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[prng_gpu.git] / mabase.bib

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@INPROCEEDINGS{AdelsbachKS06,
  author = {Andr{\'e} Adelsbach and Stefan Katzenbeisser and Ahmad-Reza Sadeghi},
  title = {A Computational Model for Watermark Robustness},
  booktitle = {Information Hiding},
  year = {2006},
  pages = {145-160},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/2006},
  ee = {http://dx.doi.org/10.1007/978-3-540-74124-4_10},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{BattiatoCGG99,
  author = {Sebastiano Battiato and Dario Catalano and Giovanni Gallo and Rosario
        Gennaro},
  title = {Robust Watermarking for Images Based on Color Manipulation},
  booktitle = {Information Hiding},
  year = {1999},
  pages = {302-317},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/1999},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{ComesanaPP05,
  author = {Pedro Comesa{\~n}a and Luis P{\'e}rez-Freire and Fernando P{\'e}rez-Gonz{\'a}lez},
  title = {The Return of the Sensitivity Attack},
  booktitle = {IWDW},
  year = {2005},
  pages = {260-274},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/iwdw/2005},
  ee = {http://dx.doi.org/10.1007/11551492_20},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{ComesanaPP05bis,
  author = {Pedro Comesa{\~n}a and Luis P{\'e}rez-Freire and Fernando P{\'e}rez-Gonz{\'a}lez},
  title = {Fundamentals of Data Hiding Security and Their Application to Spread-Spectrum
        Analysis},
  booktitle = {IH'05: Information Hiding Workshop},
  year = {2005},
  pages = {146-160},
  publisher = {Lectures Notes in Computer Science, Springer-Verlag},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/2005},
  ee = {http://dx.doi.org/10.1007/11558859_12},
  owner = {guyeux},
  timestamp = {2009.06.30}
}

@INPROCEEDINGS{CongJQZ06,
  author = {Jin Cong and Yan Jiang and Zhiguo Qu and Zhongmei Zhang},
  title = {A Wavelet Packets Watermarking Algorithm Based on Chaos Encryption},
  booktitle = {ICCSA (1)},
  year = {2006},
  pages = {921-928},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/iccsa/2006-1},
  ee = {http://dx.doi.org/10.1007/11751540_100}
}

@INPROCEEDINGS{DBLP:conf/focs/DziembowskiP08,
  author = {Stefan Dziembowski and Krzysztof Pietrzak},
  title = {Leakage-Resilient Cryptography},
  booktitle = {FOCS},
  year = {2008},
  pages = {293-302},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/focs/2008},
  ee = {http://dx.doi.org/10.1109/FOCS.2008.56}
}

@INCOLLECTION{Filiol10,
  author = {Eric Filiol},
  title = {Viruses and Malware},
  booktitle = {Handbook of Information and Communication Security},
  year = {2010},
  pages = {747-769},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:reference/icsec/2010},
  ee = {http://dx.doi.org/10.1007/978-3-642-04117-4_34}
}

@INPROCEEDINGS{Filiol00,
  author = {Eric Filiol},
  title = {Decimation Attack of Stream Ciphers},
  booktitle = {INDOCRYPT},
  year = {2000},
  pages = {31-42},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/indocrypt/2000},
  ee = {http://link.springer.de/link/service/series/0558/bibs/1977/19770031.htm}
}

@INPROCEEDINGS{Furon05,
  author = {Teddy Furon},
  title = {A Survey of Watermarking Security},
  booktitle = {IWDW},
  year = {2005},
  pages = {201-215},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/iwdw/2005},
  ee = {http://dx.doi.org/10.1007/11551492_16},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{DBLP:conf/cec/HiggsSHS10,
  author = {Trent Higgs and Bela Stantic and Tamjidul Hoque and Abdul Sattar},
  title = {Genetic algorithm feature-based resampling for protein structure
        prediction},
  booktitle = {IEEE Congress on Evolutionary Computation},
  year = {2010},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cec/2010},
  ee = {http://dx.doi.org/10.1109/CEC.2010.5586149}
}

@INPROCEEDINGS{Higgs2010,
  author = {Trent Higgs and Bela Stantic and Tamjidul Hoque and Abdul Sattar},
  title = {Genetic algorithm feature-based resampling for protein structure
        prediction},
  booktitle = {IEEE Congress on Evolutionary Computation},
  year = {2010},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cec/2010},
  ee = {http://dx.doi.org/10.1109/CEC.2010.5586149}
}

@INPROCEEDINGS{DBLP:conf/cec/HorvathC10,
  author = {Dragos Horvath and Camelia Chira},
  title = {Simplified chain folding models as metaheuristic benchmark for tuning
        real protein folding algorithms?},
  booktitle = {IEEE Congress on Evolutionary Computation},
  year = {2010},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cec/2010},
  ee = {http://dx.doi.org/10.1109/CEC.2010.5585932}
}

@INPROCEEDINGS{DBLP:conf/cec/IslamC10,
  author = {Md. Kamrul Islam and Madhu Chetty},
  title = {Clustered memetic algorithm for protein structure prediction},
  booktitle = {IEEE Congress on Evolutionary Computation},
  year = {2010},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cec/2010},
  ee = {http://dx.doi.org/10.1109/CEC.2010.5586187}
}

@INPROCEEDINGS{Ker06,
  author = {Andrew D. Ker},
  title = {Batch Steganography and Pooled Steganalysis},
  booktitle = {Information Hiding},
  year = {2006},
  pages = {265-281},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/2006},
  ee = {http://dx.doi.org/10.1007/978-3-540-74124-4_18},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{Lin2009,
  author = {H.-Y. Lin and T.-C. Chiang},
  title = {Cooperative Secure Data Aggregation in Sensor Networks Using Elliptic
        Curve Based Cryptosystems},
  booktitle = {CDVE},
  year = {2009},
  pages = {384-387},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cdve/2009},
  ee = {http://dx.doi.org/10.1007/978-3-642-04265-2_58}
}

@INPROCEEDINGS{DBLP:conf/cse/MaimourPH09,
  author = {Moufida Maimour and CongDuc Pham and Doan B. Hoang},
  title = {A Congestion Control Framework for Handling Video Surveillance Traffics
        on WSN},
  booktitle = {CSE (2)},
  year = {2009},
  pages = {943-948},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cse/2009},
  ee = {http://dx.doi.org/10.1109/CSE.2009.200}
}

@INPROCEEDINGS{DBLP:conf/icumt/MakhoulSP09,
  author = {Abdallah Makhoul and Rachid Saadi and CongDuc Pham},
  title = {Coverage and adaptive scheduling algorithms for criticality management
        on video wireless sensor networks},
  booktitle = {ICUMT},
  year = {2009},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/icumt/2009},
  ee = {http://dx.doi.org/10.1109/ICUMT.2009.5345630}
}

@INPROCEEDINGS{Mittelholzer99,
  author = {Thomas Mittelholzer},
  title = {An Information-Theoretic Approach to Steganography and Watermarking},
  booktitle = {Information Hiding},
  year = {1999},
  pages = {1-16},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/1999},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{PellegriniBA10,
  author = {Andrea Pellegrini and Valeria Bertacco and Todd M. Austin},
  title = {Fault-based attack of RSA authentication},
  booktitle = {DATE},
  year = {2010},
  pages = {855-860},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/date/2010},
  ee = {http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=5456933}
}

@INPROCEEDINGS{DBLP:conf/cec/Perez-HernandezRG10,
  author = {Luis Germ{\'a}n P{\'e}rez-Hern{\'a}ndez and Katya Rodr\'{\i}guez-V{\'a}zquez
        and Ram{\'o}n Gardu{\~n}o-Ju{\'a}rez},
  title = {Estimation of 3D Protein Structure by means of parallel Particle
        Swarm Optimization},
  booktitle = {IEEE Congress on Evolutionary Computation},
  year = {2010},
  pages = {1-8},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/cec/2010},
  ee = {http://dx.doi.org/10.1109/CEC.2010.5586549}
}

@INPROCEEDINGS{WangNHZH07,
  author = {Chuntao Wang and Jiangqun Ni and Jiwu Huang and Rongyue Zhang and
        Meiying Huang},
  title = {Robust and High Capacity Image Watermarking Based on Jointly Coding
        and Embedding Optimization},
  booktitle = {Information Hiding},
  year = {2007},
  pages = {65-79},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/ih/2007},
  ee = {http://dx.doi.org/10.1007/978-3-540-77370-2_5},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@INPROCEEDINGS{Zhao04,
  author = {Jian Zhao and Mingquan Zhou and Hongmei Xie and Jinye Peng and Xin
        Zhou},
  title = {A Novel Wavelet Image Watermarking Scheme Combined with Chaos Sequence
        and Neural Network},
  booktitle = {ISNN (2)},
  year = {2004},
  pages = {663-668},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  crossref = {DBLP:conf/isnn/2004-2},
  ee = {http://springerlink.metapress.com/openurl.asp?genre=article{\&}issn=0302-9743{\&}volume=3174{\&}spage=663}
}

@INPROCEEDINGS{Acharya05securecomparison,
  author = {Acharya, Mithun and Girao, Joao and Westhoff, Dirk},
  title = {Secure Comparison of Encrypted Data in Wireless Sensor Networks},
  booktitle = {WIOPT '05: Proceedings of the Third International Symposium on Modeling
        and Optimization in Mobile, Ad Hoc, and Wireless Networks},
  year = {2005},
  pages = {47--53},
  address = {Washington, DC, USA},
  publisher = {IEEE Computer Society},
  doi = {http://dx.doi.org/10.1109/WIOPT.2005.44},
  isbn = {0-7695-2267-X}
}

@INPROCEEDINGS{Acimez07onthe,
  author = {Onur Acıi\c{c}mez and \c{C}etin Kaya Ko\c{c} and Jean-Pierre Seifert},
  title = {On the power of simple branch prediction analysis },
  booktitle = {2007 ACM Symposium on Information, Computer and Communications Security
        (ASIACCS'07)},
  year = {2007},
  pages = {312--320},
  publisher = {ACM Press}
}

@ARTICLE{Adler65,
  author = {R. L. Adler and A. G. Konheim and M. H. McAndrew},
  title = {Topological entropy},
  journal = {Trans. Amer. Math. Soc.},
  year = {1965},
  volume = {114},
  pages = {309-319},
  owner = {guyeux},
  timestamp = {2008.05.29}
}

@INPROCEEDINGS{Agrawal04,
  author = {Agrawal, Rakesh and Kiernan, Jerry and Srikant, Ramakrishnan and
        Xu, Yirong},
  title = {Order preserving encryption for numeric data},
  booktitle = {SIGMOD '04: Proceedings of the 2004 ACM SIGMOD international conference
        on Management of data},
  year = {2004},
  pages = {563--574},
  address = {New York, NY, USA},
  publisher = {ACM},
  doi = {http://doi.acm.org/10.1145/1007568.1007632},
  isbn = {1-58113-859-8},
  location = {Paris, France}
}

@ARTICLE{Anfinsen20071973,
  author = {Anfinsen, Christian B.},
  title = {Principles that Govern the Folding of Protein Chains},
  journal = {Science},
  year = {1973},
  volume = {181},
  pages = {223-230},
  number = {4096},
  doi = {10.1126/science.181.4096.223},
  eprint = {http://www.sciencemag.org/content/181/4096/223.full.pdf},
  url = {http://www.sciencemag.org/content/181/4096/223.short}
}

@ARTICLE{Arques1994,
  author = {D. G. Arques and C. J. Michel},
  title = {Analytical expression of the purine/pyrimidine autocorrelation function
        after and before random mutations.},
  journal = {Math Biosci},
  year = {1994},
  volume = {123},
  pages = {103--125},
  number = {1},
  month = {Sep},
  abstract = {The mutation process is a classical evolutionary genetic process.
        The type of mutations studied here is the random substitutions of
        a purine base R (adenine or guanine) by a pyrimidine base Y (cytosine
        or thymine) and reciprocally (transversions). The analytical expressions
        derived allow us to analyze in genes the occurrence probabilities
        of motifs and d-motifs (two motifs separated by any d bases) on the
        R/Y alphabet under transversions. These motif probabilities can be
        obtained after transversions (in the evolutionary sense; from the
        past to the present) and, unexpectedly, also before transversions
        (after back transversions, in the inverse evolutionary sense, from
        the present to the past). This theoretical part in Section 2 is a
        first generalization of a particular formula recently derived. The
        application in Section 3 is based on the analytical expression giving
        the autocorrelation function (the d-motif probabilities) before transversions.
        It allows us to study primitive genes from actual genes. This approach
        solves a biological problem. The protein coding genes of chloroplasts
        and mitochondria have a preferential occurrence of the 6-motif YRY(N)6YRY
        (maximum of the autocorrelation function for d = 6, N = R or Y) with
        a periodicity modulo 3. The YRY(N)6YRY preferential occurrence without
        the periodicity modulo 3 is also observed in the RNA coding genes
        (ribosomal, transfer, and small nuclear RNA genes) and in the noncoding
        genes (introns and 5' regions of eukaryotic nuclei). However, there
        are two exceptions to this YRY(N)6YRY rule: the protein coding genes
        of eukaryotic nuclei, and prokaryotes, where YRY(N)6YRY has the second
        highest value after YRY(N)0YRY (YRYYRY) with a periodicity modulo
        3. When we go backward in time with the analytical expression, the
        protein coding genes of both eukaryotic nuclei and prokaryotes retrieve
        the YRY(N)6YRY preferential occurrence with a periodicity modulo
        3 after 0.2 back transversions per base. In other words, the actual
        protein coding genes of chloroplasts and mitochondria are similar
        to the primitive protein coding genes of eukaryotic nuclei and prokaryotes.
        On the other hand, this application represents the first result concerning
        the mutation process in the model of DNA sequence evolution we recently
        proposed. According to this model, the actual genes on the R/Y alphabet
        derive from two successive evolutionary genetic processes: an independent
        mixing of a few nonrandom types of oligonucleotides leading to genes
        called primitive followed by a mutation process in these primitive
        genes.(ABSTRACT TRUNCATED AT 400 WORDS)},
  institution = {Université de Franche-Comté, Laboratoire d'Informatique de Besançon,
        France.},
  keywords = {Base Sequence; Biological Evolution; DNA, genetics; Mathematics; Models,
        Genetic; Mutation; Probability; Proteins, genetics; Purines; Pyrimidines},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {0025-5564(94)90020-5},
  pmid = {7949744},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1998,
  author = {D. G. Arquès and J. P. Fallot and C. J. Michel},
  title = {An evolutionary analytical model of a complementary circular code
        simulating the protein coding genes, the 5' and 3' regions.},
  journal = {Bull Math Biol},
  year = {1998},
  volume = {60},
  pages = {163--194},
  number = {1},
  month = {Jan},
  abstract = {The self-complementary subset T0 = X0 [symbol: see text] ¿AAA, TTT¿
        with X0 = ¿AAC, AAT, ACC, ATC, ATT, CAG, CTC, CTG, GAA, GAC, GAG,
        GAT, GCC, GGC, GGT, GTA, GTC, GTT, TAC, TTC¿ of 22 trinucleotides
        has a preferential occurrence in the frame 0 (reading frame established
        by the ATG start trinucleotide) of protein (coding) genes of both
        prokaryotes and eukaryotes. The subsets T1 = X1 [symbol: see text]
        ¿CCC¿ and T2 = X2 [symbol: see text] ¿GGG¿ of 21 trinucleotides have
        a preferential occurrence in the shifted frames 1 and 2 respectively
        (frame 0 shifted by one and two nucleotides respectively in the 5'-3'
        direction). T1 and T2 are complementary to each other. The subset
        T0 contains the subset X0 which has the rarity property (6 x 10(-8)
        to be a complementary maximal circular code with two permutated maximal
        circular codes X1 and X2 in the frames 1 and 2 respectively. X0 is
        called a C3 code. A quantitative study of these three subsets T0,
        T1, T2 in the three frames 0, 1, 2 of protein genes, and the 5' and
        3' regions of eukaryotes, shows that their occurrence frequencies
        are constant functions of the trinucleotide positions in the sequences.
        The frequencies of T0, T1, T2 in the frame 0 of protein genes are
        49, 28.5 and 22.5\% respectively. In contrast, the frequencies of
        T0, T1, T2 in the 5' and 3' regions of eukaryotes, are independent
        of the frame. Indeed, the frequency of T0 in the three frames of
        5' (respectively 3') regions is equal to 35.5\% (respectively 38\%)
        and is greater than the frequencies T1 and T2, both equal to 32.25\%
        (respectively 31\%) in the three frames. Several frequency asymmetries
        unexpectedly observed (e.g. the frequency difference between T1 and
        T2 in the frame 0), are related to a new property of the subset T0
        involving substitutions. An evolutionary analytical model at three
        parameters (p, q, t) based on an independent mixing of the 22 codons
        (trinucleotides in frame 0) of T0 with equiprobability (1/22) followed
        by t approximately 4 substitutions per codon according to the proportions
        p approximately 0.1, q approximately 0.1 and r = 1 - p - q approximately
        0.8 in the three codon sites respectively, retrieves the frequencies
        of T0, T1, T2 observed in the three frames of protein genes and explains
        these asymmetries. Furthermore, the same model (0.1, 0.1, t) after
        t approximately 22 substitutions per codon, retrieves the statistical
        properties observed in the three frames of the 5' and 3' regions.
        The complex behaviour of these analytical curves is totally unexpected
        and a priori difficult to imagine.},
  doi = {10.1006/bulm.1997.0033},
  institution = {Equipe de Biologie Théorique, Université de Marne la Vallée, Institut
        Gaspard Monge, Noisy Le Grand, France. arques@univ-mlv.fr},
  keywords = {Animals; Biological Evolution; Codon, genetics; Genetic Code; Humans;
        Mammals; Models, Genetic; Probability; Proteins, genetics; Rodentia;
        Vertebrates},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S0092-8240(97)90033-1},
  pmid = {9530018},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1006/bulm.1997.0033}
}

