varepsilon$ (Error tolerance
931 threshold), P (Polynomial to solve), Pu (Derivative of P), $n$ (Polynomial degrees), $\Delta z$ ( error of stop condition), $num_gpus$ (number of MPI processes/ number of GPUs), Size (number of roots)}
933 \KwOut {$Z$ (Solution root's vector), $ZPrec$ (Previous solution root's vector)}
936 Initialization of P\;
937 Initialization of Pu\;
938 Initialization of the solution vector $Z^{0}$\;
940 Allocate memory to GPU\;
941 \While {$error > \epsilon$}{
942 copy Z from CPU to GPU\;
943 $ZPrec_{loc}=kernel\_save(Z_{loc})$\;
944 $Z_{loc}=kernel\_update(Z,P,Pu)$\;
945 $\Delta z=kernel\_testConv(Z_{loc},ZPrec_{loc})$\;
946 $error=MPI\_Reduce(\Delta z)$\;
947 Copy $Z_{loc}$ from GPU to CPU\;
948 $Z=MPI\_AlltoAll(Z_{loc})$\;
953 \section{Experiments}
955 We study two categories of polynomials: sparse polynomials and full polynomials.\\
956 {\it A sparse polynomial} is a polynomial for which only some coefficients are not null. In this paper, we consider sparse polynomials for which the roots are distributed on 2 distinct circles:
958 \forall \alpha_{1} \alpha_{2} \in C,\forall n_{1},n_{2} \in N^{*}; P(z)= (z^{n_{1}}-\alpha_{1})(z^{n_{2}}-\alpha_{2})
959 \end{equation}\noindent
960 {\it A full polynomial} is, in contrast, a polynomial for which all the coefficients are not null. A full polynomial is defined by:
962 %%\forall \alpha_{i} \in C,\forall n_{i}\in N^{*}; P(z)= \sum^{n}_{i=1}(z^{n^{i}}.a_{i})
966 {\Large \forall a_{i} \in C, i\in N; p(x)=\sum^{n}_{i=0} a_{i}.x^{i}}
969 For our test, 4 cards GPU tesla Kepler K40 are used. In order to
970 evaluate both the GPU and Multi-GPU approaches, we performed a set of
971 experiments on a single GPU and multiple GPUs using OpenMP or MPI with
972 the EA algorithm, for both sparse and full polynomials of different
973 sizes. All experimental results obtained are perfomed with double
974 precision float data and the convergence threshold of the EA method is
975 set to $10^{-7}$. The initialization values of the vector solution of
976 the methods are given by Guggenheimer method~\cite{Gugg86}.
979 \subsection{Evaluation of the CUDA-OpenMP approach}
981 Here we report some experiments witt full and sparse polynomials of
982 different degrees with multiple GPUs.
983 \subsubsection{Execution times of the EA method to solve sparse polynomials on multiple GPUs}
985 In this experiments we report the execution time of the EA algorithm, on single GPU and multi-GPUs with (2,3,4) GPUs, for different sparse polynomial degrees ranging from 100,000 to 1,400,000.
989 \includegraphics[angle=-90,width=0.5\textwidth]{Sparse_omp}
990 \caption{Execution time in seconds of the Ehrlich-Aberth method to
991 solve sparse polynomials on multiple GPUs with CUDA-OpenMP.}
995 Figure~\ref{fig:01} shows that the CUDA-OpenMP approach scales well
996 with multiple GPUs. This version allows us to solve sparse polynomials
997 of very high degrees.
999 \subsubsection{Execution times of the EA method to solve full polynomials on multiple GPUs}
1001 These experiments show the execution times of the EA algorithm, on a single GPU and on multiple GPUs using the CUDA OpenMP approach for full polynomials of degrees ranging from 100,000 to 1,400,000.
1003 \begin{figure}[htbp]
1005 \includegraphics[angle=-90,width=0.5\textwidth]{Full_omp}
1006 \caption{Execution time in seconds of the Ehrlich-Aberth method to
1007 solve full polynomials on multiple GPUs with CUDA-OpenMP.}
1011 In Figure~\ref{fig:02}, we can observe that with full polynomials the EA version with
1012 CUDA-OpenMP scales also well. Using 4 GPUs allows us to achieve a
1013 quasi-linear speedup.