@ARTICLE{Arques1993,
  author = {D. G. Arquès and C. J. Michel},
  title = {Analytical expression of the purine/pyrimidine codon probability
        after and before random mutations.},
  journal = {Bull Math Biol},
  year = {1993},
  volume = {55},
  pages = {1025--1038},
  number = {6},
  month = {Nov},
  abstract = {Recently, we proposed a new model of DNA sequence evolution (Arquès
        and Michel. 1990b. Bull. math. Biol. 52, 741-772) according to which
        actual genes on the purine/pyrimidine (R/Y) alphabet (R = purine
        = adenine or guanine, Y = pyrimidine = cytosine or thymine) are the
        result of two successive evolutionary genetic processes: (i) a mixing
        (independent) process of non-random oligonucleotides (words of base
        length less than 10: YRY(N)6, YRYRYR and YRYYRY are so far identified;
        N = R or Y) leading to primitive genes (words of several hundreds
        of base length) and followed by (ii) a random mutation process, i.e.,
        transformations of a base R (respectively Y) into the base Y (respectively
        R) at random sites in these primitive genes. Following this model
        the problem investigated here is the study of the variation of the
        8 R/Y codon probabilities RRR, ..., YYY under random mutations. Two
        analytical expressions solved here allow analysis of this variation
        in the classical evolutionary sense (from the past to the present,
        i.e., after random mutations), but also in the inverted evolutionary
        sense (from the present to the past, i.e., before random mutations).
        Different properties are also derived from these formulae. Finally,
        a few applications of these formulae are presented. They prove the
        proposition in Arquès and Michel (1990b. Bull. math. Biol. 52, 741-772),
        Section 3.3.2, with the existence of a maximal mean number of random
        mutations per base of the order 0.3 in the protein coding genes.
        They also confirm the mixing process of oligonucleotides by excluding
        the purine/pyrimidine contiguous and alternating tracts from the
        formation process of primitive genes.},
  institution = {Université de Franche-Comté, Besançon, France.},
  keywords = {Base Sequence; Codon; DNA, chemistry/genetics; Mathematics; Models,
        Genetic; Mutation; Probability; Purines; Pyrimidines},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {8281128},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1993b,
  author = {D. G. Arquès and C. J. Michel},
  title = {Identification and simulation of new non-random statistical properties
        common to different eukaryotic gene subpopulations.},
  journal = {Biochimie},
  year = {1993},
  volume = {75},
  pages = {399--407},
  number = {5},
  abstract = {The nucleotide distribution in protein coding genes, introns and transfer
        RNA genes of eukaryotic subpopulations (primates, rodent and mammals)
        is studied by autocorrelation functions. The autocorrelation function
        analysing the occurrence probability of the i-motif YRY(N)iYRY (YRY-function)
        in protein coding genes and transfer RNA genes of these three eukaryotic
        subpopulations retrieves the preferential occurrence of YRY(N)6YRY
        (R = purine = adenine or guanine, Y = pyrimidine = cytosine or thymine,
        N = R or Y). The autocorrelation functions analysing the occurrence
        probability of the i-motifs RRR(N)iRRR (RRR-function) and YYY(N)iYYY
        (YYY-function) identify new non-random genetic statistical properties
        in these three eukaryotic subpopulations, mainly: i) in their protein
        coding genes: local maxima for i identical to 6 [12] (peaks for i
        = 6, 18, 30, 42) with the RRR-function and local maxima for i identical
        to 8 [10] (peaks for i = 8, 18, 28) with the YYY-function; and ii)
        in their introns: local maxima for i identical to 3 [6] (peaks for
        i = 3, 9, 15) and a short linear decrease followed by a large exponential
        decrease both with the RRR- and YYY-functions. The non-random properties
        identified in eukaryotic intron subpopulations are modelised with
        a process of random insertions and deletions of nucleotides simulating
        the RNA editing.},
  institution = {Equipe de Biologie Théorique, Université de Franche-Comté, Laboratoire
        d'Informatique de Besançon, France.},
  keywords = {Animals; Base Sequence; Data Interpretation, Statistical; Genes; Introns;
        Mammals; Models, Genetic; Primates; Probability; Proteins, genetics;
        RNA Editing; RNA, Transfer, genetics; Rodentia; Sequence Analysis,
        DNA},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {0300-9084(93)90173-P},
  pmid = {8347726},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1992,
  author = {D. G. Arquès and C. J. Michel},
  title = {A simulation of the genetic periodicities modulo 2 and 3 with processes
        of nucleotide insertions and deletions.},
  journal = {J Theor Biol},
  year = {1992},
  volume = {156},
  pages = {113--127},
  number = {1},
  month = {May},
  abstract = {Recently, a new genetic process termed RNA editing has been identified
        showing insertions and deletions of nucleotides in particular RNA
        molecules. On the other hand, there are a few non-random statistical
        properties in genes: in particular, the periodicity modulo 3 (P3)
        associated with an open reading frame, the periodicity modulo 2 (P2)
        associated with alternating purine/pyrimidine stretches, the YRY(N)6YRY
        preferential occurrence (R = purine = adenine or guanine, Y = pyrimidine
        = cytosine or thymine, N = R or Y) representing a "code" of the DNA
        helix pitch, etc. The problem investigated here is whether a process
        of the type RNA editing can lead to the non-random statistical properties
        commonly observed in genes. This paper will show in particular that:
        The process of insertions and deletions of mononucleotides in the
        initial sequence [YRY(N)3]* [series of YRY(N)3] can lead to the periodicity
        modulo 2 (P2). The process of insertions and deletions of trinucleotides
        in the initial sequence [YRY(N)6]* [series of YRY(N)6] can lead to
        the periodicity modulo 3 (P3) and the YRY(N)6YRY preferential occurrence.
        Furthermore, these two processes lead to a strong correlation with
        the reality, namely the mononucleotide insertion/deletion process,
        with the 5' eukaryotic regions and the trinucleotide insertion/deletion
        process, with the eukaryotic protein coding genes.},
  institution = {Université de Franche-Comté, Laboratoire d'Informatique de Besançon,
        Unité Associée CNRS No 822, France.},
  keywords = {Chromosome Deletion; Computer Simulation; Humans; Models, Genetic;
        Mutagenesis, genetics; RNA, genetics},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {1379311},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1990,
  author = {D. G. Arquès and C. J. Michel},
  title = {Periodicities in coding and noncoding regions of the genes.},
  journal = {J Theor Biol},
  year = {1990},
  volume = {143},
  pages = {307--318},
  number = {3},
  month = {Apr},
  abstract = {Gene population statistical studies of protein coding genes and introns
        have identified two types of periodicities on the purine/pyrimidine
        alphabet: (i) the modulo 3 periodicity or coding periodicity (periodicity
        P3) in protein coding genes of eukaryotes, prokaryotes, viruses,
        chloroplasts, mitochondria, plasmids and in introns of viruses and
        mitochondria, and (ii) the modulo 2 periodicity (periodicity P2)
        in the eukaryotic introns. The periodicity study is herein extended
        to the 5' and 3' regions of eukaryotes, prokaryotes and viruses and
        shows: (i) the periodicity P3 in the 5' and 3' regions of eukaryotes.
        Therefore, these observations suggest a unitary and dynamic concept
        for the genes as for a given genome, the 5' and 3' regions have the
        genetic information for protein coding genes and for introns: (1)
        In the eukaryotic genome, the 5' (P2 and P3) and 3' (P2 and P3) regions
        have the information for protein coding genes (P3) and for introns
        (P2). The intensity of P3 is high in 5' regions and weak in 3' regions,
        while the intensity of P2 is weak in 5' regions and high in 3' regions.
        (2) In the prokaryotic genome, the 5' (P3) and 3' (P3) regions have
        the information for protein coding genes (P3). (3) In the viral genome,
        the 5' (P3) and 3' (P3) regions have the information for protein
        coding genes (P3) and for introns (P3). The absence of P2 in viral
        introns (in opposition to eukaryotic introns) may be related to the
        absence of P2 in 5' and 3' regions of viruses.},
  institution = {Université de Franche-Comté, Unité Associée CNRS No. 822, Besançon,
        France.},
  keywords = {Animals; Base Sequence; Eukaryotic Cells; Genes; Introns; Prokaryotic
        Cells; Purine Nucleotides; Pyrimidine Nucleotides; Repetitive Sequences,
        Nucleic Acid; Viruses, genetics},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {2385108},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1990a,
  author = {D. G. Arquès and C. J. Michel},
  title = {A model of DNA sequence evolution.},
  journal = {Bull Math Biol},
  year = {1990},
  volume = {52},
  pages = {741--772},
  number = {6},
  abstract = {Statistical studies of gene populations on the purine/pyrimidine alphabet
        have shown that the mean occurrence probability of the i-motif YRY(N)iYRY
        (R = purine, Y = pyrimidine, N = R or Y) is not uniform by varying
        i in the range, but presents a maximum at i = 6 in the following
        populations: protein coding genes of eukaryotes, prokaryotes, chloroplasts
        and mitochondria, and also viral introns, ribosomal RNA genes and
        transfer RNA genes (Arquès and Michel, 1987b, J. theor. Biol. 128,
        457-461). From the "universality" of this observation, we suggested
        that the oligonucleotide YRY(N)6 is a primitive one and that it has
        a central function in DNA sequence evolution (Arquès and Michel,
        1987b, J. theor. Biol. 128, 457-461). Following this idea, we introduce
        a concept of a model of DNA sequence evolution which will be validated
        according to a schema presented in three parts. In the first part,
        using the last version of the gene database, the YRY(N)6YRY preferential
        occurrence (maximum at i = 6) is confirmed for the populations mentioned
        above and is extended to some newly analysed populations: chloroplast
        introns, chloroplast 5' regions, mitochondrial 5' regions and small
        nuclear RNA genes. On the other hand, the YRY(N)6YRY preferential
        occurrence and periodicities are used in order to classify 18 gene
        populations. In the second part, we will demonstrate that several
        statistical features characterizing different gene populations (in
        particular the YRY(N)6YRY preferential occurrence and the periodicities)
        can be retrieved from a simple Markov model based on the mixing of
        the two oligonucleotides YRY(N)6 and YRY(N)3 and based on the percentages
        of RYR and YRY in the unspecified trinucleotides (N)3 of YRY(N)6
        and YRY(N)3. Several properties are identified and prove in particular
        that the oligonucleotide mixing is an independent process and that
        several different features are functions of a unique parameter. In
        the third part, the return of the model to the reality shows a strong
        correlation between reality and simulation concerning the presence
        of a large alternating purine/pyrimidine stretches and of periodicities.
        It also contributes to a greater understanding of biological reality,
        e.g. the presence or the absence of large alternating purine/pyrimidine
        stretches can be explained as being a simple consequence of the mixing
        of two particular oligonucleotides. Finally, we believe that such
        an approach is the first step toward a unified model of DNA sequence
        evolution allowing the molecular understanding of both the origin
        of life and the actual biological reality.},
  institution = {Université de Franche-Comté, Laboratoire d'Informatique de Besançon,
        Unité Associée CNRS No 822, France.},
  keywords = {Base Sequence; Biological Evolution; DNA, genetics; Genetics, Population;
        Models, Genetic},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {2279193},
  timestamp = {2011.05.05}
}

@ARTICLE{Arques1993a,
  author = {D. G. Arquès and C. J. Michel and K. Orieux},
  title = {Identification and simulation of new non-random statistical properties
        common to different populations of eukaryotic non-coding genes.},
  journal = {J Theor Biol},
  year = {1993},
  volume = {161},
  pages = {329--342},
  number = {3},
  month = {Apr},
  abstract = {The autocorrelation function analysing the occurrence probability
        of the i-motif YRY(N)iYRY in genes allows the identification of mainly
        two periodicities modulo 2, 3 and the preferential occurrence of
        the motif YRY(N)6YRY (R = purine = adenine or guanine, Y = pyrimidine
        = cytosine or thymine, N = R or Y). These non-random genetic statistical
        properties can be simulated by an independent mixing of the three
        oligonucleotides YRYRYR, YRYYRY and YRY(N)6 (Arquès & Michel, 1990b).
        The problem investigated in this study is whether new properties
        can be identified in genes with other autocorrelation functions and
        also simulated with an oligonucleotide mixing model. The two autocorrelation
        functions analysing the occurrence probability of the i-motifs RRR(N)iRRR
        and YYY(N)iYYY simultaneously identify three new non-random genetic
        statistical properties: a short linear decrease, local maxima for
        i identical to 3[6] (i = 3, 9, etc) and a large exponential decrease.
        Furthermore, these properties are common to three different populations
        of eukaryotic non-coding genes: 5' regions, introns and 3' regions
        (see section 2). These three non-random properties can also be simulated
        by an independent mixing of the four oligonucleotides R8, Y8, RRRYRYRRR,
        YYYRYRYYY and large alternating R/Y series. The short linear decrease
        is a result of R8 and Y8, the local maxima for i identical to 3[6],
        of RRRYRYRRR and YYYRYRYYY, and the large exponential decrease, of
        large alternating R/Y series (section 3). The biological meaning
        of these results and their relation to the previous oligonucleotide
        mixing model are presented in the Discussion.},
  doi = {10.1006/jtbi.1993.1059},
  institution = {Equipe de Biologie Théorique, Université de Franche-Comté, Laboratoire
        d'Informatique de Besançon, France.},
  keywords = {Animals; Biological Evolution; Genes, genetics; Models, Genetic; Models,
        Statistical; Mutation, genetics; Oligonucleotides, genetics; Probability},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S0022-5193(83)71059-3},
  pmid = {8331957},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1006/jtbi.1993.1059}
}

@ARTICLE{Arroyo08,
  author = {David Arroyo and Gonzalo Alvarez and Veronica Fernandez},
  title = {On the inadequacy of the logistic map for cryptographic applications},
  journal = {X Reunión Española sobre Criptología y Seguridad de la Información
        (X RECSI)},
  year = {2008},
  volume = {1},
  pages = {77-82},
  owner = {christophe},
  timestamp = {2010.03.01}
}

@MISC{Backofen99algorithmicapproach,
  author = {R. Backofen and S. Will and P. Clote},
  title = {Algorithmic Approach To Quantifying The Hydrophobic Force Contribution
        In Protein Folding},
  year = {1999}
}

@INPROCEEDINGS{bcgr11:ip,
  author = {Bahi, Jacques M. and Couchot, Jean-fran\c{c}ois and Guyeux, Christophe
        and Richard, Adrien},
  title = {On the Link Between Strongly Connected Iteration Graphs and Chaotic
        Boolean Discrete-Time Dynamical Systems},
  booktitle = {FCT'11, 18th Int. Symp. on Fundamentals of Computation Theory},
  year = {2011},
  volume = {*},
  series = {LNCS},
  pages = {***--***},
  address = {Oslo, Norway},
  month = aug,
  note = {To appear},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@ARTICLE{bg10:ij,
  author = {Bahi, Jacques M. and Guyeux, Christophe},
  title = {Hash Functions Using Chaotic Iterations},
  journal = {Journal of Algorithms \& Computational Technology},
  year = {2010},
  volume = {4},
  pages = {167--181},
  number = {2},
  classement = {ACLI},
  doi = {10.1260/1748-3018.4.2.167},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  impact-factor = {#},
  inhal = {no},
  isi-acro = {#},
  url = {http://dx.doi.org/10.1260/1748-3018.4.2.167}
}

@INPROCEEDINGS{guyeux10ter,
  author = {Bahi, Jacques M. and Guyeux, Christophe},
  title = {A new chaos-based watermarking algorithm},
  booktitle = {SECRYPT'10, Int. conf. on security and cryptography},
  year = {2010},
  pages = {455--458},
  address = {Athens, Greece},
  month = jul,
  publisher = {SciTePress},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{bgc11:ip,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Cote, Nathalie},
  title = {Chaos of Protein Folding},
  booktitle = {IJCNN 2011, Int. Joint Conf. on Neural Networks},
  year = {2011},
  pages = {***--***},
  address = {San Jose, California, United States},
  month = jul,
  note = {To appear},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{guyeux10bis,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Makhoul, Abdallah},
  title = {Efficient and Robust Secure Aggregation of Encrypted Data in Sensor
        Networks},
  booktitle = {SENSORCOMM'10, 4-th Int. Conf. on Sensor Technologies and Applications},
  year = {2010},
  pages = {472--477},
  address = {Venice-Mestre, Italy},
  month = jul,
  classement = {ACTI},
  doi = {10.1109/SENSORCOMM.2010.76},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no},
  url = {http://dx.doi.org/10.1109/SENSORCOMM.2010.76}
}

@INPROCEEDINGS{guyeuxVictoria,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Makhoul, Abdallah},
  title = {Secure Data Aggregation in Wireless Sensor Networks. Homomorphism
        versus Watermarking Approach},
  booktitle = {ADHOCNETS 2010, 2nd Int. Conf. on Ad Hoc Networks},
  year = {2010},
  volume = {49},
  series = {Lecture Notes in ICST},
  pages = {344--358},
  address = {Victoria, Canada},
  month = aug,
  classement = {ACTI},
  doi = {10.1007/978-3-642-17994-5_23},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no},
  url = {http://dx.doi.org/10.1007/978-3-642-17994-5_23}
}

@INPROCEEDINGS{bgs11:ip,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Salomon, Michel},
  title = {Building a Chaotic Proven Neural Network},
  booktitle = {ICCANS 2011, IEEE Int. Conf. on Computer Applications and Network
        Security},
  year = {2011},
  pages = {***--***},
  address = {Maldives, Maldives},
  month = may,
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{bgw10:ip,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Wang, Qianxue},
  title = {A Pseudo Random Numbers Generator Based on Chaotic Iterations. Application
        to Watermarking},
  booktitle = {WISM 2010, Int. Conf. on Web Information Systems and Mining},
  year = {2010},
  volume = {6318},
  series = {LNCS},
  pages = {202--211},
  address = {Sanya, China},
  month = oct,
  classement = {ACTI},
  doi = {10.1007/978-3-642-16515-3_26},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no},
  url = {http://dx.doi.org/10.1007/978-3-642-16515-3_26}
}

@INPROCEEDINGS{bgw09:ip,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Wang, Qianxue},
  title = {A novel pseudo-random generator based on discrete chaotic iterations},
  booktitle = {INTERNET'09, 1-st Int. Conf. on Evolving Internet},
  year = {2009},
  pages = {71--76},
  address = {Cannes, France},
  month = aug,
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{bmg10:onp,
  author = {Bahi, Jacques M. and Makhoul, Abdallah and Guyeux, Christophe},
  title = {Efficient and Robust Secure Aggregation of Encrypted Data in Sensor
        Networks for critical applications},
  booktitle = {RESSACS, Journ\'ee th\'ematique PHC/ResCom sur RESeaux de capteurS
        et Applications Critiques de Surveillance},
  year = {2010},
  address = {Bayonne, France},
  month = jun,
  note = {Communication orale},
  classement = {COM},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{guyeuxBayonne,
  author = {Bahi, Jacques M. and Makhoul, Abdallah and Guyeux, Christophe},
  title = {Efficient and Robust Secure Aggregation of Encrypted Data in Sensor
        Networks for critical applications},
  booktitle = {RESSACS, Journ\'ee th\'ematique PHC/ResCom sur RESeaux de capteurS
        et Applications Critiques de Surveillance},
  year = {2010},
  address = {Bayonne, France},
  month = jun,
  note = {Communication orale},
  classement = {COM},
  equipe = {and},
  inhal = {no}
}

@ARTICLE{bs10:ij,
  author = {Bahi, Jacques M. and Salomon, Michel},
  title = {A Decentralized Energy-based Diffusion Algorithm to Increase the
        Lifetime of {MANETs}},
  journal = {Computer Networks Journal},
  year = {2010},
  pages = {***--***},
  note = {Accepted manuscript. To appear},
  classement = {ACLI},
  equipe = {and},
  impact-factor = {1.201},
  inhal = {no},
  isi-acro = {#},
  publisher = {Elsevier}
}

@ARTICLE{Bahi2000,
  author = {J. M. Bahi},
  title = {Boolean totally asynchronous iterations},
  journal = {Int. Journal of Mathematical Algorithms},
  year = {2000},
  volume = {1},
  pages = {331--346},
  owner = {guyeux},
  timestamp = {17/02/2008}
}

@ARTICLE{Bahi2000bis,
  author = {Jacques M. Bahi},
  title = {Asynchronous iterative algorithms for nonexpansive linear systems},
  journal = {Journal of Parallel and Distributed Computing},
  year = {2000},
  volume = {60},
  pages = {92--112},
  owner = {guyeux},
  timestamp = {2009.01.10}
}

@ARTICLE{Bahi1999,
  author = {J. M. Bahi},
  title = {Parallel synchronous chaotic iterations for singular linear systems},
  journal = {Parallel Algorithms and Applications},
  year = {1999},
  volume = {14},
  pages = {19--35},
  owner = {guyeux},
  timestamp = {17/02/2008}
}

@ARTICLE{Bahi1998,
  author = {Jacques M. Bahi},
  title = {Algorithmes paralleles asynchrones pour les systemes singuliers},
  journal = {Comptes Rendus de l'Academie des Sciences},
  year = {1998},
  volume = {t. 326, serie 1},
  pages = {1421--1425},
  owner = {guyeux},
  timestamp = {2009.01.18}
}

@PHDTHESIS{bahi98,
  author = {Jacques M. Bahi},
  title = {Méthodes itératives dans des espaces produits. Application au calcul
        parallèle},
  school = {Université de Franche-Comté},
  year = {1998},
  type = {Habilitation à diriger des recherches},
  owner = {christophe},
  timestamp = {2010.08.24}
}

@PHDTHESIS{bahi91,
  author = {Jacques M. Bahi},
  title = {Algorithmes asynchrones pour des systèmes différentiels-algébriques.
        Simulation numérique sur des exemples de circuits électriques},
  school = {Université de Franche-Comté},
  year = {1991},
  owner = {christophe},
  timestamp = {2010.08.24}
}

@ARTICLE{bcv06:ij,
  author = {Jacques M. Bahi and Sylvain Contassot-Vivier},
  title = {Basins of attraction in fully asynchronous discrete-time discrete-state
        dynamic networks},
  journal = {IEEE Transactions on Neural Networks},
  year = {2006},
  volume = {17},
  pages = {397--408},
  number = {2},
  inhal = {no},
  owner = {guyeux},
  timestamp = {2009.12.04}
}

@ARTICLE{Bahi2002,
  author = {J.~M. Bahi and S. Contassot-Vivier},
  title = {Stability of fully asynchronous discrete-time discrete state dynamic
        networks},
  journal = {IEEE Transactions on Neural Networks},
  year = {2002},
  volume = {13(6)},
  pages = {1353-1363},
  owner = {guyeux},
  timestamp = {2009.02.14}
}

@TECHREPORT{bcgg10:ir,
  author = {Bahi, J. M. and Couchot, J.-F. and Grasset, O. and Guyeux, C.},
  title = {{D}iscrete {D}ynamical {S}ystems: {N}ecessary {D}ivergence {C}onditions
        for {S}ynchronous {I}terations},
  institution = {LIFC - Laboratoire d'{I}nformatique de l'{U}niversit\'{e} de {F}ranche
        {C}omt\'{e}},
  year = {2010},
  type = {Research Report},
  number = {RR2010-04},
  month = sep,
  pdf = {/~publis/papers/pub/2010/RR2010-04.pdf}
}

@ARTICLE{guyeux09,
  author = {Bahi, Jacques M. and Guyeux, Christophe},
  title = {Hash Functions Using Chaotic Iterations},
  journal = {Journal of Algorithms \& Computational Technology},
  year = {2010},
  volume = {4},
  pages = {167--181},
  number = {2},
  classement = {ACLNI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  impact-factor = {#},
  inhal = {no},
  isi-acro = {#}
}

@INPROCEEDINGS{guyeux10,
  author = {Bahi, Jacques M. and Guyeux, Christophe},
  title = {Topological chaos and chaotic iterations, application to Hash functions},
  booktitle = {WCCI'10, IEEE World Congress on Computational Intelligence},
  year = {2010},
  pages = {1--7},
  address = {Barcelona, Spain},
  month = jul,
  note = {Best paper award},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@MISC{ih10,
  author = {Jacques M. Bahi and Christophe Guyeux},
  title = {A chaos-based approach for information hiding security.},
  howpublished = {arXiv},
  month = {April},
  year = {2010},
  institution = {Computer Science Laboratory LIFC, University of Franche-Comte, France}
}

@ARTICLE{arxiv,
  author = {Jacques M. Bahi and Christophe Guyeux},
  title = {A watermarking algorithm satisfying topological chaos properties},
  journal = {CoRR},
  year = {2008},
  volume = {abs/0810.4713},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  ee = {http://arxiv.org/abs/0810.4713}
}

@ARTICLE{Bahi2008,
  author = {Jacques M. Bahi and Christophe Guyeux},
  title = {Chaotic iterations and topological chaos},
  year = {2008},
  abstract = {Chaotic iterations have been introduced on the one hand by Chazan,
        Miranker [5] and Miellou [9] in a numerical analysis context, and
        on the other hand by Robert [11] and Pellegrin [10] in the discrete
        dynamical systems framework. In both cases, the objective was to
        derive conditions of convergence of such iterations to a fixed state.
        In this paper, a new point of view is presented, the goal here is
        to derive conditions under which chaotic iterations admit a chaotic
        behaviour in a rigorous mathematical sense. Contrary to what has
        been studied in the literature, convergence is not desired. More
        precisely, we establish in this paper a link between the concept
        of chaotic iterations on a finite set and the notion of topological
        chaos [8], [6], [7]. We are motivated by concrete applications of
        our approach, such as the use of chaotic boolean iterations in the
        computer security field. Indeed, the concept of chaos is used in
        many areas of data security without real rigorous theoretical foundations,
        and without using the fundamental properties that allow chaos. The
        wish of this paper is to bring a bit more mathematical rigour in
        this field.},
  citeseerurl = {\href{http://arxiv.org/abs/0810.3154v1}{arXiv:0810.3154}},
  comment = {arXiv},
  comments = {6 pages},
  eprint = {\href{http://arxiv.org/abs/0810.3154v1}{arXiv:0810.3154}},
  oai2identifier = {0810.3154},
  owner = {guyeux},
  timestamp = {2008.10.23},
  url = {\href{http://arxiv.org/abs/0810.3154v1}{arXiv:0810.3154}}
}

@ARTICLE{arxivRNNchaos,
  author = {Jacques M. Bahi and Christophe Guyeux and Michel Salomon},
  title = {Building a Chaotic Proved Neural Network},
  journal = {CoRR},
  year = {2011},
  volume = {abs/1101.4351},
  ee = {http://arxiv.org/abs/1101.4351}
}

@INPROCEEDINGS{guyeuxTaiwan10,
  author = {Bahi, Jacques M. and Guyeux, Christophe and Wang, Qianxue},
  title = {Improving random number generators by chaotic iterations. Application
        in data hiding},
  booktitle = {ICCASM 2010, Int. Conf. on Computer Application and System Modeling},
  year = {2010},
  pages = {V13-643--V13-647},
  address = {Taiyuan, China},
  month = oct,
  classement = {ACTI},
  doi = {10.1109/ICCASM.2010.5622199},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no},
  url = {http://dx.doi.org/10.1109/ICCASM.2010.5622199}
}

@ARTICLE{Bahi2009,
  author = {Jacques M Bahi and Christian J Michel},
  title = {A stochastic model of gene evolution with time dependent pseudochaotic
        mutations.},
  journal = {Bull Math Biol},
  year = {2009},
  volume = {71},
  pages = {681--700},
  number = {3},
  month = {Apr},
  abstract = {We develop here a new class of stochastic models of gene evolution
        in which a random subset of the 64 possible trinucleotides mutates
        at each evolutionary time t according to some time dependent substitution
        probabilities. Therefore, at each time t, the numbers and the types
        of mutable trinucleotides are unknown. Thus, the mutation matrix
        changes at each time t. This pseudochaotic model developed generalizes
        the standard model in which all the trinucleotides mutate at each
        time t. It determines the occurrence probabilities at time t of trinucleotides
        which pseudochaotically mutate according to 3 time dependent substitution
        parameters associated with the 3 trinucleotide sites. The main result
        proves that under suitable assumptions, this pseudochaotic model
        converges to a uniform probability vector identical to that of the
        standard model. Furthermore, an application of this pseudochaotic
        model allows an evolutionary study of the 3 circular codes identified
        in both eukaryotic and prokaryotic genes. A circular code is a particular
        set of trinucleotides whose main property is the retrieval of the
        frames in genes locally, i.e., anywhere in genes and particularly
        without start codons, and automatically with a window of a few nucleotides.
        After a certain evolutionary time and with particular time dependent
        functions for the 3 substitution parameters, precisely an exponential
        decrease in the 1st and 2nd trinucleotide sites and an exponential
        increase in the 3rd one, this pseudochaotic model retrieves the main
        statistical properties of the 3 circular codes observed in genes.
        Furthermore, it leads to a circular code asymmetry stronger than
        the standard model (nonpseudochaotic) and, therefore, to a better
        correlation with the genes.},
  doi = {10.1007/s11538-008-9376-4},
  institution = {LIFC-EA 4157, Université de Franche-Comté, IUT de Belfort, BP 527,
        90016, Belfort Cedex, France. jacques.bahi@univ-fcomte.fr},
  keywords = {Evolution, Molecular; Genes; Models, Genetic; Mutation; Stochastic
        Processes},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {19198957},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1007/s11538-008-9376-4}
}

@ARTICLE{Bahi2008a,
  author = {Jacques M Bahi and Christian J Michel},
  title = {A stochastic model of gene evolution with chaotic mutations.},
  journal = {J Theor Biol},
  year = {2008},
  volume = {255},
  pages = {53--63},
  number = {1},
  month = {Nov},
  abstract = {We develop here a new class of stochastic models of gene evolution
        in which the mutations are chaotic, i.e. a random subset of the 64
        possible trinucleotides mutates at each evolutionary time t according
        to some substitution probabilities. Therefore, at each time t, the
        numbers and the types of mutable trinucleotides are unknown. Thus,
        the mutation matrix changes at each time t. The chaotic model developed
        generalizes the standard model in which all the trinucleotides mutate
        at each time t. It determines the occurrence probabilities at time
        t of trinucleotides which chaotically mutate according to three substitution
        parameters associated with the three trinucleotide sites. Two theorems
        prove that this chaotic model has a probability vector at each time
        t and that it converges to a uniform probability vector identical
        to that of the standard model. Furthermore, four applications of
        this chaotic model (with a uniform random strategy for the 64 trinucleotides
        and with a particular strategy for the three stop codons) allow an
        evolutionary study of the three circular codes identified in both
        eukaryotic and prokaryotic genes. A circular code is a particular
        set of trinucleotides whose main property is the retrieval of the
        frames in genes locally, i.e. anywhere in genes and particularly
        without start codons, and automatically with a window of a few nucleotides.
        After a certain evolutionary time and with particular values for
        the three substitution parameters, the chaotic models retrieve the
        main statistical properties of the three circular codes observed
        in genes. These applications also allow an evolutionary comparison
        between the standard and chaotic models.},
  doi = {10.1016/j.jtbi.2008.07.028},
  institution = {LIFC-EA 4157, Université de Franche-Comté, IUT de Belfort, BP 527,
        90016 Belfort Cedex, France. jacques.bahi@univ-fcomte.fr},
  keywords = {Animals; Computer Simulation; DNA, Circular, genetics; Evolution,
        Molecular; Genetic Code; Models, Genetic; Mutation; Nonlinear Dynamics;
        Stochastic Processes; Time},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S0022-5193(08)00395-0},
  pmid = {18706428},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1016/j.jtbi.2008.07.028}
}

@ARTICLE{Bahi2008bis,
  author = {Bahi, J. M. and Michel, C. J.},
  title = {A stochastic model of gene evolution with chaotic mutations},
  journal = {Journal of Theoretical Biology},
  year = {2008},
  volume = {255},
  pages = {53-63},
  owner = {guyeux},
  timestamp = {2009.01.10}
}

@ARTICLE{Bahi2004,
  author = {Jacques M Bahi and Christian J Michel},
  title = {A stochastic gene evolution model with time dependent mutations.},
  journal = {Bull Math Biol},
  year = {2004},
  volume = {66},
  pages = {763--778},
  number = {4},
  month = {Jul},
  abstract = {We develop here a new class of gene evolution models in which the
        nucleotide mutations are time dependent. These models allow to study
        nonlinear gene evolution by accelerating or decelerating the mutation
        rates at different evolutionary times. They generalize the previous
        ones which are based on constant mutation rates. The stochastic model
        developed in this class determines at some time t the occurrence
        probabilities of trinucleotides mutating according to 3 time dependent
        substitution parameters associated with the 3 trinucleotide sites.
        Therefore, it allows to simulate the evolution of the circular code
        recently observed in genes. By varying the class of function for
        the substitution parameters, 1 among 12 models retrieves after mutation
        the statistical properties of the observed circular code in the 3
        frames of actual genes. In this model, the mutation rate in the 3rd
        trinucleotide site increases during gene evolution while the mutation
        rates in the 1st and 2nd sites decrease. This property agrees with
        the actual degeneracy of the genetic code. This approach can easily
        be generalized to study evolution of motifs of various lengths, e.g.,
        dicodons, etc., with time dependent mutations.},
  doi = {10.1016/j.bulm.2003.10.004},
  institution = {LIFC - FRE CNRS 2661, IUT de Belfort, Université de Franche-Comté,
        BP 527, 90016 Belfort Cédex, France. bahi@iut-bm.univ-fcomte.fr},
  keywords = {Codon, genetics; Evolution, Molecular; Genes, genetics; Genetic Code,
        genetics; Models, Genetic; Mutation; Stochastic Processes},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S0092824003001174},
  pmid = {15210317},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1016/j.bulm.2003.10.004}
}

@ARTICLE{Banks92,
  author = {J. Banks and J. Brooks and G. Cairns and P. Stacey},
  title = {On Devaney's Definition of Chaos},
  journal = {Amer. Math. Monthly},
  year = {1992},
  volume = {99},
  pages = {332--334},
  keywords = {(c+),},
  owner = {guyeux},
  timestamp = {27/01/2008}
}

@MISC{Nist10,
  author = {E. Barker and A. Roginsky},
  title = {DRAFT NIST Special Publication 800-131 Recommendation for the Transitioning
        of Cryptographic Algorithms and Key Sizes},
  year = {2010},
  owner = {christophe},
  timestamp = {2010.08.18}
}

@ARTICLE{BarniBF03,
  author = {Mauro Barni and Franco Bartolini and Teddy Furon},
  title = {A general framework for robust watermarking security},
  journal = {Signal Processing},
  year = {2003},
  volume = {83},
  pages = {2069-2084},
  number = {10},
  note = {Special issue on Security of Data Hiding Technologies, invited paper},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  ee = {http://dx.doi.org/10.1016/S0165-1684(03)00168-3},
  owner = {guyeux},
  timestamp = {2009.06.30}
}

@ARTICLE{Baudet78,
  author = {Baudet, G\'{e}rard M.},
  title = {Asynchronous Iterative Methods for Multiprocessors},
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  volume = {25},
  pages = {226--244},
  number = {2},
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  issn = {0004-5411},
  publisher = {ACM}
}

@PHDTHESIS{Baz98,
  author = {Didier El Baz},
  title = {Contribution à l'algorithmique parallèle. Le concept d'asynchronisme
        : étude théorique, mise en œuvre, et application},
  school = {Institut national polytechnique de Toulouse},
  year = {1998},
  type = {Habilitation à diriger des recherches},
  owner = {christophe},
  timestamp = {2010.08.24}
}

@ARTICLE{bhr09c:bl,
  author = {Benoit, Anne and Hakem, Mourad and Robert, Yves},
  title = {Contention awareness and fault-tolerant scheduling for precedence
        constrained tasks in heterogeneous systems},
  journal = {Parallel Computing},
  year = {2009},
  volume = {35},
  pages = {83--108},
  number = {2},
  classement = {*},
  doi = {10.1016/j.parco.2008.11.001},
  equipe = {and},
  inhal = {no},
  url = {http://dx.doi.org/10.1016/j.parco.2008.11.001}
}

@INPROCEEDINGS{bhr08b:bl,
  author = {Benoit, Anne and Hakem, Mourad and Robert, Yves},
  title = {Fault tolerant scheduling of precedence task graphs on heterogeneous
        platforms},
  booktitle = {IPDPS'08},
  year = {2008},
  pages = {1--8},
  publisher = {IEEE Computer Society Press},
  classement = {*},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{Berger98,
  author = {Berger, Bonnie and Leighton, Tom},
  title = {Protein folding in the hydrophobic-hydrophilic (HP) is NP-complete},
  booktitle = {Proceedings of the second annual international conference on Computational
        molecular biology},
  year = {1998},
  series = {RECOMB '98},
  pages = {30--39},
  address = {New York, NY, USA},
  publisher = {ACM},
  acmid = {279080},
  isbn = {0-89791-976-9},
  location = {New York, New York, United States},
  numpages = {10}
}

@BOOK{Bertsekas89,
  title = {Parallel and distributed computation: numerical methods},
  publisher = {Prentice-Hall, Inc.},
  year = {1989},
  author = {Bertsekas, Dimitri P. and Tsitsiklis, John N.},
  address = {Upper Saddle River, NJ, USA},
  isbn = {0-13-648700-9}
}

@MISC{Bertsekas88paralleland,
  author = {Dimitri P. Bertsekas and John N. Tsitsiklis},
  title = {Parallel and distributed iterative algorithms: a selective survey},
  year = {1988}
}

@UNPUBLISHED{F.a,
  author = {F. Blanchard and E. Glasner and S. Kolyada and A.Maass},
  title = {On Li-Yorke pairs},
  note = {Preprint},
  optkey = {2000},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@UNPUBLISHED{F.,
  author = {F. Blanchard and B. Host and S. Ruette},
  title = {Asymptotic pairs in positive-entropy systems},
  note = {Preprint},
  optannote = {to appear in Ergod. Th. Dynam. Sys.},
  optkey = {2000},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{BFibe,
  author = {Dan Boneh and Matt Franklin},
  title = {Identity-Based Encryption from the {Weil} Pairing},
  journal = {SIAM J. of Computing},
  year = {2003},
  volume = {32},
  pages = {586-615},
  number = {3},
  note = {Extended abstract in Crypto'01}
}

@INCOLLECTION{boneh,
  author = {Boneh, Dan and Goh, Eu-Jin and Nissim, Kobbi},
  title = {Evaluating 2-DNF Formulas on Ciphertexts},
  year = {2005},
  pages = {325--341},
  abstract = {Let ψ be a 2-DNF formula on boolean variables x 1,..., x n ∈ {0,1}.
        We present a homomorphic public key encryption scheme that allows
        the public evaluation of ψ given an encryption of the variables x
        1,..., x n. In other words, given the encryption of the bits x 1,...,
        x n, anyone can create the encryption of ψ( x 1,..., x n). More generally,
        we can evaluate quadratic multi-variate polynomials on ciphertexts
        provided the resulting value falls within a small set. We present
        a number of applications of the system: 1 In a database of size n,
        the total communication in the basic step of the Kushilevitz-Ostrovsky
        PIR protocol is reduced from to . 2 An efficient election system
        based on homomorphic encryption where voters do not need to include
        non-interactive zero knowledge proofs that their ballots are valid.
        The election system is proved secure without random oracles but still
        efficient. 3 A protocol for universally verifiable computation.},
  citeulike-article-id = {2719460},
  citeulike-linkout-0 = {http://www.springerlink.com/content/wtt5caxkr94laxkg},
  journal = {Theory of Cryptography},
  keywords = {homomorphic, pairings},
  posted-at = {2008-04-25 21:53:15},
  priority = {2},
  url = {http://www.springerlink.com/content/wtt5caxkr94laxkg}
}

@ARTICLE{Bonneau01,
  author = {Bonneau, Richard and Baker, David},
  title = {AB INITIO PROTEIN STRUCTURE PREDICTION: Progress and Prospects},
  journal = {Annual Review of Biophysics and Biomolecular Structure},
  year = {2001},
  volume = {30},
  pages = {173-189},
  number = {1},
  doi = {10.1146/annurev.biophys.30.1.173}
}

@ARTICLE{Bowen,
  author = {R. Bowen},
  title = {Entropy for group endomorphisms and homogeneous spaces},
  journal = {Trans. Amer. Math. Soc.},
  year = {1971},
  volume = {153},
  pages = {401-414},
  owner = {guyeux},
  timestamp = {15/02/2008}
}

@ARTICLE{Bowen1971,
  author = {R. Bowen},
  title = {Periodic points and measures for Axiom A diffeomorphisms},
  journal = {Trans. Amer. Math. Soc.},
  year = {1971},
  volume = {154},
  pages = {377-397},
  owner = {guyeux},
  timestamp = {15/02/2008}
}

@ARTICLE{Braxenthaler97,
  author = {Michael Braxenthaler and R. Ron Unger and Ditza Auerbach and John
        Moult},
  title = {Chaos in protein dynamics},
  journal = {Proteins-structure Function and Bioinformatics},
  year = {1997},
  volume = {29},
  pages = {417--425},
  doi = {10.1002/(SICI)1097-0134(199712)29:4<417::AID-PROT2>3.3.CO;2-O},
  masid = {2824140}
}

@INPROCEEDINGS{Brumley03remotetiming,
  author = {David Brumley and Dan Boneh},
  title = {Remote Timing Attacks are Practical},
  booktitle = {Proceedings of the 12th USENIX Security Symposium},
  year = {2003},
  pages = {1--14}
}