1015 \subsection{Evaluation of the CUDA-MPI approach}
1016 In this part we perform some experiments to evaluate the CUDA-MPI
1017 approach to solve full and sparse polynomials of degrees ranging from
1018 100,000 to 1,400,000.
1020 \subsubsection{Execution times of the EA method to solve sparse polynomials on multiple GPUs}
1022 \begin{figure}[htbp]
1024 \includegraphics[angle=-90,width=0.5\textwidth]{Sparse_mpi}
1025 \caption{Execution time in seconds of the Ehrlich-Aberth method to
1026 solve sparse polynomials on multiple GPUs with CUDA-MPI.}
1029 Figure~\ref{fig:03} shows the execution times of te EA algorithm,
1030 for a single GPU, and multiple GPUs (2, 3, 4) with the CUDA-MPI approach.
1032 \subsubsection{Execution time of the Ehrlich-Aberth method for solving full polynomials on multiple GPUs using the Multi-GPU appraoch}
1034 \begin{figure}[htbp]
1036 \includegraphics[angle=-90,width=0.5\textwidth]{Full_mpi}
1037 \caption{Execution times in seconds of the Ehrlich-Aberth method for
1038 full polynomials on multiple GPUs with CUDA-MPI.}
1042 In Figure~\ref{fig:04}, we can also observe that the CUDA-MPI approach
1043 is also efficient to solve full polynimails on multiple GPUs.
1045 \subsection{Comparison of the CUDA-OpenMP and the CUDA-MPI approaches}
1047 In the previuos section we saw that both approches are very effecient
1048 to reduce the execution times the sparse and full polynomials. In
1049 this section we try to compare these two approaches.
1051 \subsubsection{Solving sparse polynomials}
1052 In this experiment three sparse polynomials of size 200K, 800K and 1,4M are investigated.
1053 \begin{figure}[htbp]
1055 \includegraphics[angle=-90,width=0.5\textwidth]{Sparse}
1056 \caption{Execution times to solvs sparse polynomials of three
1057 distinct sizes on multiple GPUs using MPI and OpenMP with the
1058 Ehrlich-Aberth method}
1061 In Figure~\ref{fig:05} there is one curve for CUDA-MPI and another one
1062 for CUDA-OpenMP. We can see that the results are quite similar between
1063 OpenMP and MPI for the polynomials size of 200K. For the size of 800K,
1064 the MPI version is a little bit slower than the OpenMP approach but for
1065 the 1,4 millions size, there is a slight advantage for the MPI
1068 \subsubsection{Solving full polynomials}
1069 \begin{figure}[htbp]
1071 \includegraphics[angle=-90,width=0.5\textwidth]{Full}
1072 \caption{Execution time for solving full polynomials of three distinct sizes on multiple GPUs using MPI and OpenMP approaches using Ehrlich-Aberth}
1075 In Figure~\ref{fig:06}, we can see that when it comes to full polynomials, both approaches are almost equivalent.
1077 \subsubsection{Solving sparse and full polynomials of the same size with CUDA-MPI}
1079 In this experiment we compare the execution time of the EA algorithm
1080 according to the number of GPUs to solve sparse and full
1081 polynomials on multiples GPUs using MPI. We chose three sparse and full
1082 polynomials of size 200K, 800K and 1,4M.
1083 \begin{figure}[htbp]
1085 \includegraphics[angle=-90,width=0.5\textwidth]{MPI}
1086 \caption{Execution times to solve sparse and full polynomials of three distinct sizes on multiple GPUs using MPI.}
1089 In Figure~\ref{fig:07} we can see that CUDA-MPI can solve sparse and
1090 full polynomials of high degrees, the execution times with sparse
1091 polynomial are very low compared to full polynomials. With sparse
1092 polynomials the number of monomials is reduced, consequently the number
1093 of operations is reduced and the execution time decreases.
1095 \subsubsection{Solving sparse and full polynomials of the same size with CUDA-OpenMP}
1097 \begin{figure}[htbp]
1099 \includegraphics[angle=-90,width=0.5\textwidth]{OMP}
1100 \caption{Execution time for solving sparse and full polynomials of three distinct sizes on multiple GPUs using OpenMP}
1104 Figure ~\ref{fig:08} shows the impact of sparsity on the effectiveness of the CUDA-OpenMP approach. We can see that the impact follows the same pattern, a difference in execution time in favor of the sparse polynomials.