@ARTICLE{Bohm1991375,
  author = {Gerald Böhm},
  title = {Protein folding and deterministic chaos: Limits of protein folding
        simulations and calculations},
  journal = {Chaos, Solitons \& Fractals},
  year = {1991},
  volume = {1},
  pages = {375 - 382},
  number = {4},
  doi = {DOI: 10.1016/0960-0779(91)90028-8},
  issn = {0960-0779},
  url = {http://www.sciencedirect.com/science/article/B6TJ4-46CBXVT-1X/2/370489c218e4c2732cd9b620ef50c696}
}

@INCOLLECTION{Cachin2004,
  author = {Cachin, Christian},
  title = {An Information-Theoretic Model for Steganography},
  booktitle = {Information Hiding},
  publisher = {Springer Berlin / Heidelberg},
  year = {1998},
  volume = {1525},
  series = {Lecture Notes in Computer Science},
  pages = {306-318},
  affiliation = {MIT Laboratory for Computer Science 545 Technology Square Cambridge
        MA 02139 USA}
}

@ARTICLE{Cam2006,
  author = {H. Cam and S. Ozdemir and P. Nair and D. Muthuavinashinappan and
        H. O. Sanli},
  title = {ESPDA: Energy-efficient secure pattern based data aggregation for
        wireless sensor networks.},
  journal = {Computer Communication journal (29)},
  year = {2006},
  pages = {446-455}
}

@ARTICLE{CarletCZ98,
  author = {Claude Carlet and Pascale Charpin and Victor Zinoviev},
  title = {Codes, Bent Functions and Permutations Suitable For DES-like Cryptosystems},
  journal = {Des. Codes Cryptography},
  year = {1998},
  volume = {15},
  pages = {125-156},
  number = {2},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

@INPROCEEDINGS{Castelluccia05efficientaggregation,
  author = {Claude Castelluccia},
  title = {Efficient aggregation of encrypted data in wireless sensor networks},
  booktitle = {MobiQuitous},
  year = {2005},
  pages = {109--117},
  publisher = {IEEE Computer Society}
}

@ARTICLE{Cayre2008,
  author = {Cayre, F. and Bas, P.},
  title = {Kerckhoffs-Based Embedding Security Classes for WOA Data Hiding},
  journal = {IEEE Transactions on Information Forensics and Security},
  year = {2008},
  volume = {3},
  pages = {1--15},
  number = {1},
  doi = {10.1109/TIFS.2007.916006},
  issn = {1556-6013},
  keywords = {cryptography, random sequences, spread spectrum communication, telecommunication
        security, watermarking, Kerckhoffs-based embedding security classes,
        WOA Data Hiding, pseudorandom sequences, spread-spectrum techniques,
        steganography security, watermark-only-attack, watermarking, Security,
        spread-spectrum (SS) watermarking},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@ARTICLE{Cayre2005,
  author = {Cayre, F. and Fontaine, C. and Furon, T.},
  title = {Watermarking security: theory and practice},
  journal = {IEEE Transactions on Signal Processing},
  year = {2005},
  volume = {53},
  pages = {3976--3987},
  number = {10},
  doi = {10.1109/TSP.2005.855418},
  issn = {1053-587X},
  keywords = {blind source separation, cryptography, watermarking, Fisher information
        matrix, blind source separation, cryptanalysis, information theory,
        spread spectrum techniques, substitutive scheme, watermarking security,
        Blind source separation, Fisher information matrix, equivocation,
        security, watermarking},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@ARTICLE{Chajakis91,
  author = {Chajakis, Emmanuel D. and Zenios, Stavros A.},
  title = {Synchronous and asynchronous implementations of relaxation algorithms
        for nonlinear network optimization},
  journal = {Parallel Comput.},
  year = {1991},
  volume = {17},
  pages = {873--894},
  number = {8},
  address = {Amsterdam, The Netherlands, The Netherlands},
  doi = {http://dx.doi.org/10.1016/S0167-8191(05)80072-9},
  issn = {0167-8191},
  publisher = {Elsevier Science Publishers B. V.}
}

@ARTICLE{Chan2007,
  author = {Chan, Haowen and Perrig, Adrian and Przydatek, Bartosz and Song,
        Dawn},
  title = {SIA: Secure information aggregation in sensor networks},
  journal = {J. Comput. Secur.},
  year = {2007},
  volume = {15},
  pages = {69--102},
  number = {1},
  address = {Amsterdam, The Netherlands, The Netherlands},
  issn = {0926-227X},
  publisher = {IOS Press}
}

@ARTICLE{Chandramouli06,
  author = {R. Chandramouli and S. Bapatla and K.P. Subbalakshmi},
  title = {Battery power-aware encryption},
  journal = {ACM transactions on information and system security},
  year = {2006},
  pages = {162--180},
  owner = {christophe},
  timestamp = {2010.07.31}
}

@ARTICLE{Charpin85,
  author = {Pascale Charpin},
  title = {A description of some extended cyclic codes with application to Reed-Solomon
        codes},
  journal = {Discrete Mathematics},
  year = {1985},
  volume = {56},
  pages = {117-124},
  number = {2-3},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  ee = {http://dx.doi.org/10.1016/0012-365X(85)90019-6}
}

@ARTICLE{Chazan69,
  author = {D. Chazan and W. Miranker},
  title = {Chaotic relaxation},
  journal = {Linear algebra and its applications},
  year = {1969},
  pages = {199-222},
  owner = {guyeux},
  timestamp = {2008.05.22}
}

@ARTICLE{Cheon2006,
  author = {Cheon, Jung Hee and Kim, Woo-Hwan and Nam, Hyun Soo},
  title = {Known-plaintext cryptanalysis of the Domingo-Ferrer algebraic privacy
        homomorphism scheme},
  journal = {Inf. Process. Lett.},
  year = {2006},
  volume = {97},
  pages = {118--123},
  number = {3},
  address = {Amsterdam, The Netherlands, The Netherlands},
  doi = {http://dx.doi.org/10.1016/j.ipl.2005.09.016},
  issn = {0020-0190},
  publisher = {Elsevier North-Holland, Inc.}
}

@MISC{Cheon03acryptanalysis,
  author = {Jung Hee Cheon and Hyun Soo Nam},
  title = {A Cryptanalysis of the Original Domingo-Ferrer's Algebraic Privacy
        Homomorphism},
  year = {2003}
}

@ARTICLE{Cheung05,
  author = {R.C.C. Cheung and N.J. Telle and W. Luk and P.Y.K. Cheung},
  title = {Secure encrypted-data aggregation for wireless sensor networks},
  journal = {IEEE Trans. on Very Large Scale Integration Systems},
  year = {2005},
  volume = {13},
  pages = {1048-1059},
  number = {9}
}

@ARTICLE{Chivian2005,
  author = {Chivian, Dylan and Kim, David E. and Malmström, Lars and Schonbrun,
        Jack and Rohl, Carol A. and Baker, David},
  title = {Prediction of CASP6 structures using automated robetta protocols},
  journal = {Proteins},
  year = {2005},
  volume = {61},
  pages = {157--166},
  number = {S7},
  issn = {1097-0134},
  keywords = {Rosetta, fragment assembly, de novo modeling, homology modeling, parametric
        alignment ensemble},
  owner = {christophe},
  publisher = {Wiley Subscription Services, Inc., A Wiley Company},
  timestamp = {2011.01.22},
  url = {http://dx.doi.org/10.1002/prot.20733}
}

@ARTICLE{Zhu06,
  author = {Congxu, Zhu and Xuefeng, Liao and Zhihua, Li},
  title = {Chaos-based multipurpose image watermarking algorithm},
  journal = {Wuhan University Journal of Natural Sciences},
  year = {2006},
  volume = {11},
  pages = {1675-1678},
  note = {10.1007/BF02831848},
  abstract = {To achieve the goal of image content authentication and copyright
        protection simultaneously, this paper presents a novel image dual
        watermarking method based on chaotic map. Firstly, the host image
        was split into many nonoverlapping small blocks, and the block-wise
        discrete cosine transform (DCT) is computed. Secondly, the robust
        watermarks, shuffled by the chaotic sequences, are embedded in the
        DC coefficients of blocks to achieve the goal of copyright protection.
        The semi-fragile watermarks, generated by chaotic map, are embedded
        in the AC coefficients of blocks to obtain the aim of image authentication.
        Both of them can be extracted without the original image. Simulation
        results demonstrate the effectiveness of our algorithm in terms of
        robustness and fragility.},
  affiliation = {Central South University School of Information Science and Engineering
        410083 Changsha, Hunan China},
  issn = {1007-1202},
  issue = {6},
  keyword = {Mathematics, general},
  publisher = {Wuhan University, co-published with Springer},
  url = {http://dx.doi.org/10.1007/BF02831848}
}

@ARTICLE{Conley1978,
  author = {C. Conley},
  title = {Isolated invariant sets and the Morse index},
  journal = {CBMS Regional Conference. AMS.},
  year = {1978},
  optvolume = {38},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Cornu2002,
  author = {Philippe Cornu and André Smolarz},
  title = {Image characterization by texture},
  journal = {Traitement du signal},
  year = {2002},
  volume = {19},
  pages = {29-35},
  file = {:/home/guyeux/Documents/Bibliotheque/These/Watermarking/Caractérisation d'images par textures associées.pdf:PDF},
  owner = {guyeux},
  timestamp = {2008.05.12}
}

@INPROCEEDINGS{Cox99,
  author = {Ingemar Cox and Matt L. Miller and Andrew L. Mckellips},
  title = {Watermarking as Communications With Side Information},
  booktitle = {Proceedings of the IEEE},
  year = {1999},
  pages = {1127--1141},
  owner = {christophe},
  timestamp = {2010.03.06}
}

@ARTICLE{Cox97securespread,
  author = {Ingemar J. Cox and Senior Member and Joe Kilian and F. Thomson Leighton
        and Talal Shamoon},
  title = {Secure spread spectrum watermarking for multimedia},
  journal = {IEEE Transactions on Image Processing},
  year = {1997},
  volume = {6},
  pages = {1673--1687}
}

@ARTICLE{Cramer96,
  author = {Christopher Cramer and Erol Gelenbe and Hakan Bakircioglu},
  title = {Video Compression with Random Neural Networks},
  journal = {Neural Networks for Identification, Control, and Robotics, International
        Workshop},
  year = {1996},
  volume = {0},
  pages = {0476},
  address = {Los Alamitos, CA, USA},
  isbn = {0-8186-7456-3},
  publisher = {IEEE Computer Society}
}

@INPROCEEDINGS{Crescenzi98,
  author = {Crescenzi, Pierluigi and Goldman, Deborah and Papadimitriou, Christos
        and Piccolboni, Antonio and Yannakakis, Mihalis},
  title = {On the complexity of protein folding (extended abstract)},
  booktitle = {Proceedings of the thirtieth annual ACM symposium on Theory of computing},
  year = {1998},
  series = {STOC '98},
  pages = {597--603},
  address = {New York, NY, USA},
  publisher = {ACM},
  acmid = {276875},
  isbn = {0-89791-962-9},
  location = {Dallas, Texas, United States},
  numpages = {7}
}

@ARTICLE{Dawei2004,
  author = {Zhao Dawei and Chen Guanrong and Liu Wenbo},
  title = {A chaos-based robust wavelet-domain watermarking algorithm},
  journal = {Chaos, Solitons and Fractals},
  year = {2004},
  volume = {22},
  pages = {47-54},
  owner = {guyeux},
  timestamp = {2008.10.07}
}

@MISC{1011.1638,
  author = {Anthony Desnos and Robert Erra and Eric Filiol},
  title = {Processor-Dependent Malware... and codes},
  year = {2010},
  comment = {arXiv:1011.1638},
  eprint = {arXiv:1011.1638}
}

@BOOK{devaney,
  title = {An Introduction to Chaotic Dynamical Systems},
  publisher = {Addison-Wesley},
  year = {1989},
  author = {Devaney, Robert L.},
  address = {Redwood City, CA},
  edition = {2nd}
}

@ARTICLE{diffie76,
  author = {Whitfield Diffie and Martin E. Hellman},
  title = {New Directions in Cryptography},
  journal = {IEEE Transactions on Information Theory},
  year = {1976},
  volume = {IT-22},
  pages = {644--654},
  number = {6},
  date = {November 1976},
  owner = {guyeux},
  timestamp = {2009.06.30},
  url = {citeseer.ist.psu.edu/diffie76new.html}
}

@INCOLLECTION{Dijk10,
  author = {van Dijk, Marten and Gentry, Craig and Halevi, Shai and Vaikuntanathan,
        Vinod},
  title = {Fully Homomorphic Encryption over the Integers},
  booktitle = {Advances in Cryptology – EUROCRYPT 2010},
  publisher = {Springer Berlin / Heidelberg},
  year = {2010},
  editor = {Gilbert, Henri},
  volume = {6110},
  series = {Lecture Notes in Computer Science},
  pages = {24-43},
  abstract = {We construct a simple fully homomorphic encryption scheme, using only
        elementary modular arithmetic. We use Gentry’s technique to construct
        a fully homomorphic scheme from a bootstrappable somewhat homomorphic
        scheme. However, instead of using ideal lattices over a polynomial
        ring, our bootstrappable encryption scheme merely uses addition and
        multiplication over the integers. The main appeal of our scheme is
        the conceptual simplicity. We reduce the security of our scheme to
        finding an approximate integer gcd – i.e., given a list of integers
        that are near-multiples of a hidden integer, output that hidden integer.
        We investigate the hardness of this task, building on earlier work
        of Howgrave-Graham.},
  affiliation = {MIT CSAIL}
}

@ARTICLE{Dill1985,
  author = {Dill, KA},
  title = {Theory for the folding and stability of globular proteins.},
  journal = {Biochemistry},
  year = {1985},
  volume = {24},
  pages = {1501-9--},
  number = {6},
  month = mar,
  abstract = {Using lattice statistical mechanics, we develop theory to account
        for the folding of a heteropolymer molecule such as a protein to
        the globular and soluble state. Folding is assumed to be driven by
        the association of solvophobic monomers to avoid solvent and opposed
        by the chain configurational entropy. Theory predicts a phase transition
        as a function of temperature or solvent character. Molecules that
        are too short or too long or that have too few solvophobic residues
        are predicted not to fold. Globular molecules should have a largely
        solvophobic core, but there is an entropic tendency for some residues
        to be "out of place", particularly in small molecules. For long chains,
        molecules comprised of globular domains are predicted to be thermodynamically
        more stable than spherical molecules. The number of accessible conformations
        in the globular state is calculated to be an exceedingly small fraction
        of the number available to the random coil. Previous estimates of
        this number, which have motivated kinetic theories of folding, err
        by many tens of orders of magnitude.},
  comment = {Research Support, Non-U.S. Gov't,Research Support, U.S. Gov't, P.H.S.,},
  keywords = {Mathematics, Models, Chemical, Polymers, Protein Conformation},
  owner = {christophe},
  timestamp = {2011.01.22},
  url = {http://ukpmc.ac.uk/abstract/MED/3986190}
}

@ARTICLE{Dill1995,
  author = {Dill, KA and Bromberg, S and Yue, K and Fiebig, KM and Yee, DP and
        Thomas, PD and Chan, HS},
  title = {Principles of protein folding--a perspective from simple exact models.},
  journal = {Protein Sci},
  year = {1995},
  volume = {4},
  pages = {561-602--},
  number = {4},
  month = apr,
  abstract = {General principles of protein structure, stability, and folding kinetics
        have recently been explored in computer simulations of simple exact
        lattice models. These models represent protein chains at a rudimentary
        level, but they involve few parameters, approximations, or implicit
        biases, and they allow complete explorations of conformational and
        sequence spaces. Such simulations have resulted in testable predictions
        that are sometimes unanticipated: The folding code is mainly binary
        and delocalized throughout the amino acid sequence. The secondary
        and tertiary structures of a protein are specified mainly by the
        sequence of polar and nonpolar monomers. More specific interactions
        may refine the structure, rather than dominate the folding code.
        Simple exact models can account for the properties that characterize
        protein folding: two-state cooperativity, secondary and tertiary
        structures, and multistage folding kinetics--fast hydrophobic collapse
        followed by slower annealing. These studies suggest the possibility
        of creating "foldable" chain molecules other than proteins. The encoding
        of a unique compact chain conformation may not require amino acids;
        it may require only the ability to synthesize specific monomer sequences
        in which at least one monomer type is solvent-averse.},
  address = {Department of Pharmaceutical Chemistry, University of California,
        San Francisco 94143-1204, USA.},
  comment = {Review,Research Support, Non-U.S. Gov't,Research Support, U.S. Gov't,
        Non-P.H.S.,Research Support, U.S. Gov't, P.H.S.,},
  keywords = {Amino Acid Sequence, Biological Evolution, Hydrogen Bonding, Models,
        Molecular, Molecular Sequence Data, Mutation, Protein Conformation,
        Protein Denaturation, Protein Folding, Temperature, Thermodynamics},
  owner = {christophe},
  timestamp = {2011.01.22},
  url = {http://ukpmc.ac.uk/abstract/MED/7613459}
}

@INPROCEEDINGS{Dobbertin96,
  author = {Dobbertin, Hans},
  title = {Cryptanalysis of MD4},
  booktitle = {Proceedings of the Third International Workshop on Fast Software
        Encryption},
  year = {1996},
  pages = {53--69},
  address = {London, UK},
  publisher = {Springer-Verlag},
  isbn = {3-540-60865-6}
}

@INPROCEEDINGS{DomingoFerrer2002,
  author = {Domingo-Ferrer, Josep},
  title = {A Provably Secure Additive and Multiplicative Privacy Homomorphism},
  booktitle = {ISC '02: Proceedings of the 5th International Conference on Information
        Security},
  year = {2002},
  pages = {471--483},
  address = {London, UK},
  publisher = {Springer-Verlag},
  isbn = {3-540-44270-7}
}

@ARTICLE{Dubchak1995,
  author = {I. Dubchak and I. Muchnik and S. R. Holbrook and S. H. Kim},
  title = {Prediction of protein folding class using global description of amino
        acid sequence.},
  journal = {Proc Natl Acad Sci U S A},
  year = {1995},
  volume = {92},
  pages = {8700--8704},
  number = {19},
  month = {Sep},
  __markedentry = {[guyeux]},
  abstract = {We present a method for predicting protein folding class based on
        global protein chain description and a voting process. Selection
        of the best descriptors was achieved by a computer-simulated neural
        network trained on a data base consisting of 83 folding classes.
        Protein-chain descriptors include overall composition, transition,
        and distribution of amino acid attributes, such as relative hydrophobicity,
        predicted secondary structure, and predicted solvent exposure. Cross-validation
        testing was performed on 15 of the largest classes. The test shows
        that proteins were assigned to the correct class (correct positive
        prediction) with an average accuracy of 71.7\%, whereas the inverse
        prediction of proteins as not belonging to a particular class (correct
        negative prediction) was 90-95\% accurate. When tested on 254 structures
        used in this study, the top two predictions contained the correct
        class in 91\% of the cases.},
  institution = {Department of Chemistry, University of California, Berkeley 94720,
        USA.},
  keywords = {Amino Acid Sequence; Amino Acids, chemistry; Computer Simulation;
        Databases, Factual; Models, Chemical; Neural Networks (Computer);
        Protein Folding; Protein Structure, Secondary; Proteins, chemistry/classification;
        Reproducibility of Results; Solvents},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {7568000},
  timestamp = {2011.07.18}
}

@BOOK{Dudley,
  title = {Real analysis and probability},
  publisher = {Cambridge University Press},
  author = {Richard M. Dudley},
  optpages = {209},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Tarazi84,
  author = {El Tarazi, Mouhamed Nabih},
  title = {Algorithmes mixtes asynchrones. Etude de convergence monotone},
  journal = {Numerische Mathematik},
  year = {1984},
  volume = {44},
  pages = {363-369},
  note = {10.1007/BF01405568},
  affiliation = {Department of Mathematics, Faculty of Science Kuwait University P.O.
        Box 5969 Kuwait},
  issn = {0029-599X},
  issue = {3},
  keyword = {Mathematics and Statistics},
  publisher = {Springer Berlin / Heidelberg},
  url = {http://dx.doi.org/10.1007/BF01405568}
}