1106 \subsection{Scalability of the EA method on multiple GPUs to solve very high degree polynomials}
1107 These experiments report the execution times of the EA method for
1108 sparse and full polynomials ranging from 1,000,000 to 5,000,000.
1109 \begin{figure}[htbp]
1111 \includegraphics[angle=-90,width=0.5\textwidth]{big}
1112 \caption{Execution times in seconds of the Ehrlich-Aberth method for solving full polynomials of high degree on 4 GPUs for sizes ranging from 1M to 5M}
1115 In Figure~\ref{fig:09} we can see that both approaches are scalable
1116 and can solve very high degree polynomials. In addition, with full polynomial as well as sparse ones, both
1117 approaches give very similar results.
1119 %SIDER JE viens de virer \c ca For sparse polynomials here are a noticeable difference in favour of MPI when the degree is
1120 %above 4 millions. Between 1 and 3 millions, OpenMP is more effecient.
1121 %Under 1 million, OpenMPI and MPI are almost equivalent.
1123 %SIDER : il faut une explication sur les différences ici aussi.
1125 %for sparse and full polynomials
1126 % An example of a floating figure using the graphicx package.
1127 % Note that \label must occur AFTER (or within) \caption.
1128 % For figures, \caption should occur after the \includegraphics.
1129 % Note that IEEEtran v1.7 and later has special internal code that
1130 % is designed to preserve the operation of \label within \caption
1131 % even when the captionsoff option is in effect. However, because
1132 % of issues like this, it may be the safest practice to put all your
1133 % \label just after \caption rather than within \caption{}.
1135 % Reminder: the "draftcls" or "draftclsnofoot", not "draft", class
1136 % option should be used if it is desired that the figures are to be
1137 % displayed while in draft mode.
1141 %\includegraphics[width=2.5in]{myfigure}
1142 % where an .eps filename suffix will be assumed under latex,
1143 % and a .pdf suffix will be assumed for pdflatex; or what has been declared
1144 % via \DeclareGraphicsExtensions.
1145 %\caption{Simulation results for the network.}
1149 % Note that the IEEE typically puts floats only at the top, even when this
1150 % results in a large percentage of a column being occupied by floats.
1153 % An example of a double column floating figure using two subfigures.
1154 % (The subfig.sty package must be loaded for this to work.)
1155 % The subfigure \label commands are set within each subfloat command,
1156 % and the \label for the overall figure must come after \caption.
1157 % \hfil is used as a separator to get equal spacing.
1158 % Watch out that the combined width of all the subfigures on a
1159 % line do not exceed the text width or a line break will occur.
1161 %\begin{figure*}[!t]
1163 %\subfloat[Case I]{\includegraphics[width=2.5in]{box}%
1164 %\label{fig_first_case}}
1166 %\subfloat[Case II]{\includegraphics[width=2.5in]{box}%
1167 %\label{fig_second_case}}
1168 %\caption{Simulation results for the network.}
1172 % Note that often IEEE papers with subfigures do not employ subfigure
1173 % captions (using the optional argument to \subfloat[]), but instead will
1174 % reference/describe all of them (a), (b), etc., within the main caption.
1175 % Be aware that for subfig.sty to generate the (a), (b), etc., subfigure
1176 % labels, the optional argument to \subfloat must be present. If a
1177 % subcaption is not desired, just leave its contents blank,
1178 % e.g., \subfloat[].
1181 % An example of a floating table. Note that, for IEEE style tables, the
1182 % \caption command should come BEFORE the table and, given that table
1183 % captions serve much like titles, are usually capitalized except for words
1184 % such as a, an, and, as, at, but, by, for, in, nor, of, on, or, the, to
1185 % and up, which are usually not capitalized unless they are the first or
1186 % last word of the caption. Table text will default to \footnotesize as
1187 % the IEEE normally uses this smaller font for tables.
1188 % The \label must come after \caption as always.
1191 %% increase table row spacing, adjust to taste
1192 %\renewcommand{\arraystretch}{1.3}
1193 % if using array.sty, it might be a good idea to tweak the value of
1194 % \extrarowheight as needed to properly center the text within the cells
1195 %\caption{An Example of a Table}
1196 %\label{table_example}
1198 %% Some packages, such as MDW tools, offer better commands for making tables
1199 %% than the plain LaTeX2e tabular which is used here.