@ARTICLE{Tarazi82,
  author = {El Tarazi, Mouhamed Nabih},
  title = {Some convergence results for asynchronous algorithms},
  journal = {Numerische Mathematik},
  year = {1982},
  volume = {39},
  pages = {325-340},
  note = {10.1007/BF01407866},
  affiliation = {Department of Mathematics, Faculty of Science Kuwait University P.O.
        Box 5969 Kuwait Kuwait},
  issn = {0029-599X},
  issue = {3},
  keyword = {Mathematics and Statistics},
  publisher = {Springer Berlin / Heidelberg},
  url = {http://dx.doi.org/10.1007/BF01407866}
}

@ARTICLE{Fei2005,
  author = {Peng Fei and Qiu Shui-Sheng and Long Min},
  title = {A secure digital signature algorithm based on elliptic curve and
        chaotic mappings},
  journal = {Circuits Systems Signal Processing},
  year = {2005},
  volume = {24, No. 5},
  pages = {585--597},
  owner = {guyeux},
  timestamp = {2009.01.16}
}

@BOOK{Feigenbaum1908,
  title = {Universal behavior in nonlinear systems},
  publisher = {Los Alamos Science},
  year = {1908},
  author = {Feigenbaum},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Felsenstein1980,
  author = {J. Felsenstein},
  title = {A view of population genetics.},
  journal = {Science},
  year = {1980},
  volume = {208},
  pages = {1253},
  number = {4449},
  month = {Jun},
  doi = {10.1126/science.208.4449.1253},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {208/4449/1253},
  pmid = {17830806},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1126/science.208.4449.1253}
}

@BOOK{Filiol09,
  title = {Les virus informatiques : techniques virales et antivirales avancées},
  year = {2009},
  editor = {Springer},
  author = {Eric Filiol},
  owner = {christophe},
  timestamp = {2010.10.13}
}

@INPROCEEDINGS{FiliolBlackHat,
  author = {Eric Filiol},
  title = {Passive and Active Leakage of Secret Data from Non Networked Computer},
  booktitle = {Black Hat},
  year = {2008},
  owner = {christophe},
  timestamp = {2010.11.28}
}

@PHDTHESIS{Formenti2003,
  author = {Enrico Formenti},
  title = {De l'algorithmique du chaos dans les systèmes dynamiques discrets},
  school = {Université de Provence},
  year = {2003},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@PHDTHESIS{Formenti1998,
  author = {Enrico Formenti},
  title = {Automates cellulaires et chaos : de la vision topologique à la vision
        algorithmique},
  school = {\'Ecole Normale Supérieure de Lyon},
  year = {1998},
  optmonth = {Octobre},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Frey2006,
  author = {Gabriel Frey and Christian J Michel},
  title = {Identification of circular codes in bacterial genomes and their use
        in a factorization method for retrieving the reading frames of genes.},
  journal = {Comput Biol Chem},
  year = {2006},
  volume = {30},
  pages = {87--101},
  number = {2},
  month = {Apr},
  abstract = {We developed a statistical method that allows each trinucleotide to
        be associated with a unique frame among the three possible ones in
        a (protein coding) gene. An extensive gene study in 175 complete
        bacterial genomes based on this statistical approach resulted in
        identification of 72 new circular codes. Finding a circular code
        enables an immediate retrieval of the reading frame locally anywhere
        in a gene. No knowledge of location of the start codon is required
        and a short window of only a few nucleotides is sufficient for automatic
        retrieval. We have therefore developed a factorization method (that
        explores previously found circular codes) for retrieving the reading
        frames of bacterial genes. Its principle is new and easy to understand.
        Neither complex treatment nor specific information on the nucleotide
        sequences is necessary. Moreover, the method can be used for short
        regions in nucleotide sequences (less than 25 nucleotides in protein
        coding genes). Selected additional properties of circular codes and
        their possible biological consequences are also discussed.},
  doi = {10.1016/j.compbiolchem.2005.11.001},
  institution = {Equipe de Bioinformatique Théorique, LSIIT (UMR CNRS-ULP 7005), Université
        Louis Pasteur de Strasbourg, Pôle API, Boulevard Sébastien Brant,
        67400 Illkirch, France. frey@dpt-info.u-strasbg.fr},
  keywords = {Base Sequence; Computational Biology; Genes, Bacterial; Genome, Bacterial;
        Genomics, statistics /&/ numerical data; Models, Genetic; Models,
        Statistical; Reading Frames},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S1476-9271(05)00111-8},
  pmid = {16439185},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1016/j.compbiolchem.2005.11.001}
}

@ARTICLE{Frey2006a,
  author = {Gabriel Frey and Christian J Michel},
  title = {An analytical model of gene evolution with six mutation parameters:
        an application to archaeal circular codes.},
  journal = {Comput Biol Chem},
  year = {2006},
  volume = {30},
  pages = {1--11},
  number = {1},
  month = {Feb},
  abstract = {We develop here an analytical evolutionary model based on a trinucleotide
        mutation matrix 64 x 64 with six substitution parameters associated
        with the transitions and transversions in the three trinucleotide
        sites. It generalizes the previous models based on the nucleotide
        mutation matrices 4 x 4 and the trinucleotide mutation matrix 64
        x 64 with three parameters. It determines at some time t the exact
        occurrence probabilities of trinucleotides mutating randomly according
        to six substitution parameters. An application of this model allows
        an evolutionary study of the common circular code COM and the 15
        archaeal circular codes X which have been recently identified in
        several archaeal genomes. The main property of a circular code is
        the retrieval of the reading frames in genes, both locally, i.e.
        anywhere in genes and in particular without a start codon, and automatically
        with a window of a few nucleotides. In genes, the circular code is
        superimposed on the traditional genetic one. Very unexpectedly, the
        evolutionary model demonstrates that the archaeal circular codes
        can derive from the common circular code subjected to random substitutions
        with particular values for six substitutions parameters. It has a
        strong correlation with the statistical observations of three archaeal
        codes in actual genes. Furthermore, the properties of these substitution
        rates allow proposal of an evolutionary classification of the 15
        archaeal codes into three main classes according to this model. In
        almost all the cases, they agree with the actual degeneracy of the
        genetic code with substitutions more frequent in the third trinucleotide
        site and with transitions more frequent that transversions in any
        trinucleotide site.},
  doi = {10.1016/j.compbiolchem.2005.09.001},
  institution = {Equipe de Bioinformatique Théorique, LSIIT (UMR CNRS-ULP 7005), Université
        Louis Pasteur de Strasbourg, Pôle API, Boulevard Sébastien Brant,
        67400 Illkirch, France. frey@dpt-info.u-strasbg.fr},
  keywords = {Archaea, genetics; DNA, Circular; Evolution, Molecular; Genetic Code;
        Genome, Archaeal; Models, Genetic; Mutation; Trinucleotide Repeats},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pii = {S1476-9271(05)00083-6},
  pmid = {16324886},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1016/j.compbiolchem.2005.09.001}
}

@INPROCEEDINGS{fgb11:ip,
  author = {Friot, Nicolas and Guyeux, Christophe and Bahi, Jacques},
  title = {Chaotic Iterations for Steganography - Stego-security and chaos-security},
  booktitle = {SECRYPT'2011, Int. Conf. on Security and Cryptography},
  year = {2011},
  pages = {***--***},
  address = {Sevilla, Spain},
  month = jul,
  note = {To appear},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@MISC{Frisch,
  author = {Alain Frisch},
  title = {Entropie topologique et définition du chaos},
  year = {1998},
  note = {Rapport de tipe},
  file = {Tipe_Entropie Topologique et Definition du Chaos (Alain Frisch).ps:Chaos/Tipe_Entropie Topologique et Definition du Chaos (Alain Frisch).ps:PDF},
  keywords = {Chaos, Entropie Topologique, Tipe},
  owner = {guyeux},
  timestamp = {2008.01.02},
  url = {http://alain.frisch.fr/math.html}
}

@MISC{Frisch98,
  author = {Alain Frisch},
  title = {Entropie topologique et définition du chaos},
  year = {1998},
  note = {[En ligne; Page disponible le 12-août-2010]},
  url = {\url{http://alain.frisch.fr/math.html}}
}

@ARTICLE{Frommer97asynchronousweighted,
  author = {Andreas Frommer and Hartmut Schwandt and Daniel and Daniel B. Szyld},
  title = {Asynchronous Weighted Additive Schwarz Methods},
  journal = {Electronic Transactions on Numerical Analysis},
  year = {1997},
  volume = {5},
  pages = {48--61}
}

@MISC{Frommer94asynchronoustwo-stage,
  author = {Andreas Frommer and Daniel B. Szyld},
  title = {Asynchronous Two-Stage Iterative Methods},
  year = {1994}
}

@BOOK{J1992,
  title = {Introduction to Chaos and Coherence},
  publisher = {IOP Publishing},
  year = {1992},
  author = {J. Frøyland},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@MISC{Furon2002,
  author = {T. Furon},
  title = {Security analysis},
  year = {2002},
  note = {European Project IST-1999-10987 CERTIMARK, Deliverable D.5.5},
  owner = {guyeux},
  timestamp = {2009.06.30}
}

@ARTICLE{Furon08,
  author = {Furon, Teddy and Bas, Patrick},
  title = {Broken arrows},
  journal = {EURASIP J. Inf. Secur.},
  year = {2008},
  volume = {2008},
  pages = {1--13},
  address = {New York, NY, United States},
  doi = {http://dx.doi.org/10.1155/2008/597040},
  issn = {1687-4161},
  owner = {christophe},
  publisher = {Hindawi Publishing Corp.},
  timestamp = {2010.03.06}
}

@ARTICLE{P1150442004,
  author = {G.S.El-Taweel and H.M. Onsi and M.Samy and M.G. Darwish},
  title = {Secure and Non-Blind Watermarking Scheme for Color Images Based on
        DWT},
  journal = {ICGST International Journal on Graphics, Vision and Image Processing},
  year = {2005},
  volume = {05},
  pages = {1--5},
  month = {April},
  issue = {4},
  owner = {christophe},
  timestamp = {2010.03.07}
}

@INPROCEEDINGS{Gentry09,
  author = {Gentry, Craig},
  title = {Fully homomorphic encryption using ideal lattices},
  booktitle = {STOC '09: Proceedings of the 41st annual ACM symposium on Theory
        of computing},
  year = {2009},
  pages = {169--178},
  address = {New York, NY, USA},
  publisher = {ACM},
  doi = {http://doi.acm.org/10.1145/1536414.1536440},
  isbn = {978-1-60558-506-2},
  location = {Bethesda, MD, USA}
}

@INPROCEEDINGS{Girao04,
  author = {J. Girao and M. Schneider and D. Westhoff},
  title = {CDA: Concealed data aggregation in wireless sensor networks},
  booktitle = {Proceedings of the ACM Workshop on Wireless Security},
  year = {2004},
  owner = {christophe},
  timestamp = {2010.07.31}
}

@CONFERENCE{Gotsman88,
  author = {C. Gotsman and D. Lehmann and E. Shamir},
  title = {Asynchronous Dynamics of Random Boolean Networks},
  booktitle = {San Diego '88 Neural Networks Conference},
  year = {1988},
  owner = {guyeux},
  timestamp = {30/03/2008}
}

@ARTICLE{Guckenheimer1979,
  author = {J. Guckenheimer},
  title = {Sensitive dependence to initial conditions for one-dimensional maps},
  journal = {Comm. Math. Phys.},
  year = {1979},
  optpages = {133-160},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@BOOK{J.1983,
  title = {Nonlinear oscillations, dynamical systems, and bifurcations of vector
        fields},
  publisher = {Springer Verlag},
  year = {1983},
  author = {J. Guckenheimer and P. Holmes},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Guo20093201,
  author = {Wei Guo and Xiaoming Wang and Dake He and Yang Cao},
  title = {Cryptanalysis on a parallel keyed hash function based on chaotic
        maps},
  journal = {Physics Letters A},
  year = {2009},
  volume = {373},
  pages = {3201 - 3206},
  number = {36},
  abstract = {This Letter analyzes the security of a novel parallel keyed hash function
        based on chaotic maps, proposed by Xiao et al. to improve the efficiency
        in parallel computing environment. We show how to devise forgery
        attacks on Xiao's scheme with differential cryptanalysis and give
        the experiment results of two kinds of forgery attacks firstly. Furthermore,
        we discuss the problem of weak keys in the scheme and demonstrate
        how to utilize weak keys to construct collision.},
  issn = {0375-9601},
  keywords = {Cryptanalysis}
}

@PHDTHESIS{GuyeuxThese10,
  author = {Christophe Guyeux},
  title = {Le d\'{e}sordre des it\'{e}rations chaotiques et leur utilit\'{e}
        en s\'{e}curit\'{e} informatique},
  school = {Universit\'{e} de Franche-Comt\'{e}},
  year = {2010},
  owner = {christophe},
  timestamp = {2010.12.21}
}

@MISC{gb11:onp,
  author = {Guyeux, Christophe and Bahi, Jacques},
  title = {\'Etude topologique de l'\'etalement de spectre},
  howpublished = {Journ\'ees Codes et St\'eganographie, \'Ecoles Militaires de Saint-Cyr,
        Co\"etquidan},
  month = jan,
  year = {2011},
  classement = {COM},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{bg10:ip,
  author = {Guyeux, Christophe and Bahi, Jacques},
  title = {An improved watermarking algorithm for Internet applications},
  booktitle = {INTERNET'2010. The 2nd Int. Conf. on Evolving Internet},
  year = {2010},
  pages = {119--124},
  address = {Valencia, Spain},
  month = sep,
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@INPROCEEDINGS{gfb10:ip,
  author = {Guyeux, Christophe and Friot, Nicolas and Bahi, Jacques},
  title = {Chaotic iterations versus Spread-spectrum: chaos and stego security},
  booktitle = {IIH-MSP'10, 6-th Int. Conf. on Intelligent Information Hiding and
        Multimedia Signal Processing},
  year = {2010},
  pages = {208--211},
  address = {Darmstadt, Germany},
  month = oct,
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@ARTICLE{friot10,
  author = {Christophe Guyeux and Nicolas Friot and Jacques M. Bahi},
  title = {A more secure information hiding scheme than spread-spectrum obtained
        by chaos-security},
  journal = {arXiv 0032565},
  year = {2010},
  owner = {guyeux},
  timestamp = {2010.04.30}
}

@BOOK{ECC,
  title = {Guide to Elliptic Curve Cryptography},
  publisher = {Springer Professional Computing},
  year = {2004},
  editor = {Springer},
  author = {D. Hankerson and A. Menezes and S. Vanstone},
  owner = {christophe},
  timestamp = {2010.07.31}
}

@ARTICLE{Hasegawa1985,
  author = {M. Hasegawa and H. Kishino and T. Yano},
  title = {Dating of the human-ape splitting by a molecular clock of mitochondrial
        DNA.},
  journal = {J Mol Evol},
  year = {1985},
  volume = {22},
  pages = {160--174},
  number = {2},
  abstract = {A new statistical method for estimating divergence dates of species
        from DNA sequence data by a molecular clock approach is developed.
        This method takes into account effectively the information contained
        in a set of DNA sequence data. The molecular clock of mitochondrial
        DNA (mtDNA) was calibrated by setting the date of divergence between
        primates and ungulates at the Cretaceous-Tertiary boundary (65 million
        years ago), when the extinction of dinosaurs occurred. A generalized
        least-squares method was applied in fitting a model to mtDNA sequence
        data, and the clock gave dates of 92.3 +/- 11.7, 13.3 +/- 1.5, 10.9
        +/- 1.2, 3.7 +/- 0.6, and 2.7 +/- 0.6 million years ago (where the
        second of each pair of numbers is the standard deviation) for the
        separation of mouse, gibbon, orangutan, gorilla, and chimpanzee,
        respectively, from the line leading to humans. Although there is
        some uncertainty in the clock, this dating may pose a problem for
        the widely believed hypothesis that the pipedal creature Australopithecus
        afarensis, which lived some 3.7 million years ago at Laetoli in Tanzania
        and at Hadar in Ethiopia, was ancestral to man and evolved after
        the human-ape splitting. Another likelier possibility is that mtDNA
        was transferred through hybridization between a proto-human and a
        proto-chimpanzee after the former had developed bipedalism.},
  keywords = {Animals; Biological Evolution; DNA, Mitochondrial, genetics; Genes;
        Haplorhini, genetics; Humans; Mathematics; Models, Genetic; Nucleic
        Acid Hybridization; Primates, genetics; Proteins, genetics; Species
        Specificity},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {3934395},
  timestamp = {2011.05.05}
}

@BOOK{R1994,
  title = {A First Course in Discrete Dynamical Systems},
  publisher = {Springer-Verlag},
  year = {1994},
  author = {R. Homlgren},
  optpages = {106},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@INCOLLECTION{Hoque09,
  author = {Hoque, Md. and Chetty, Madhu and Sattar, Abdul},
  title = {Genetic Algorithm in Ab Initio Protein Structure Prediction Using
        Low Resolution Model: A Review},
  booktitle = {Biomedical Data and Applications},
  publisher = {Springer Berlin Heidelberg},
  year = {2009},
  editor = {Sidhu, Amandeep and Dillon, Tharam},
  volume = {224},
  series = {Studies in Computational Intelligence},
  pages = {317-342},
  affiliation = {IIIS, Griffith University, Nathan, QLD-4111 Australia}
}

@CONFERENCE{Houmansadr09,
  author = {A. Houmansadr and N. Kiyavash and N. Borisov},
  title = {Rainbow: A robust and invisible non-blind watermark for network flows},
  booktitle = {NDSS’09: 16th Annual Network and Distributed System Security Symposium},
  year = {2009},
  owner = {christophe},
  timestamp = {2010.03.07}
}

@ARTICLE{Huang,
  author = {Huang, Shih-I and Shieh, Shiuhpyng and Tygar, J.},
  title = {Secure encrypted-data aggregation for wireless sensor networks},
  journal = {Wireless Networks},
  abstract = {Abstract\&nbsp;\&nbsp;This paper proposes a secure encrypted-data
        aggregation scheme for wireless sensor networks. Our design for data
        aggregation eliminates redundant sensor readings without using encryption
        and maintains data secrecy and privacy during transmission. Conventional
        aggregation functions operate when readings are received in plaintext.
        If readings are encrypted, aggregation requires decryption creating
        extra overhead and key management issues. In contrast to conventional
        schemes, our proposed scheme provides security and privacy, and duplicate
        instances of original readings will be aggregated into a single packet.
        Our scheme is resilient to known-plaintext attacks, chosen-plaintext
        attacks, ciphertext-only attacks and man-in-the-middle attacks. Our
        experiments show that our proposed aggregation method significantly
        reduces communication overhead and can be practically implemented
        in on-the-shelf sensor platforms.},
  citeulike-article-id = {4499496},
  citeulike-linkout-0 = {http://dx.doi.org/10.1007/s11276-009-0177-y},
  citeulike-linkout-1 = {http://www.springerlink.com/content/g573138072642u63},
  doi = {10.1007/s11276-009-0177-y},
  posted-at = {2009-05-10 09:55:44},
  url = {http://dx.doi.org/10.1007/s11276-009-0177-y}
}

@ARTICLE{Huang10,
  author = {Huang, Shih-I and Shieh, Shiuhpyng and Tygar, J. D.},
  title = {Secure encrypted-data aggregation for wireless sensor networks},
  journal = {Wirel. Netw.},
  year = {2010},
  volume = {16},
  pages = {915--927},
  number = {4},
  address = {Hingham, MA, USA},
  doi = {http://dx.doi.org/10.1007/s11276-009-0177-y},
  issn = {1022-0038},
  publisher = {Kluwer Academic Publishers}
}

@ARTICLE{W.2001,
  author = {W. Huang and X. Ye},
  title = {Homeomorphisms with the whole compacta being scrambled sets},
  journal = {Ergod. Th. Dynam. Systems},
  year = {2001},
  optnumber = {1},
  optpages = {77-91},
  optvolume = {21},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Hurley1982,
  author = {M. Hurley},
  title = {Attractors, persistence and density of their bassin},
  journal = {Transactions of AMS},
  year = {1982},
  optpages = {247-271},
  optvolume = {269},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@INPROCEEDINGS{Islam:2009:NMA:1695134.1695181,
  author = {Islam, Md. Kamrul and Chetty, Madhu},
  title = {Novel Memetic Algorithm for Protein Structure Prediction},
  booktitle = {Proceedings of the 22nd Australasian Joint Conference on Advances
        in Artificial Intelligence},
  year = {2009},
  series = {AI '09},
  pages = {412--421},
  address = {Berlin, Heidelberg},
  publisher = {Springer-Verlag},
  acmid = {1695181},
  isbn = {978-3-642-10438-1},
  keywords = {Guided search space, Memetic Algorithm, Modified fitness function,
        Pair-wise-interchange, Schema preservation, Tabu Search},
  location = {Melbourne, Australia},
  numpages = {10}
}

@PHDTHESIS{Jacquemard77,
  author = {C. Jacquemard},
  title = {Contribution à l'étude d'algorithmes à convergence monotone},
  school = {Université de Franche-Comté},
  year = {1977},
  owner = {christophe},
  timestamp = {2010.08.25}
}

@BOOK{Jukes69,
  title = {{Evolution of Protein Molecules}},
  publisher = {Academy Press},
  year = {1969},
  editor = {Munro, H. N.},
  author = {Jukes, T. H. and Cantor, C. R.},
  booktitle = {Evolution of Protein Molecules},
  citeulike-article-id = {1673661},
  keywords = {compbio, fresco},
  posted-at = {2007-09-19 06:23:18},
  priority = {2}
}

@INPROCEEDINGS{Kalker2001,
  author = {Kalker, T.},
  title = {Considerations on watermarking security},
  year = {2001},
  pages = {201--206},
  abstract = {In this paper we address the usually implicit assumption that digital
        watermarking has as its main target copyright and copy protection
        applications. From these target applications a great many conclusions
        are drawn about the required security of a watermarking system, and
        in fact, a considerably percentage of the watermarking literature
        has this very topic as its main focus of attention. In this paper
        we take a step back, and try to do a more careful analysis of the
        'watermarking-is-for-security-applications' paradigm. The intention
        of this paper is to discuss the meaning of the concept security in
        the context of watermarking, and try to show that one has to be careful
        in using analogies from the related field of cryptography},
  citeulike-article-id = {1226513},
  journal = {2001 IEEE Fourth Workshop on Multimedia Signal Processing},
  keywords = {security, wateramarking},
  owner = {guyeux},
  posted-at = {2007-04-14 14:30:06},
  priority = {2},
  timestamp = {2009.06.30}
}

@ARTICLE{Kerckhoffs83,
  author = {Kerckhoffs, Auguste},
  title = {La cryptographie militaire},
  journal = {Journal des sciences militaires},
  year = {1883},
  volume = {IX},
  pages = {5--83},
  month = {January},
  abstract = {pp. 161–191, Feb. 1883.},
  citeulike-article-id = {505508},
  keywords = {cryptography, master},
  owner = {guyeux},
  posted-at = {2006-02-15 04:49:15},
  priority = {2},
  timestamp = {2009.06.30}
}

@ARTICLE{Kimura80,
  author = {Kimura, Motoo},
  title = {A simple method for estimating evolutionary rates of base substitutions
        through comparative studies of nucleotide sequences},
  journal = {Journal of Molecular Evolution},
  year = {1980},
  volume = {16},
  pages = {111-120},
  note = {10.1007/BF01731581},
  affiliation = {National Institute of Genetics 411 Mishima Japan},
  issn = {0022-2844},
  issue = {2},
  keyword = {Biomedical and Life Sciences},
  publisher = {Springer New York},
  url = {http://dx.doi.org/10.1007/BF01731581}
}

@ARTICLE{Knudsen94,
  author = {Knudsen},
  title = {Chaos Without Nonperiodicity},
  journal = {Amer. Math. Monthly},
  year = {1994},
  volume = {101},
  owner = {guyeux},
  timestamp = {27/01/2008}
}

@PHDTHESIS{Knudsen1994a,
  author = {C. Knudsen},
  title = {Aspects of noninvertible dynamics and chaos},
  school = {Technical University of Denmark},
  year = {1994},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Kocarev06,
  author = {L. Kocarev and J. Szczepanski and J.M. Amigo and I. Tomovski},
  title = {Discrete Chaos - I: Theory},
  journal = {IEEE Trans. on Circuits Systems},
  year = {2006},
  volume = {53},
  pages = {1300-1309},
  owner = {christophe},
  timestamp = {2010.10.10}
}

@INPROCEEDINGS{Kocher95cryptanalysisof,
  author = {Paul C. Kocher},
  title = {Cryptanalysis of Diffie-Hellman, RSA, DSS, and Other Systems Using
        Timing Attacks (Extended Abstract)},
  booktitle = {Advances in Cryptology, CRYPTO '95: 15th Annual International Cryptology
        Conference},
  year = {1995},
  pages = {27--31},
  publisher = {Springer-Verlag}
}

@ARTICLE{Kullback1951,
  author = {Kullback, Solomon and Leibler, Richard A.},
  title = {On Information and Sufficiency},
  journal = {The Annals of Mathematical Statistics},
  year = {1951},
  volume = {22},
  pages = {79--86},
  number = {1},
  citeulike-article-id = {3245942},
  keywords = {file-import-08-09-12},
  owner = {guyeux},
  posted-at = {2008-09-12 14:30:37},
  priority = {2},
  timestamp = {2009.06.29}
}

@MISC{ledoux,
  author = {Eshter Ledoux},
  title = {Introduction à la théorie du chaos},
  year = {2002},
  note = {[En ligne; Page disponible le 12-août-2010]},
  url = {\url{http://www.nux.be/eledoux/mem/node1.html}}
}

@BOOK{Lehning1997,
  title = {Analyse en dimension finie},
  publisher = {Masson},
  year = {1997},
  author = {Lehning},
  optpages = {28},
  optvolume = {4},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@ARTICLE{Lenstra01,
  author = {A.K. Lenstra and E.R. Verheul},
  title = {Selecting Cryptographic Key Sizes},
  journal = {Jour. of the International Association for Cryptologic Research},
  year = {2001},
  volume = {14},
  pages = {255-293},
  number = {4}
}

@ARTICLE{Pitts59,
  author = {Lettvin, J.Y. and Maturana, H.R. and McCulloch, W.S. and Pitts, W.H.},
  title = {What the Frog's Eye Tells the Frog's Brain},
  journal = {Proceedings of the IRE},
  year = {1959},
  volume = {47},
  pages = {1940--51},
  number = {11},
  owner = {christophe},
  timestamp = {2010.12.21}
}

@ARTICLE{Li75,
  author = {T. Y. Li and J. A. Yorke},
  title = {Period three implies chaos},
  journal = {Amer. Math. Monthly},
  year = {1975},
  volume = {82},
  pages = {985--992},
  number = {10},
  owner = {guyeux},
  timestamp = {27/01/2008}
}

@ARTICLE{Xiao10,
  author = {Li, Yantao and Deng, Shaojiang and Xiao, Di},
  title = {A novel Hash algorithm construction based on chaotic neural network},
  journal = {Neural Computing and Applications},
  year = {2010},
  pages = {1-9},
  affiliation = {Chongqing University College of Computer Science 400044 Chongqing
        China},
  issn = {0941-0643},
  keyword = {Computer Science},
  publisher = {Springer London}
}

@INPROCEEDINGS{Lin09,
  author = {Lin, Hua-Yi and Chiang, Tzu-Chiang},
  title = {Cooperative secure data aggregation in sensor networks using elliptic
        curve based cryptosystems},
  booktitle = {CDVE'09: Proceedings of the 6th international conference on Cooperative
        design, visualization, and engineering},
  year = {2009},
  pages = {384--387},
  address = {Berlin, Heidelberg},
  publisher = {Springer-Verlag},
  isbn = {3-642-04264-3, 978-3-642-04264-5},
  location = {Luxembourg, Luxembourg}
}

@INPROCEEDINGS{Liu2008,
  author = {Liu, An and Ning, Peng},
  title = {TinyECC: A Configurable Library for Elliptic Curve Cryptography in
        Wireless Sensor Networks},
  booktitle = {7th International Conference on Information Processing in Sensor
        Networks (IPSN 2008)},
  year = {2008},
  pages = {245--256},
  month = {April},
  citeulike-article-id = {3041699},
  howpublished = {SPOTS Track},
  keywords = {hagg},
  posted-at = {2008-07-25 05:25:05},
  priority = {2}
}

@ARTICLE{Liu2007bis,
  author = {Shao-Hui Liu and Hong-Xun Yao and Wen Gao and Yong-Liang Liu},
  title = {An image fragile watermark scheme based on chaotic image pattern
        and pixel-pairs},
  journal = {Applied Mathematics and Computation},
  year = {2007},
  volume = {185},
  pages = {869-882},
  owner = {guyeux},
  timestamp = {2008.10.07}
}

@INPROCEEDINGS{Liu07,
  author = {Liu, Zhen and Xi, Lifeng},
  title = {Image Information Hiding Encryption Using Chaotic Sequence},
  booktitle = {KES '07: Knowledge-Based Intelligent Information and Engineering
        Systems and the XVII Italian Workshop on Neural Networks on Proceedings
        of the 11th International Conference},
  year = {2007},
  pages = {202--208},
  address = {Berlin, Heidelberg},
  publisher = {Springer-Verlag},
  doi = {http://dx.doi.org/10.1007/978-3-540-74827-4_26},
  isbn = {978-3-540-74826-7},
  location = {Vietri sul Mare, Italy}
}

@ARTICLE{Liu2007,
  author = {Zhen Liu and Lifeng Xi},
  title = {Image Information Hiding Encryption Using Chaotic Sequence},
  journal = {LNAI},
  year = {2007},
  volume = {4693},
  pages = {202-208},
  owner = {guyeux},
  timestamp = {11/04/2008}
}

@ARTICLE{Lubachevsky86,
  author = {Lubachevsky, Boris and Mitra, Debasis},
  title = {A chaotic asynchronous algorithm for computing the fixed point of
        a nonnegative matrix of unit spectral radius},
  journal = {J. ACM},
  year = {1986},
  volume = {33},
  pages = {130--150},
  number = {1},
  address = {New York, NY, USA},
  doi = {http://doi.acm.org/10.1145/4904.4801},
  issn = {0004-5411},
  publisher = {ACM}
}

@ARTICLE{Larger10,
  author = {{L}arger, {L}. and {D}udley, {J}.{M}.},
  title = { {N}onlinear dynamics {O}ptoelectronic chaos},
  journal = {{N}ature },
  year = {2010},
  volume = {465 },
  pages = {41-42 },
  number = {7294 },
  month = {05},
  abstract = {{O}ptoelectronic circuits with delayed feedback provide a convenient
        bench-top platform to study a wide range of nonlinear dynamic systems,
        from ultrastable clocks to complex chaotic devices.},
  affiliation = {{F}ranche-{C}omt{\'e} {\'E}lectronique {M}{\'e}canique, {T}hermique
        et {O}ptique - {S}ciences et {T}echnologies - {FEMTO}-{ST} - {CNRS}
        : {UMR}6174 - {U}niversit{\'e} de {F}ranche-{C}omt{\'e} - {U}niversit{\'e}
        de {T}echnologie de {B}elfort-{M}ontbeliard - {E}cole {N}ationale
        {S}up{\'e}rieure de {M}{\'e}canique et des {M}icrotechniques },
  audience = {internationale },
  day = {05},
  doi = {10.1038/465041a },
  hal_id = {hal-00517696},
  language = {{A}nglais},
  url = {http://hal.archives-ouvertes.fr/hal-00517696/en/}
}

@INPROCEEDINGS{Mahoney00,
  author = {Mahoney, Matthew V.},
  title = {Fast Text Compression with Neural Networks},
  booktitle = {Proceedings of the Thirteenth International Florida Artificial Intelligence
        Research Society Conference},
  year = {2000},
  pages = {230--234},
  publisher = {AAAI Press},
  acmid = {707654},
  isbn = {1-57735-113-4},
  numpages = {5}
}

@INPROCEEDINGS{msp10:bl,
  author = {Makhoul, Abdallah and Saadi, Rachid and Pham, Congduc},
  title = {Risk Management in Intrusion Detection Applications with Wireless
        Video Sensor Networks},
  booktitle = {WCNC'10 IEEE Int. Conf.},
  year = {2010},
  pages = {***--***},
  address = {Sydney, Australia},
  month = apr,
  note = {To appear},
  classement = {*},
  equipe = {and},
  inhal = {no}
}

@ARTICLE{Malvar03,
  author = {H.S. Malvar and D. Florêncio},
  title = {Improved Spread Spectrum: A New Modulation Technique for Robust Watermarking},
  journal = {IEEE Trans. Signal Proceeding},
  year = {2003},
  volume = {53},
  pages = {898--905},
  owner = {christophe},
  timestamp = {2010.03.07}
}

@ARTICLE{Marsaglia2003,
  author = {G. Marsaglia},
  title = {Xorshift RNGs},
  journal = {Journal of Statistical Software},
  year = {2003},
  volume = {8(14)},
  pages = {1--6},
  owner = {qianxue},
  timestamp = {2009.10.28}
}

@ARTICLE{Marsaglia1996,
  author = {G. Marsaglia},
  title = {DIEHARD: a battery of tests of randomness.},
  journal = {http://stat.fsu.edu/~geo/diehard.html},
  year = {1996},
  owner = {qianxue},
  timestamp = {2009.11.09}
}

@ARTICLE{Simard07testu01:a,
    author = {Richard Simard and Université De Montréal},
    title = {TestU01: A C library for empirical testing of random number generators},
    journal = {ACM Transactions on Mathematical Software},
    year = {2007},
    pages = {2007}
}

@ARTICLE{DefiningChaos,
  author = {M. Martelli and M. Dang and T. Seph},
  title = {Defining chaos},
  journal = {Mathematics Magazine},
  year = {1998},
  volume = {71},
  pages = {112--122},
  owner = {christophe},
  timestamp = {2010.08.11}
}

@ARTICLE{Michel2007c,
  author = {Christian J Michel},
  title = {An analytical model of gene evolution with 9 mutation parameters:
        an application to the amino acids coded by the common circular code.},
  journal = {Bull Math Biol},
  year = {2007},
  volume = {69},
  pages = {677--698},
  number = {2},
  month = {Feb},
  abstract = {We develop here an analytical evolutionary model based on a trinucleotide
        mutation matrix 64 x 64 with nine substitution parameters associated
        with the three types of substitutions in the three trinucleotide
        sites. It generalizes the previous models based on the nucleotide
        mutation matrices 4 x 4 and the trinucleotide mutation matrix 64
        x 64 with three and six parameters. It determines at some time t
        the exact occurrence probabilities of trinucleotides mutating randomly
        according to these nine substitution parameters. An application of
        this model allows an evolutionary study of the common circular code
        [Formula: see text] of eukaryotes and prokaryotes and its 12 coded
        amino acids. The main property of this code [Formula: see text] is
        the retrieval of the reading frames in genes, both locally, i.e.
        anywhere in genes and in particular without a start codon, and automatically
        with a window of a few nucleotides. However, since its identification
        in 1996, amino acid information coded by [Formula: see text] has
        never been studied. Very unexpectedly, this evolutionary model demonstrates
        that random substitutions in this code [Formula: see text] and with
        particular values for the nine substitutions parameters retrieve
        after a certain time of evolution a frequency distribution of these
        12 amino acids very close to the one coded by the actual genes.},
  doi = {10.1007/s11538-006-9147-z},
  institution = {Equipe de Bioinformatique Théorique, LSIIT (UMR CNRS-ULP 7005), Université
        Louis Pasteur de Strasbourg, Pôle API, Boulevard Sébastien Brant,
        67400 Illkirch, France. michel@dpt-info.u-strasbg.fr},
  keywords = {Amino Acids, genetics; Codon, genetics; Eukaryotic Cells; Evolution,
        Molecular; Models, Genetic; Prokaryotic Cells},
  language = {eng},
  medline-pst = {ppublish},
  owner = {guyeux},
  pmid = {16952018},
  timestamp = {2011.05.05},
  url = {http://dx.doi.org/10.1007/s11538-006-9147-z}
}

@ARTICLE{Miellou75,
  author = {J.-C. Miellou},
  title = {Algorithmes de relaxation chaotique \`{a} retards},
  journal = {Rairo},
  year = {1975},
  volume = {R1},
  pages = {148-162},
  owner = {guyeux},
  timestamp = {2008.05.22}
}

@ARTICLE{Miellou75b,
  author = {Miellou, J.-C.},
  title = {Itérations chaotiques à retards, étude de la convergence dans le
        cas d'espaces partiellement ordonnés},
  journal = {C.R.A.S. Paris},
  year = {1975},
  volume = {280},
  pages = {233--236},
  owner = {christophe},
  timestamp = {2010.08.17}
}

@ARTICLE{Spiteri85,
  author = {Jean-Claude Miellou and Pierre Spitéri},
  title = {Un critère de convergence pour des méthodes générales de point fixe},
  journal = {Rairo -- Modélisation mathématique et analyse numérique},
  year = {1985},
  volume = {19},
  pages = {645--669},
  number = {4},
  owner = {christophe},
  timestamp = {2010.10.13}
}

@ARTICLE{Mooney08,
  author = {Aidan Mooney and John G. Keating and Ioannis Pitas},
  title = {A comparative study of chaotic and white noise signals in digital
        watermarking},
  journal = {Chaos, Solitons and Fractals},
  year = {2008},
  volume = {35},
  pages = {913-921},
  owner = {christophe},
  timestamp = {2010.03.01}
}

@ARTICLE{Nakashima2003,
  author = {Nakashima, Y. and Tachibana, R. and Babaguchi, N.},
  title = {Watermarked Movie Soundtrack Finds the Position of the Camcorder
        in a Theater},
  journal = {IEEE Transactions on Multimedia},
  year = {2009},
  note = {Accepted for future publication Multimedia}
}

@INCOLLECTION{springerlink:10.1007/978-3-642-04431-1_16,
  author = {Nelson, Michael and Nahapetian, Ani and Koushanfar, Farinaz and Potkonjak,
        Miodrag},
  title = {SVD-Based Ghost Circuitry Detection},
  booktitle = {Information Hiding},
  publisher = {Springer Berlin / Heidelberg},
  year = {2009},
  editor = {Katzenbeisser, Stefan and Sadeghi, Ahmad-Reza},
  volume = {5806},
  series = {Lecture Notes in Computer Science},
  pages = {221-234},
  note = {10.1007/978-3-642-04431-1_16},
  affiliation = {Computer Science Department, UCLA, Los Angeles, CA 90095, USA},
  url = {http://dx.doi.org/10.1007/978-3-642-04431-1_16}
}

@INPROCEEDINGS{Perez-Hernandez09,
  author = {P\'{e}rez-Hern\'{a}ndez, Luis Germ\'{a}n and Rodr\'{\i}guez-V\'{a}zquez,
        Katya and Gardu\~{n}o-Ju\'{a}rez, Ram\'{o}n},
  title = {Parallel particle swarm optimization applied to the protein folding
        problem},
  booktitle = {Proceedings of the 11th Annual conference on Genetic and evolutionary
        computation},
  year = {2009},
  series = {GECCO '09},
  pages = {1791--1792},
  address = {New York, NY, USA},
  publisher = {ACM},
  acmid = {1570163},
  isbn = {978-1-60558-325-9},
  keywords = {bioinformatics, biology and chemistry, combinatorial optimization,
        parallelization, swarm intelligence},
  location = {Montreal, Qu\&\#233;bec, Canada},
  numpages = {2}
}