1200 %\begin{tabular}{|c||c|}
1210 % Note that the IEEE does not put floats in the very first column
1211 % - or typically anywhere on the first page for that matter. Also,
1212 % in-text middle ("here") positioning is typically not used, but it
1213 % is allowed and encouraged for Computer Society conferences (but
1214 % not Computer Society journals). Most IEEE journals/conferences use
1215 % top floats exclusively.
1216 % Note that, LaTeX2e, unlike IEEE journals/conferences, places
1217 % footnotes above bottom floats. This can be corrected via the
1218 % \fnbelowfloat command of the stfloats package.
1223 \section{Conclusion}
1225 In this paper, we have presented a parallel implementation of
1226 Ehrlich-Aberth algorithm to solve full and sparse polynomials, on
1227 single GPU with CUDA and on multiple GPUs using two parallel
1228 paradigms: shared memory with OpenMP and distributed memory with
1229 MPI. These architectures were addressed by a CUDA-OpenMP approach and
1230 CUDA-MPI approach, respectively. Experiments show that, using
1231 parallel programming model like (OpenMP, MPI). We can efficiently
1232 manage multiple graphics cards to solve the same
1233 problem and accelerate the parallel execution with 4 GPUs and solve a
1234 polynomial of degree up to 5,000,000, four times faster than on single
1238 %In future, we will evaluate our parallel implementation of Ehrlich-Aberth algorithm on other parallel programming model
1240 Our next objective is to extend the model presented here with clusters
1241 of GPU nodes, with a three-level scheme: inter-node communication via
1242 MPI processes (distributed memory), management of multi-GPU node by
1243 OpenMP threads (shared memory).
1245 %present a communication approach between multiple GPUs. The comparison between MPI and OpenMP as GPUs controllers shows that these
1246 %solutions can effectively manage multiple graphics cards to work together
1247 %to solve the same problem
1250 %than we have presented two communication approach between multiple GPUs.(CUDA-OpenMP) approach and (CUDA-MPI) approach, in the objective to manage multiple graphics cards to work together and solve the same problem. in the objective to manage multiple graphics cards to work together and solve the same problem.
1255 % conference papers do not normally have an appendix
1258 % use section* for acknowledgment
1259 \section*{Acknowledgment}
1261 Computations have been performed on the supercomputer facilities of
1262 the Mésocentre de calcul de Franche-Comté. We also would like to thank
1263 Nvidia for hardware donation under CUDA Research Center 2014.
1270 % trigger a \newpage just before the given reference
1271 % number - used to balance the columns on the last page
1272 % adjust value as needed - may need to be readjusted if
1273 % the document is modified later
1274 %\IEEEtriggeratref{8}
1275 % The "triggered" command can be changed if desired:
1276 %\IEEEtriggercmd{\enlargethispage{-5in}}
1278 % references section
1280 % can use a bibliography generated by BibTeX as a .bbl file
1281 % BibTeX documentation can be easily obtained at:
1282 % http://mirror.ctan.org/biblio/bibtex/contrib/doc/
1283 % The IEEEtran BibTeX style support page is at:
1284 % http://www.michaelshell.org/tex/ieeetran/bibtex/
1285 %\bibliographystyle{IEEEtran}
1286 % argument is your BibTeX string definitions and bibliography database(s)
1287 %\bibliography{IEEEabrv,../bib/paper}
1288 %\bibliographystyle{./IEEEtran}
1289 \bibliography{mybibfile}
1292 % <OR> manually copy in the resultant .bbl file
1293 % set second argument of \begin to the number of references
1294 % (used to reserve space for the reference number labels box)
1295 %\begin{thebibliography}{1}
1297 %\bibitem{IEEEhowto:kopka}
1298 %H.~Kopka and P.~W. Daly, \emph{A Guide to \LaTeX}, 3rd~ed.\hskip 1em plus
1299 % 0.5em minus 0.4em\relax Harlow, England: Addison-Wesley, 1999.
1301 %\bibitem{IEEEhowto:NVIDIA12}
1302 %NVIDIA Corporation, \textit{Whitepaper NVIDA’s Next Generation CUDATM Compute
1303 %Architecture: KeplerTM }, 1st ed., 2012.
1305 %\end{thebibliography}