@PHDTHESIS{Pellegrin1986,
  author = {D. Pellegrin},
  title = {Algorithmique discr\`{e}te et r\'{e}seaux d'automates},
  school = {Grenoble},
  year = {1986},
  owner = {guyeux},
  timestamp = {2008.05.22}
}

@ARTICLE{Peng2005,
  author = {F. Peng and S.-S. Qiu and M. Long},
  title = {One way Hash function construction based on two-dimensional hyperchaotic
        mappings},
  journal = {Acta Phys. Sinici.},
  year = {2005},
  volume = {54},
  pages = {98--104},
  owner = {guyeux},
  timestamp = {2009.01.16}
}

@INPROCEEDINGS{Perez06,
  author = {Luis Perez-Freire and F. Pérez-gonzalez and Pedro Comesaña},
  title = {Secret Dither Estimation in Lattice-Quantization Data Hiding: A Set-Membership
        Approach},
  booktitle = {Security, Steganography, and Watermarking of Multimedia Contents},
  year = {2006},
  editor = {Edward J. Delp and Ping W. Wong},
  address = {San Jose, California, USA},
  month = {January},
  organization = {SPIE},
  owner = {guyeux},
  timestamp = {2009.06.30}
}

@INPROCEEDINGS{Perez-Freire06,
  author = {Luis Perez-Freire and Pedro Comesana and Juan Ramon Troncoso-Pastoriza
        and Fernando Perez-Gonzalez},
  title = {Watermarking Security: a Survey},
  booktitle = {LNCS Transactions on Data Hiding and Multimedia Security},
  year = {2006},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@PROCEEDINGS{Peter07,
  title = {On Concealed Data Aggregation for WSNs},
  year = {2007},
  author = {Peter, Steffen and Piotrowski, Krzysztof and Langendoerfer, Peter},
  booktitle = {Consumer Communications and Networking Conference, 2007. CCNC 2007.
        4th IEEE},
  citeulike-article-id = {2281643},
  citeulike-linkout-0 = {http://dx.doi.org/10.1109/CCNC.2007.45},
  citeulike-linkout-1 = {http://ieeexplore.ieee.org/xpls/abs\_all.jsp?arnumber=4199133},
  doi = {10.1109/CCNC.2007.45},
  journal = {Consumer Communications and Networking Conference, 2007. CCNC 2007.
        4th IEEE},
  keywords = {hagg},
  pages = {192--196},
  posted-at = {2008-01-23 19:36:19},
  priority = {3},
  url = {http://dx.doi.org/10.1109/CCNC.2007.45}
}

@ARTICLE{pms11:ij,
  author = {Pham, Congduc and Makhoul, Abdallah and Saadi, Rachid},
  title = {Risk-based Adaptive Scheduling in Randomly Deployed Video Sensor
        Networks for Critical Surveillance Applications},
  journal = {Journal of Network and Computer Applications},
  year = {2011},
  volume = {*},
  pages = {***--***},
  number = {*},
  note = {Accepted manuscript. To appear},
  classement = {ACLI},
  equipe = {and},
  impact-factor = {1.111},
  inhal = {no},
  isi-acro = {J NETW COMPU APPL},
  publisher = {Springer}
}

@MISC{Poe,
  author = {Edgar Alan Poe},
  title = {The Raven},
  month = {April},
  year = {1839},
  note = {American Museum (Baltimore)},
  owner = {christophe},
  timestamp = {2010.11.23}
}

@ARTICLE{Perez-Freire2006:Security,
  author = {L. P{\'e}rez-Freire and F. P{\'e}rez-González and T. Furon and P.
        Comesaña},
  title = {Security of lattice-based data hiding against the known message attack},
  journal = {IEEE Trans. on Information Forensics and Security},
  year = {2006},
  volume = {1},
  pages = {421-439},
  number = {4},
  month = {dec},
  owner = {guyeux},
  timestamp = {2009.12.06}
}

@MISC{Quisquater02sidechannel,
  author = {J-J. Quisquater and D. Samyde and Université Catholique De Louvain
        and Groupe Crypto},
  title = {Side Channel Cryptanalysis},
  year = {2002}
}

@ARTICLE{Raynal2001,
  author = {Frédéric Raynal and Fabien A. P. Petitcolas and Caroline Fontaine},
  title = {Evaluation automatique des méthodes de tatouage},
  journal = {Traitement du signal},
  year = {2001},
  volume = {18},
  pages = {271-282},
  owner = {guyeux},
  timestamp = {2008.05.21}
}

@MISC{rijmen05,
  author = {Vincent Rijmen and Elisabeth Oswald},
  title = {Update on SHA-1},
  howpublished = {Cryptology ePrint Archive, Report 2005/010},
  year = {2005},
  note = {\url{http://eprint.iacr.org/}}
}

@BOOK{Robert,
  title = {Discrete Iterations, a Metric Study},
  publisher = {Springer-Verlag},
  year = {1986},
  editor = {Berlin Heidelberg New-York},
  author = {François Robert},
  volume = {6},
  series = {Series in Computational Mathematics}
}

@BOOK{Robert1986,
  title = {Discrete Iterations: A Metric Study},
  year = {1986},
  editor = {Springer-Verlag},
  author = {F. Robert},
  volume = {6},
  series = {Springer Series in Computational Mathematics},
  owner = {guyeux},
  timestamp = {17/02/2008}
}

@ARTICLE{Rudenko08,
  author = {Rudenko, O. and Snytkin, M.},
  title = {Image compression based on the neural network art},
  journal = {Cybernetics and Systems Analysis},
  year = {2008},
  volume = {44},
  pages = {797-802},
  affiliation = {Kharkov National University of Radio Electronics Kharkov Ukraine},
  issn = {1060-0396},
  issue = {6},
  keyword = {Computer Science},
  publisher = {Springer New York}
}

@PHDTHESIS{Ruette2001,
  author = {Sylvie Ruette},
  title = {Chaos en dynamique topologique, en particulier sur l'intervalle,
        mesures d'entropie maximale},
  school = {Université d'Aix-Marseille II},
  year = {2001},
  optmonth = {Novembre},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@MASTERSTHESIS{Saulnier02,
  author = {Boris Saulnier},
  title = {Entropie topologique},
  school = {DEA Sémantique, Preuves et Langages, Paris 7},
  year = {2002},
  owner = {christophe},
  timestamp = {2010.08.12}
}

@ARTICLE{Schmitz2001,
  author = {Roland Schmitz},
  title = {Use of chaotic dynamical systems in cryptography},
  journal = {Journal of Franklin Institute},
  year = {2001},
  volume = {338},
  pages = {429-441},
  owner = {guyeux},
  timestamp = {17/02/2008}
}

@BOOK{Schwartz80,
  title = {Analyse: topologie g\'{e}n\'{e}rale et analyse fonctionnelle},
  publisher = {Hermann},
  year = {1980},
  editor = {Hermann},
  author = {Laurent Schwartz},
  owner = {christophe},
  timestamp = {2010.09.15}
}

@ARTICLE{Shannon49,
  author = {Shannon, Claude E.},
  title = {Communication Theory of Secrecy Systems},
  journal = {Bell Systems Technical Journal},
  year = {1949},
  volume = {28},
  pages = {656--715},
  citeulike-article-id = {507362},
  keywords = {master, secrecy\_systems, teoria-informacao, theory\_communication,
        theory\_cryptography},
  owner = {guyeux},
  posted-at = {2006-02-16 23:24:09},
  priority = {2},
  timestamp = {2009.06.29}
}

@ARTICLE{Shmygelska05,
  author = {Shmygelska, Alena and Hoos, Holger},
  title = {An ant colony optimisation algorithm for the 2D and 3D hydrophobic
        polar protein folding problem},
  journal = {BMC Bioinformatics},
  year = {2005},
  volume = {6},
  pages = {30},
  number = {1},
  abstract = {BACKGROUND:The protein folding problem is a fundamental problems in
        computational molecular biology and biochemical physics. Various
        optimisation methods have been applied to formulations of the ab-initio
        folding problem that are based on reduced models of protein structure,
        including Monte Carlo methods, Evolutionary Algorithms, Tabu Search
        and hybrid approaches. In our work, we have introduced an ant colony
        optimisation (ACO) algorithm to address the non-deterministic polynomial-time
        hard (NP-hard) combinatorial problem of predicting a protein's conformation
        from its amino acid sequence under a widely studied, conceptually
        simple model - the 2-dimensional (2D) and 3-dimensional (3D) hydrophobic-polar
        (HP) model.RESULTS:We present an improvement of our previous ACO
        algorithm for the 2D HP model and its extension to the 3D HP model.
        We show that this new algorithm, dubbed ACO-HPPFP-3, performs better
        than previous state-of-the-art algorithms on sequences whose native
        conformations do not contain structural nuclei (parts of the native
        fold that predominantly consist of local interactions) at the ends,
        but rather in the middle of the sequence, and that it generally finds
        a more diverse set of native conformations.CONCLUSIONS:The application
        of ACO to this bioinformatics problem compares favourably with specialised,
        state-of-the-art methods for the 2D and 3D HP protein folding problem;
        our empirical results indicate that our rather simple ACO algorithm
        scales worse with sequence length but usually finds a more diverse
        ensemble of native states. Therefore the development of ACO algorithms
        for more complex and realistic models of protein structure holds
        significant promise.},
  doi = {10.1186/1471-2105-6-30},
  issn = {1471-2105},
  pubmedid = {15710037}
}

@OTHER{Shmygelska2005Feb,
  __markedentry = {[christophe]},
  abstract = {Abstract Background The protein folding problem is a fundamental problems
        in computational molecular biology and biochemical physics. Various
        optimisation methods have been applied to formulations of the ab-initio
        folding problem that are based on reduced models of protein structure,
        including Monte Carlo methods, Evolutionary Algorithms, Tabu Search
        and hybrid approaches. In our work, we have introduced an ant colony
        optimisation (ACO) algorithm to address the non-deterministic polynomial-time
        hard (NP-hard) combinatorial problem of predicting a protein's conformation
        from its amino acid sequence under a widely studied, conceptually
        simple model – the 2-dimensional (2D) and 3-dimensional (3D) hydrophobic-polar
        (HP) model. Results We present an improvement of our previous ACO
        algorithm for the 2D HP model and its extension to the 3D HP model.
        We show that this new algorithm, dubbed ACO-HPPFP-3, performs better
        than previous state-of-the-art algorithms on sequences whose native
        conformations do not contain structural nuclei (parts of the native
        fold that predominantly consist of local interactions) at the ends,
        but rather in the middle of the sequence, and that it generally finds
        a more diverse set of native conformations. Conclusions The application
        of ACO to this bioinformatics problem compares favourably with specialised,
        state-of-the-art methods for the 2D and 3D HP protein folding problem;
        our empirical results indicate that our rather simple ACO algorithm
        scales worse with sequence length but usually finds a more diverse
        ensemble of native states. Therefore the development of ACO algorithms
        for more complex and realistic models of protein structure holds
        significant promise.},
  author = {Shmygelska, Alena and Hoos, Holger H},
  journal = {BMC Bioinformatics. 2005 Feb 14},
  number = {1},
  owner = {christophe},
  pages = {30},
  timestamp = {2011.01.24},
  title = {An ant colony optimisation algorithm for the 2D and 3D hydrophobic
        polar protein folding problem},
  volume = {6},
  year = {2005 Feb}
}

@ARTICLE{Shujun1,
  author = {Li Shujun and Li Qi and Li Wenmin and Mou Xuanqin and Cai Yuanlong},
  title = {Statistical Properties of Digital Piecewise Linear Chaotic Maps and
        Their Roles in Cryptography and Pseudo-Random Coding},
  journal = {Proceedings of the 8th IMA International Conference on Cryptography
        and Coding},
  year = {2001},
  volume = {1},
  pages = {205--221},
  owner = {christophe},
  timestamp = {2010.03.06}
}

@INPROCEEDINGS{Simmons83,
  author = {Gustavus J. Simmons},
  title = {The Prisoners' Problem and the Subliminal Channel},
  booktitle = {Advances in Cryptology, Proc. CRYPTO'83},
  year = {1984},
  pages = {51--67},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@ARTICLE{Solak2004389,
  author = {Ercan Solak},
  title = {On the security of a class of discrete-time chaotic cryptosystems},
  journal = {Physics Letters A},
  year = {2004},
  volume = {320},
  pages = {389 - 395},
  number = {5-6},
  doi = {DOI: 10.1016/j.physleta.2003.11.008},
  issn = {0375-9601},
  keywords = {Communication using chaos},
  owner = {guyeux},
  timestamp = {2009.12.12},
  url = {http://www.sciencedirect.com/science/article/B6TVM-4B22RC9-2/2/99a0af737c9b6ba8af47ae4d3c7a326d}
}

@PHDTHESIS{Spiteri74,
  author = {Pierre Spitéri},
  title = {Contribution à l'étude de la stabilite au sens de liapounov de certains
        systemes differentiels non lineaires},
  school = {Université de Franche-Comté},
  year = {1974},
  owner = {christophe},
  timestamp = {2010.10.13}
}

@BOOK{Stewart1989,
  title = {Does God Play Dices ?: the mathematics of chaos},
  publisher = {Penguin},
  year = {1989},
  author = {Ian Stewart},
  owner = {guyeux},
  timestamp = {2008.01.02}
}

@BOOK{Stinson02,
  title = {Cryptography: Theory and Practice, Second Edition},
  publisher = {{Chapman \& Hall/CRC}},
  year = {2002},
  author = {Stinson, Douglas R.},
  month = {February},
  abstract = {{Douglas R. Stinson's <I>Cryptography: Theory and Practice</I> is
        a mathematically intensive examination of cryptography, including
        ciphers, the Data Encryption Standard (DES), public key cryptography,
        one-way hash functions, and digital signatures. Stinson's explication
        of "zero-sum proofs"--a process by which one person lets another
        person know that he or she has a password without actually revealing
        any information--is especially good.<P> If you are new to the math
        behind cryptography but want to tackle it, the author covers all
        of the required background to understand the real mathematics here.
        <I>Cryptography</I> includes extensive exercises with each chapter
        and makes an ideal introduction for any math-literate person willing
        to get acquainted with this material.} {<P>Major advances over the
        last five years precipitated this major revision of the bestselling
        Cryptography: Theory and Practice. With more than 40 percent new
        or updated material, the second edition now provides an even more
        comprehensive treatment of modern cryptography. It focuses on the
        new Advanced Encryption Standards and features an entirely new chapter
        on that subject. Another new chapter explores the applications of
        secret sharing schemes, including ramp schemes, visual cryptography,
        threshold cryptography, and broadcast encryption. This is an ideal
        introductory text for both computer science and mathematics students
        and a valuable reference for professionals.</P>}},
  citeulike-article-id = {2401855},
  day = {27},
  howpublished = {Hardcover},
  isbn = {1584882069},
  keywords = {security},
  posted-at = {2008-02-20 08:28:49},
  priority = {0},
  url = {http://www.amazon.com/exec/obidos/redirect?tag=citeulike07-20\&path=ASIN/1584882069}
}

@INPROCEEDINGS{Takana90,
  author = {K. Tanaka and Y. Nakamura and K. Matsui},
  title = {Embedding Secret Information into a Dithered Multi-level Image},
  booktitle = {IEEE Military Communications Conference},
  year = {1990},
  owner = {christophe},
  timestamp = {2010.08.05}
}

@PHDTHESIS{ElTarazi81,
  author = {M. N. El Tarazi},
  title = {Contraction et ordre partiel pour l'étude d'algorithmes synchrones
        et asynchrones en analyse numérique},
  school = {Faculté des Sciences et Techniques de l'Université de Franche-Comté,
        Besançon},
  year = {1981},
  owner = {christophe},
  timestamp = {2010.08.17}
}

@INPROCEEDINGS{Unger93,
  author = {Unger, Ron and Moult, John},
  title = {Genetic Algorithm for 3D Protein Folding Simulations},
  booktitle = {Proceedings of the 5th International Conference on Genetic Algorithms},
  year = {1993},
  pages = {581--588},
  address = {San Francisco, CA, USA},
  publisher = {Morgan Kaufmann Publishers Inc.},
  acmid = {657747},
  isbn = {1-55860-299-2},
  numpages = {8}
}

@MISC{Van93electronicwater,
  author = {Tirkel Rankin Van},
  title = {Electronic Water Mark},
  year = {1993}
}

@ARTICLE{Venkatesan2007397,
  author = {R.C. Venkatesan},
  title = {Encryption of covert information into multiple statistical distributions},
  journal = {Physics Letters A},
  year = {2007},
  volume = {370},
  pages = {397 - 404},
  number = {5-6},
  doi = {DOI: 10.1016/j.physleta.2007.05.117},
  issn = {0375-9601},
  keywords = {Statistical encryption/decryption},
  owner = {guyeux},
  timestamp = {2009.12.12},
  url = {http://www.sciencedirect.com/science/article/B6TVM-4P4FV2M-1/2/cd11a2ec144526e3c4552d2a7e7906cc}
}

@ARTICLE{pitas,
  author = {G. Voyatzis and I. Pitas},
  title = {Chaotic watermarks for embedding in the spatial digital image domain},
  journal = {Proceedings of IEEE ICIP},
  year = {1998},
  volume = {2},
  pages = {432-436},
  owner = {christophe},
  timestamp = {2010.03.06}
}

@INCOLLECTION{Wagner03,
  author = {Wagner, David},
  title = {Cryptanalysis of an Algebraic Privacy Homomorphism},
  booktitle = {Information Security},
  publisher = {Springer Berlin, Heidelberg},
  year = {2003},
  volume = {2851},
  series = {Lecture Notes in Computer Science},
  pages = {234-239},
  abstract = {We use linear algebra to show that an algebraic privacy homomorphism
        proposed by Domingo-Ferrer is insecure for some parameter settings.},
  affiliation = {University of California, Berkeley USA}
}

@INPROCEEDINGS{Wagner03cryptanalysisof,
  author = {David Wagner},
  title = {Cryptanalysis of an Algebraic Privacy Homomorphism},
  booktitle = {Proc. Sixth Information Security Conf. (ISC03},
  year = {2003},
  pages = {234--239}
}

@ARTICLE{Wang_ellipticcurve,
  author = {Haodong Wang and Bo Sheng and Qun Li},
  title = {Elliptic curve cryptography-based access control in sensor networks},
  journal = {Int. J. Security and Networks}
}

@INPROCEEDINGS{wbg10:ip,
  author = {Wang, Qianxue and Bahi, Jacques M. and Guyeux, Christophe and Fang,
        Xiaole},
  title = {Randomness quality of {CI} chaotic generators. Application to Internet
        security},
  booktitle = {INTERNET'2010. The 2nd Int. Conf. on Evolving Internet},
  year = {2010},
  pages = {125--130},
  address = {Valencia, Spain},
  month = sep,
  publisher = {IEEE Computer Society Press},
  note = {Best Paper award},
  classement = {ACTI},
  domainehal = {INFO:INFO_DC, INFO:INFO_CR, INFO:INFO_MO},
  equipe = {and},
  inhal = {no}
}

@ARTICLE{Wang2003,
  author = {X. M. Wang and J. S. Zhang and W. F. Zhang},
  title = {One-way hash function construction based on the extended chaotic
        maps switch},
  journal = {Acta Phys. Sinici.},
  year = {2003},
  volume = {52, No. 11},
  pages = {2737--2742},
  owner = {guyeux},
  timestamp = {2009.01.16}
}

@ARTICLE{Girao06,
  author = {Westhoff, Dirk and Girao, Joao and Acharya, Mithun},
  title = {Concealed Data Aggregation for Reverse Multicast Traffic in Sensor
        Networks: Encryption, Key Distribution, and Routing Adaptation},
  journal = {IEEE Transactions on Mobile Computing},
  year = {2006},
  volume = {5},
  pages = {1417--1431},
  number = {10},
  address = {Piscataway, NJ, USA},
  doi = {http://dx.doi.org/10.1109/TMC.2006.144},
  issn = {1536-1233},
  publisher = {IEEE Educational Activities Department}
}

@MISC{web:lyapunov,
  author = {Wikipédia},
  title = {Exposant de Lyapunov -- Site web d'André Lévesque},
  year = {2010},
  note = {[En ligne; Page disponible le 9-septembre-2010]},
  url = {\url{http://math.cmaisonneuve.qc.ca/alevesque/chaos_fract/Lyapunov/Exposant.html}}
}

@MISC{wiki:complet,
  author = {Wikipédia},
  title = {Espace complet --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 9-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Espace_complet&oldid=52734266}}
}

@MISC{wiki:densite,
  author = {Wikipédia},
  title = {Densité (mathématiques) --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 8-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Densit%C3%A9_(math%C3%A9matiques)&oldid=53938121}}
}

@MISC{wiki:fisher,
  author = {Wikipédia},
  title = {Information de Fisher --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 5-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Information_de_Fisher&oldid=52877871}}
}

@MISC{wiki:Kerkhoffs,
  author = {Wikipédia},
  title = {Principe de Kerckhoffs --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 20-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Principe_de_Kerckhoffs&oldid=52133114}}
}

@MISC{wiki:sarkovskii,
  author = {Wikipédia},
  title = {Théorème de Sarkovskii --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 8-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Th%C3%A9or%C3%A8me_de_Sarkovskii&oldid=54196167}}
}

@MISC{wiki:steganographie,
  author = {Wikipédia},
  title = {Stéganographie --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 5-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=St%C3%A9ganographie&oldid=54724435}}
}

@MISC{wiki:tatouage,
  author = {Wikipédia},
  title = {Tatouage numérique --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 5-août-2010]},
  url = {https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Tatouage_num%C3%A9rique&oldid=55484940}
}

@MISC{wiki:testsHypothese,
  author = {Wikipédia},
  title = {Test d'hypothèse --- Wikipédia{,} l'encyclopédie libre},
  year = {2010},
  note = {[En ligne; Page disponible le 5-août-2010]},
  url = {\url{https://secure.wikimedia.org/wikipedia/fr/w/index.php?title=Test_d%27hypoth%C3%A8se&oldid=55344108}}
}

@ARTICLE{Wu2007bis,
  author = {Xianyong Wu and Zhi-Hong Guan},
  title = {A novel digital watermark algorithm based on chaotic maps},
  journal = {Physics Letters A},
  year = {2007},
  volume = {365},
  pages = {403 - 406},
  number = {5-6},
  doi = {DOI: 10.1016/j.physleta.2007.01.034},
  issn = {0375-9601},
  keywords = {Watermarking},
  url = {http://www.sciencedirect.com/science/article/B6TVM-4MY0MF3-8/2/0b4d1298fa84337d2e59b3fefe26f583}
}

@INPROCEEDINGS{Wu2007,
  author = {Wu, Xianyong and Guan, Zhi-Hong and Wu, Zhengping},
  title = {A Chaos Based Robust Spatial Domain Watermarking Algorithm},
  booktitle = {ISNN '07: Proceedings of the 4th international symposium on Neural
        Networks},
  year = {2007},
  pages = {113--119},
  address = {Berlin, Heidelberg},
  publisher = {Springer-Verlag},
  doi = {http://dx.doi.org/10.1007/978-3-540-72393-6_15},
  isbn = {978-3-540-72392-9},
  location = {Nanjing, China}
}

@ARTICLE{Xiao20092288,
  author = {Di Xiao and Xiaofeng Liao and Yong Wang},
  title = {Parallel keyed hash function construction based on chaotic neural
        network},
  journal = {Neurocomputing},
  year = {2009},
  volume = {72},
  pages = {2288 - 2296},
  number = {10-12},
  note = {Lattice Computing and Natural Computing (JCIS 2007) / Neural Networks
        in Intelligent Systems Designn (ISDA 2007)},
  abstract = {Recently, various hash functions based on chaos or neural networks
        were proposed. Nevertheless, none of them works efficiently in parallel
        computing environment. In this paper, an algorithm for parallel keyed
        hash function construction based on chaotic neural network is proposed.
        The mechanism of changeable-parameter and self-synchronization establishes
        a close relation between the hash value bit and message, and the
        algorithm structure ensures the uniform sensitivity of the hash value
        to the message blocks at different positions. The proposed algorithm
        can satisfy the performance requirements of hash function. These
        properties make it a promising choice for hashing on parallel computing
        platform.},
  issn = {0925-2312},
  keywords = {Chaotic neural network}
}

@ARTICLE{Xiao20094346,
  author = {Di Xiao and Xiaofeng Liao and Yong Wang},
  title = {Improving the security of a parallel keyed hash function based on
        chaotic maps},
  journal = {Physics Letters A},
  year = {2009},
  volume = {373},
  pages = {4346 - 4353},
  number = {47},
  issn = {0375-9601},
  keywords = {Hash function},
  owner = {guyeux},
  timestamp = {2009.12.12}
}

@ARTICLE{Xiao20102254,
  author = {Di Xiao and Frank Y. Shih and Xiaofeng Liao},
  title = {A chaos-based hash function with both modification detection and
        localization capabilities},
  journal = {Communications in Nonlinear Science and Numerical Simulation},
  year = {2010},
  volume = {15},
  pages = {2254 - 2261},
  number = {9},
  abstract = {Recently, a variety of chaos-based hash functions have been proposed.
        Nevertheless, none of them can realize modification localization.
        In this paper, a hash function with both modification detection and
        localization capabilities is proposed, which can also support the
        parallel processing mode. By using the mechanism of changeable-parameter
        and self-synchronization, the keystream can establish a close relation
        with the algorithm key, the content, and the order of each message
        unit. Theoretical analysis and computer simulation indicate that
        the proposed algorithm can satisfy the performance requirements of
        hash functions.},
  issn = {1007-5704},
  keywords = {Hash function}
}

@INPROCEEDINGS{Yu06,
  author = {Yu, Yu and Leiwo, Jussipekka and Premkumar, Benjamin},
  title = {A Study on the Security of Privacy Homomorphism},
  booktitle = {ITNG '06: Proceedings of the Third International Conference on Information
        Technology: New Generations},
  year = {2006},
  pages = {470--475},
  address = {Washington, DC, USA},
  publisher = {IEEE Computer Society},
  doi = {http://dx.doi.org/10.1109/ITNG.2006.19},
  isbn = {0-7695-2497-4}
}

@ARTICLE{Zhang2008658,
  author = {Wei Zhang and Yonghe Liu and Sajal K. Das and Pradip De},
  title = {Secure data aggregation in wireless sensor networks: A watermark
        based authentication supportive approach},
  journal = {Pervasive and Mobile Computing},
  year = {2008},
  volume = {4},
  pages = {658 - 680},
  number = {5},
  doi = {DOI: 10.1016/j.pmcj.2008.05.005},
  issn = {1574-1192},
  keywords = {Wireless sensor networks},
  url = {http://www.sciencedirect.com/science/article/B7MF1-4SKB3MD-1/2/b73948dcaa3eb63a2c21d09041882625}
}

@ARTICLE{Zhang2005,
  author = {Zhang, Yang and Arakaki, Adrian K. and Skolnick, Jeffrey},
  title = {TASSER: An automated method for the prediction of protein tertiary
        structures in CASP6},
  journal = {Proteins},
  year = {2005},
  volume = {61},
  pages = {91--98},
  number = {S7},
  issn = {1097-0134},
  keywords = {comparative modeling, threading, ab initio prediction, TASSER, PROSPECTOR_3},
  owner = {christophe},
  publisher = {Wiley Subscription Services, Inc., A Wiley Company},
  timestamp = {2011.01.22},
  url = {http://dx.doi.org/10.1002/prot.20724}
}

@ARTICLE{Zhou1997429,
  author = {Chang-song Zhou and Tian-lun Chen},
  title = {Extracting information masked by chaos and contaminated with noise:
        Some considerations on the security of communication approaches using
        chaos},
  journal = {Physics Letters A},
  year = {1997},
  volume = {234},
  pages = {429 - 435},
  number = {6},
  issn = {0375-9601},
  keywords = {Communication},
  owner = {guyeux},
  timestamp = {2009.12.12}
}

@ARTICLE{Zhou96,
  author = {Zhou, Huai-bei and Wang, Lu},
  title = {Chaos in Biomolecular Dynamics},
  journal = {The Journal of Physical Chemistry},
  year = {1996},
  volume = {100},
  pages = {8101-8105},
  number = {20},
  doi = {10.1021/jp953409x}
}

@PROCEEDINGS{DBLP:conf/iwdw/2005,
  title = {IWDW'05: 4th International Workshop on Digital Watermarking},
  year = {2005},
  editor = {Mauro Barni and Ingemar J. Cox and Ton Kalker and Hyoung Joong Kim},
  volume = {3710},
  series = {Lecture Notes in Computer Science},
  address = {Siena, Italy},
  publisher = {Springer},
  month = {September 15-17},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {IWDW},
  isbn = {3-540-28768-X},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@PROCEEDINGS{DBLP:conf/ih/2006,
  title = {IH 2006: Information Hiding, 8th International Workshop},
  year = {2007},
  editor = {Jan Camenisch and Christian S. Collberg and Neil F. Johnson and Phil
        Sallee},
  volume = {4437},
  series = {Lecture Notes in Computer Science},
  address = {Alexandria, VA, USA},
  publisher = {Springer},
  month = {July},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {Information Hiding},
  isbn = {978-3-540-74123-7},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@PROCEEDINGS{DBLP:conf/ih/2007,
  title = {Information Hiding, 9th International Workshop, IH 2007, Saint Malo,
        France, June 11-13, 2007, Revised Selected Papers},
  year = {2008},
  editor = {Teddy Furon and Fran\c{c}ois Cayre and Gwena{\"e}l J. Do{\"e}rr and
        Patrick Bas},
  volume = {4567},
  series = {Lecture Notes in Computer Science},
  publisher = {Springer},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {Information Hiding},
  isbn = {978-3-540-77369-6},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@PROCEEDINGS{DBLP:conf/iccsa/2006-1,
  title = {Computational Science and Its Applications - ICCSA 2006, International
        Conference, Glasgow, UK, May 8-11, 2006, Proceedings, Part I},
  year = {2006},
  editor = {Marina L. Gavrilova and Osvaldo Gervasi and Vipin Kumar and Chih
        Jeng Kenneth Tan and David Taniar and Antonio Lagan{\`a} and Youngsong
        Mun and Hyunseung Choo},
  volume = {3980},
  series = {Lecture Notes in Computer Science},
  publisher = {Springer},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {ICCSA (1)},
  isbn = {3-540-34070-X}
}

@PROCEEDINGS{DBLP:conf/secrypt/2010,
  title = {SECRYPT 2010 - Proceedings of the International Conference on Security
        and Cryptography, Athens, Greece, July 26-28, 2010, SECRYPT is part
        of ICETE - The International Joint Conference on e-Business and Telecommunications},
  year = {2010},
  editor = {Sokratis K. Katsikas and Pierangela Samarati},
  publisher = {SciTePress},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {SECRYPT},
  isbn = {978-989-8425-18-8}
}

@BOOK{Katzenbeisser00,
  title = {Information Hiding Techniques for Steganography and Digital Watermarking},
  publisher = {Artech House, Inc.},
  year = {2000},
  editor = {Katzenbeisser, Stefan and Petitcolas, Fabien A.},
  address = {Norwood, MA, USA},
  isbn = {1580530354}
}

@PROCEEDINGS{DBLP:conf/ih/1999,
  title = {IH'99: 3rd International Workshop on Information Hiding},
  year = {2000},
  editor = {Andreas Pfitzmann},
  volume = {1768},
  series = {Lecture Notes in Computer Science},
  address = {Dresden, Germany},
  publisher = {Springer},
  month = {September 29 - October 1.},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {Information Hiding},
  isbn = {3-540-67182-X},
  owner = {guyeux},
  timestamp = {2009.06.29}
}

@PROCEEDINGS{DBLP:conf/indocrypt/2000,
  title = {Progress in Cryptology - INDOCRYPT 2000, First International Conference
        in Cryptology in India, Calcutta, India, December 10-13, 2000, Proceedings},
  year = {2000},
  editor = {Bimal K. Roy and Eiji Okamoto},
  volume = {1977},
  series = {Lecture Notes in Computer Science},
  publisher = {Springer},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {INDOCRYPT},
  isbn = {3-540-41452-5}
}

@BOOK{DBLP:reference/icsec/2010,
  title = {Handbook of Information and Communication Security},
  publisher = {Springer},
  year = {2010},
  editor = {Peter P. Stavroulakis and Mark Stamp},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {Handbook of Information and Communication Security},
  ee = {http://dx.doi.org/10.1007/978-3-642-04117-4},
  isbn = {978-3-642-04116-7}
}

@PROCEEDINGS{DBLP:conf/isnn/2004-2,
  title = {Advances in Neural Networks - ISNN 2004, International Symposium
        on Neural Networks, Dalian, China, August 19-21, 2004, Proceedings,
        Part II},
  year = {2004},
  editor = {Fuliang Yin and Jun Wang and Chengan Guo},
  volume = {3174},
  series = {Lecture Notes in Computer Science},
  publisher = {Springer},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {ISNN (2)},
  isbn = {3-540-22843-8}
}

@PROCEEDINGS{DBLP:conf/adhocnets/2010,
  title = {Ad Hoc Networks - Second International Conference, ADHOCNETS 2010,
        Victoria, BC, Canada, August 18-20, 2010, Revised Selected Papers},
  year = {2010},
  editor = {Jun Zheng and David Simplot-Ryl and Victor C. M. Leung},
  volume = {49},
  series = {Lecture Notes of the Institute for Computer Sciences, Social Informatics
        and Telecommunications Engineering},
  publisher = {Springer},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {ADHOCNETS},
  ee = {http://dx.doi.org/10.1007/978-3-642-17994-5},
  isbn = {978-3-642-17993-8}
}

@INPROCEEDINGS{,
  owner = {guyeux},
  timestamp = {2011.03.29}
}

@MISC{Delicious,
  title = {Delicious social bookmarking, http://delicious.com/},
  comment = {http://delicious.com/},
  type = {web page},
  url = {http://delicious.com/}
}

@MISC{Frick,
  title = {The Frick Collection, http://www.frick.org/},
  comment = {http://www.frick.org/},
  type = {web page},
  url = {http://www.frick.org/}
}

@PROCEEDINGS{2010,
  title = {Proceedings of the IEEE Congress on Evolutionary Computation, CEC
        2010, Barcelona, Spain, 18-23 July 2010},
  year = {2010},
  publisher = {IEEE},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {IEEE Congress on Evolutionary Computation}
}

@PROCEEDINGS{DBLP:conf/cec/2010,
  title = {Proceedings of the IEEE Congress on Evolutionary Computation, CEC
        2010, Barcelona, Spain, 18-23 July 2010},
  year = {2010},
  publisher = {IEEE},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {IEEE Congress on Evolutionary Computation}
}

@PROCEEDINGS{DBLP:conf/date/2010,
  title = {Design, Automation and Test in Europe, DATE 2010, Dresden, Germany,
        March 8-12, 2010},
  year = {2010},
  publisher = {IEEE},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {DATE}
}

@PROCEEDINGS{DBLP:conf/cse/2009,
  title = {Proceedings IEEE CSE'09, 12th IEEE International Conference on Computational
        Science and Engineering, August 29-31, 2009, Vancouver, BC, Canada},
  year = {2009},
  publisher = {IEEE Computer Society},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {CSE}
}

@PROCEEDINGS{DBLP:conf/icumt/2009,
  title = {Proceedings of the International Conference on Ultra Modern Telecommunications,
        ICUMT 2009, 12-14 October 2009, St. Petersburg, Russia},
  year = {2009},
  publisher = {IEEE},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {ICUMT}
}

@PROCEEDINGS{DBLP:conf/focs/2008,
  title = {49th Annual IEEE Symposium on Foundations of Computer Science, FOCS
        2008, October 25-28, 2008, Philadelphia, PA, USA},
  year = {2008},
  publisher = {IEEE Computer Society},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  booktitle = {FOCS}
}

@comment{jabref-meta: selector_publisher:}

@comment{jabref-meta: selector_author:}

@comment{jabref-meta: selector_journal:}

@comment{jabref-meta: selector_keywords:Chaos;Entropie Topologique;Tip




@InProceedings{Pang:2008:cec,
  author =      "Wai-Man Pang and Tien-Tsin Wong and Pheng-Ann Heng",
  title =       "Generating Massive High-Quality Random Numbers using
                 {GPU}",
  booktitle =   "2008 IEEE World Congress on Computational
                 Intelligence",
  year =        "2008",
  editor =      "Jun Wang",
  address =     "Hong Kong",
  organization = "IEEE Computational Intelligence Society",
  publisher =   "IEEE Press",

}

@Article{LEcuyerS07,
  title =       "Test{U01}: {A} {C} library for empirical testing of
                 random number generators",
  author =      "Pierre L'Ecuyer and Richard J. Simard",
  journal =     "ACM Trans. Math. Softw",
  year =        "2007",
  number =      "4",
  volume =      "33",
  bibdate =     "2007-11-06",
  bibsource =   "DBLP,
                 http://dblp.uni-trier.de/db/journals/toms/toms33.html#LEcuyerS07",
  URL =         "http://doi.acm.org/10.1145/1268776.1268777",
}

@Article{ZRKB10,
        author =                         {A. Zhmurov, K. Rybnikov, Y. Kholodov, and V. Barsegov},
        title =                          {Generation of Random Numbers on Graphics Processors: Forced Indentation In Silico of the Bacteriophage HK97},
        journal =                {J. Phys. Chem. B},
        year =                           {2011},
        volume =         {115},
        number =         {18},
        pages =                  {5278--5288},
}



@comment {regarder : Pseudo-Random Number Generation for Brownian Dynamics and Dissipative Particle Dynamics Simulations on GPU Devices}
@comment {CL Phillips, JA Anderson… - Journal of Computational Physics, 2011 - Elsevier}

@InProceedings{conf/fpga/ThomasHL09,
  title =       "A comparison of {CPU}s, {GPU}s, {FPGA}s, and massively
                 parallel processor arrays for random number
                 generation",
  author =      "David B. Thomas and Lee W. Howes and Wayne Luk",
booktitle =     "Proceedings of the {ACM}/{SIGDA} 17th International
                 Symposium on Field Programmable Gate Arrays, {FPGA}
                 2009, Monterey, California, {USA}, February 22-24,
                 2009",
  bibdate =     "2010-06-29",
  publisher =   "ACM",
  year =        "2009",
  editor =      "Paul Chow and Peter Y. K. Cheung",
  ISBN =        "978-1-60558-410-2",
  pages =       "63--72",
  URL =         "http://doi.acm.org/10.1145/1508128.1508139",
}



@InProceedings{Jenkins96,
  author =      "Jenkins",
  title =       "{ISAAC}",
  booktitle =   "IWFSE: International Workshop on Fast Software
                 Encryption, LNCS",
  year =        "1996",
}

@manual{Nvid10,
 author = {Nvidia},
 title = {Cuda cublas library},
 year = {2011},
 Note = {Version 4.0},
 }

@manual{curand11,
 author = {Nvidia},
 title = {Curand library},
 year = {2011},
 Note = {Version 4.0},
 }



@Article{BBS,
        author =                         {Lenore Blum and Manuel Blum and Michael Shub},
        title =                          {A Simple Unpredictable Pseudo-Random Number Generator},
        journal =                {SIAM Journal on Computing},
        year =                           {1986},
        volume =         {15},
        pages =                  {364--383},
}